Role of the normal gut microbiota

Structure, function and diversity of the healthy human microbiome

The Human Microbiome Project Consortium (2012) · Nature · doi:10.1038/nature11234 · Cited by 11,726

A human gut microbial gene catalogue established by metagenomic sequencing

MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature · doi:10.1038/nature08821 · Cited by 11,624

Diet rapidly and reproducibly alters the human gut microbiome

David, L. A., Maurice, C. F., Carmody, R. N., Gootenberg, D. B., Button, J. E., Wolfe, B. E., Ling, A. V., Devlin, A. S., Varma, Y., Fischbach, M. A., et al. (2014) · Nature · doi:10.1038/nature12820 · Cited by 10,100

Pattern Recognition Receptors and Inflammation

Takeuchi, O., & Akira, S. (2010) · Cell · doi:10.1016/j.cell.2010.01.022 · Cited by 8,895

Human gut microbes associated with obesity

Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785

Human gut microbiome viewed across age and geography

Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815

Enterotypes of the human gut microbiome

MetaHIT Consortium (additional members), Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., et al. (2011) · Nature · doi:10.1038/nature09944 · Cited by 7,548

Changes of Intestinal Functions in Liver Cirrhosis

Fukui, H., & Wiest, R. (2016) · Inflammatory Intestinal Diseases · doi:10.1159/000444436 · Cited by 6,820

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., Collini, S., Pieraccini, G., & Lionetti, P. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005963107 · Cited by 5,579

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

Furusawa, Y., Obata, Y., Fukuda, S., Endo, T. A., Nakato, G., Takahashi, D., Nakanishi, Y., Uetake, C., Kato, K., Kato, T., et al. (2013) · Nature · doi:10.1038/nature12721 · Cited by 5,549

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic T reg Cell Homeostasis

Smith, P. M., Howitt, M. R., Panikov, N., Michaud, M., Gallini, C. A., Bohlooly-Y, M., Glickman, J. N., & Garrett, W. S. (2013) · Science · doi:10.1126/science.1241165 · Cited by 5,413

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation

Arpaia, N., Campbell, C., Fan, X., Dikiy, S., van der Veeken, J., deRoos, P., Liu, H., Cross, J. R., Pfeffer, K., Coffer, P. J., et al. (2013) · Nature · doi:10.1038/nature12726 · Cited by 4,838

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

Dominguez-Bello, M. G., Costello, E. K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., & Knight, R. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1002601107 · Cited by 4,774

Richness of human gut microbiome correlates with metabolic markers

Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, M., Batto, J.-M., Kennedy, S., et al. (2013) · Nature · doi:10.1038/nature12506 · Cited by 4,662

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

Frank, D. N., St. Amand, A. L., Feldman, R. A., Boedeker, E. C., Harpaz, N., & Pace, N. R. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0706625104 · Cited by 4,611

Bioavailability and bioefficacy of polyphenols in humans. I. Review of 97 bioavailability studies

Manach, C., Williamson, G., Morand, C., Scalbert, A., & Rémésy, C. (2005) · The American Journal of Clinical Nutrition · doi:10.1093/ajcn/81.1.230s · Cited by 4,219

Gut microbiota in health and disease

Sekirov, I., Russell, S. L., Antunes, L. C. M., & Finlay, B. B. (2010) · Physiological Reviews · doi:10.1152/physrev.00045.2009 · Cited by 4,182

Lateral gene transfer and the nature of bacterial innovation

Ochman, H., Lawrence, J. G., & Groisman, E. A. (2000) · Nature · doi:10.1038/35012500 · Cited by 3,816

The gut flora as a forgotten organ

O'Hara, A. M., & Shanahan, F. (2006) · The EMBO Reports · doi:10.1038/sj.embor.7400731 · Cited by 2,791

Tryptophan catabolites from microbiota engage aryl hydrocarbon receptor and balance mucosal reactivity via interleukin-22

Zelante, T., Iannitti, R. G., Cunha, C., De Luca, A., Giovannini, G., Pieraccini, G., Zecchi, R., D’Angelo, C., Massi-Benedetti, C., Fallarino, F., et al. (2013) · Immunity · doi:10.1016/j.immuni.2013.08.003 · Cited by 2,614

Changes in gut microbiota control inflammation in obese mice through a mechanism involving GLP-2-driven improvement of gut permeability

Cani, P. D., Possemiers, S., Van de Wiele, T., Guiot, Y., Everard, A., Rottier, O., Geurts, L., Naslain, D., Neyrinck, A., Lambert, D. M., et al. (2009) · Gut · doi:10.1136/gut.2008.165886 · Cited by 2,518

Commensal Host-Bacterial Relationships in the Gut

Hooper, L. V., & Gordon, J. I. (2001) · Science · doi:10.1126/science.1058709 · Cited by 2,362

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

Dethlefsen, L., Huse, S., Sogin, M. L., & Relman, D. A. (2008) · PLoS Biology · doi:10.1371/journal.pbio.0060280 · Cited by 2,361

Renal and Extrarenal Effects of Gum Arabic (Acacia Senegal) - What Can be Learned from Animal Experiments?

Nasir, O. (2013) · Kidney & Blood Pressure Research · doi:10.1159/000350152 · Cited by 2,331

Molecular Analysis of Commensal Host-Microbial Relationships in the Intestine

Hooper, L. V., Wong, M. H., Thelin, A., Hansson, L., Falk, P. G., & Gordon, J. I. (2001) · Science · doi:10.1126/science.291.5505.881 · Cited by 2,202

The inner of the two Muc2 mucin-dependent mucus layers in colon is devoid of bacteria

Johansson, M. E. V., Phillipson, M., Petersson, J., Velcich, A., Holm, L., & Hansson, G. C. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0803124105 · Cited by 2,200

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

Quail, M., Smith, M. E., Coupland, P., Otto, T. D., Harris, S. R., Connor, T. R., Bertoni, A., Swerdlow, H. P., & Gu, Y. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-341 · Cited by 2,031

Regulation of short-chain fatty acid production

Macfarlane, S., & Macfarlane, G. T. (2003) · Proceedings of the Nutrition Society · doi:10.1079/pns2002207 · Cited by 1,939

Microbial Influences in Inflammatory Bowel Diseases

Sartor, R. B. (2008) · Gastroenterology · doi:10.1053/j.gastro.2007.11.059 · Cited by 1,927

Mobile genetic elements: the agents of open source evolution

Frost, L. S., Leplae, R., Summers, A. O., & Toussaint, A. (2005) · Nature Reviews Microbiology · doi:10.1038/nrmicro1235 · Cited by 1,839

The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age

Mariat, D., Firmesse, O., Levenez, F., Guimarăes, V., Sokol, H., Doré, J., Corthier, G., & Furet, J.-P. (2009) · BMC Microbiology · doi:10.1186/1471-2180-9-123 · Cited by 1,755

Composition, variability, and temporal stability of the intestinal microbiota of the elderly

Claesson, M. J., Cusack, S., O'Sullivan, O., Greene-Diniz, R., de Weerd, H., Flannery, E., Marchesi, J. R., Falush, D., Dinan, T., Fitzgerald, G., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000097107 · Cited by 1,754

An ecological and evolutionary perspective on human–microbe mutualism and disease

Dethlefsen, L., McFall-Ngai, M., & Relman, D. A. (2007) · Nature · doi:10.1038/nature06245 · Cited by 1,660

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

Walker, A. W., Ince, J., Duncan, S. H., Webster, L. M., Holtrop, G., Ze, X., Brown, D., Stares, M. D., Scott, P., Bergerat, A., et al. (2011) · The ISME Journal · doi:10.1038/ismej.2010.118 · Cited by 1,632

Comparison of Next-Generation Sequencing Systems

Liu, L., Li, Y., Li, S., Hu, N., He, Y., Pong, R., Lin, D., Lü, L., & Law, M. (2012) · BioMed Research International · doi:10.1155/2012/251364 · Cited by 1,605

The Toll-like receptor 2 pathway establishes colonization by a commensal of the human microbiota

Round, J. L., Lee, S. M., Li, J., Tran, G., Jabri, B., Chatila, T. A., & Mazmanian, S. K. (2011) · Science · doi:10.1126/science.1206095 · Cited by 1,604

Induction of Protective IgA by Intestinal Dendritic Cells Carrying Commensal Bacteria

Macpherson, A. J., & Uhr, T. (2004) · Science · doi:10.1126/science.1091334 · Cited by 1,584

Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41

Samuel, B. S., Shaito, A., Motoike, T., Rey, F. E., Backhed, F., Manchester, J. K., Hammer, R. E., Williams, S. C., Crowley, J., Yanagisawa, M., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0808567105 · Cited by 1,564

The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host–microbial interactions

Johansson, M., Larsson, J. M. H., & Hansson, G. C. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1006451107 · Cited by 1,535

Intestinal Goblet Cells and Mucins in Health and Disease: Recent Insights and Progress

Kim, Y. S., & Ho, S. B. (2010) · Current Gastroenterology Reports · doi:10.1007/s11894-010-0131-2 · Cited by 1,531

Through Ageing, and Beyond: Gut Microbiota and Inflammatory Status in Seniors and Centenarians

Biagi, E., Nylund, L., Candela, M., Ostan, R., Bucci, L., Pini, E., Nikkïla, J., Monti, D., Satokari, R., Franceschi, C., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0010667 · Cited by 1,483

Symbiotic bacteria direct expression of an intestinal bactericidal lectin

Cash, H. L., Whitham, C. V., Behrendt, C. L., & Hooper, L. V. (2006) · Science · doi:10.1126/science.1127119 · Cited by 1,432

Symptomatic atherosclerosis is associated with an altered gut metagenome

Karlsson, F. H., Fåk, F., Nookaew, I., Tremaroli, V., Fagerberg, B., Petranovic, D., Bäckhed, F., & Nielsen, J. (2012) · Nature Communications · doi:10.1038/ncomms2266 · Cited by 1,371

Developmental microbial ecology of the neonatal gastrointestinal tract

Mackie, R. I., Sghir, A., & Gaskins, H. R. (1999) · The American Journal of Clinical Nutrition · doi:10.1093/ajcn/69.5.1035s · Cited by 1,360

Analysis of Intestinal Flora Development in Breast-Fed and Formula-Fed Infants by Using Molecular Identification and Detection Methods

Harmsen, H. J. M., Wildeboer-Veloo, A. C. M., Raangs, G. C., Wagendorp, A. A., Klijn, N., BINDELS, J. G., & Welling, G. W. (2000) · Journal of Pediatric Gastroenterology and Nutrition · doi:10.1097/00005176-200001000-00019 · Cited by 1,326

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

Hamady, M., Walker, J. J., Harris, J. K., Gold, N. J., & Knight, R. (2008) · Nature Methods · doi:10.1038/nmeth.1184 · Cited by 1,310

Gut immune maturation depends on colonization with a host-specific microbiota

Chung, H., Pamp, S. J., Hill, J. A., Surana, N. K., Edelman, S. M., Troy, E. B., Reading, N. C., Villablanca, E. J., Wang, S., Mora, J. R., et al. (2012) · Cell · doi:10.1016/j.cell.2012.04.037 · Cited by 1,241

Microbial culturomics: paradigm shift in the human gut microbiome study

Lagier, J., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., et al. (2012) · Clinical Microbiology and Infection · doi:10.1111/1469-0691.12023 · Cited by 1,200

Glycan foraging in vivo by an intestine-adapted bacterial symbiont

Sonnenburg, J. L., Xu, J., Leip, D. D., Chen, C.-H., Westover, B. P., Weatherford, J., Buhler, J. D., & Gordon, J. I. (2005) · Science · doi:10.1126/science.1109051 · Cited by 1,184

The first 1000 cultured species of the human gastrointestinal microbiota

Rajilić-Stojanović, M., & de Vos, W. M. (2014) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12075 · Cited by 1,182

Short-term antibiotic treatment has differing long-term impacts on the human throat and gut microbiome

Jakobsson, H. E., Jernberg, C., Andersson, A. F., Sjölund-Karlsson, M., Jansson, J. K., & Engstrand, L. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009836 · Cited by 1,160

Long-term ecological impacts of antibiotic administration on the human intestinal microbiota

Jernberg, C., Löfmark, S., Edlund, C., & Jansson, J. K. (2007) · The ISME Journal · doi:10.1038/ismej.2007.3 · Cited by 1,134

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

Hehemann, J.-H., Correc, G., Barbeyron, T., Helbert, W., Czjzek, M., & Michel, G. (2010) · Nature · doi:10.1038/nature08937 · Cited by 1,117

Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells

Stappenbeck, T. S., Hooper, L. V., & Gordon, J. I. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.202604299 · Cited by 1,095

Lactic Acid Permeabilizes Gram-Negative Bacteria by Disrupting the Outer Membrane

Alakomi, H.-L., Skyttä, E., Saarela, M., Mattila-Sandholm, T., Latva-Kala, K., & Helander, I. M. (2000) · Applied and Environmental Microbiology · doi:10.1128/aem.66.5.2001-2005.2000 · Cited by 1,093

Effects of probiotics on gut microbiota: mechanisms of intestinal immunomodulation and neuromodulation

Hemarajata, P., & Versalovic, J. (2013) · Therapeutic Advances in Gastroenterology · doi:10.1177/1756283x12459294 · Cited by 1,083

Alleviating Cancer Drug Toxicity by Inhibiting a Bacterial Enzyme

Wallace, B. D., Wang, H., Lane, K. T., Scott, J. E., Orans, J., Koo, J. S., Venkatesh, M., Jobin, C., Yeh, L.-A., Mani, S., et al. (2010) · Science · doi:10.1126/science.1191175 · Cited by 1,080

Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing

Andersson, A. F., Lindberg, M., Jakobsson, H. E., Bäckhed, F., Nyrén, P., & Engstrand, L. G. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002836 · Cited by 1,079

Dysbiosis of the faecal microbiota in patients with Crohn’s disease and their unaffected relatives

Joossens, M., Huys, G., Cnockaert, M., De Preter, V., Verbeke, K., Rutgeerts, P., Vandamme, P., & Vermeire, S. (2011) · Gut · doi:10.1136/gut.2010.223263 · Cited by 1,063

Islet Amyloid Polypeptide, Islet Amyloid, and Diabetes Mellitus

Westermark, P., Andersson, A., & Westermark, G. T. (2011) · Physiological Reviews · doi:10.1152/physrev.00042.2009 · Cited by 1,044

Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens

Ng, K. M., Ferreyra, J. A., Higginbottom, S. K., Lynch, J. B., Kashyap, P. C., Gopinath, S., Naidu, N., Choudhury, B., Weimer, B. C., Monack, D. M., et al. (2013) · Nature · doi:10.1038/nature12503 · Cited by 1,035

Ecology drives a global network of gene exchange connecting the human microbiome

Smillie, C. S., Smith, M. B., Friedman, J., Cordero, O. X., David, L. A., & Alm, E. J. (2011) · Nature · doi:10.1038/nature10571 · Cited by 992

Angiogenins: a new class of microbicidal proteins involved in innate immunity

Hooper, L. V., Stappenbeck, T. S., Hong, C. V., & Gordon, J. I. (2003) · Nature Immunology · doi:10.1038/ni888 · Cited by 947

Spatial organization and composition of the mucosal flora in patients with inflammatory bowel disease

Swidsinski, A., Weber, J., Loening-Baucke, V., Hale, L. P., & Lochs, H. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.7.3380-3389.2005 · Cited by 894

The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota

Lagier, J., Hugon, P., Khelaifia, S., Fournier, P., Scola, B. L., & Raoult, D. (2015) · Clinical Microbiology Reviews · doi:10.1128/cmr.00014-14 · Cited by 876

Intestinal Bacterial Colonization Induces Mutualistic Regulatory T Cell Responses

Geuking, M. B., Cahenzli, J., Lawson, M. A. E., Ng, D. C. K., Slack, E., Hapfelmeier, S., McCoy, K. D., & Macpherson, A. J. (2011) · Immunity · doi:10.1016/j.immuni.2011.03.021 · Cited by 840

The expanding family of innate lymphoid cells: regulators and effectors of immunity and tissue remodeling

Spits, H., & Santo, J. P. D. (2010) · Nature Immunology · doi:10.1038/ni.1962 · Cited by 840

Defining a Healthy Human Gut Microbiome: Current Concepts, Future Directions, and Clinical Applications

Bäckhed, F., Fraser, C. M., Ringel, Y., Sanders, M. E., Sartor, R. B., Sherman, P. M., Versalovic, J., Young, V., & Finlay, B. B. (2012) · Cell Host & Microbe · doi:10.1016/j.chom.2012.10.012 · Cited by 836

Bioavailability of Dietary Polyphenols and Gut Microbiota Metabolism: Antimicrobial Properties

Marín, L., Miguélez, E. M., Villar, C. J., & Lombó, F. (2015) · BioMed Research International · doi:10.1155/2015/905215 · Cited by 802

Reduced diversity of the intestinal microbiota during infancy is associated with increased risk of allergic disease at school age

Bisgaard, H., Li, N., Bonnelykke, K., Chawes, B. L. K., Skov, T., Paludan-Müller, G., Stokholm, J., Smith, B., & Krogfelt, K. A. (2011) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2011.04.060 · Cited by 786

Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism

Clayton, T. A., Baker, D., Lindon, J. C., Everett, J. R., & Nicholson, J. K. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0904489106 · Cited by 765

Intestinal Alkaline Phosphatase Detoxifies Lipopolysaccharide and Prevents Inflammation in Zebrafish in Response to the Gut Microbiota

Bates, J. M., Akerlund, J., Mittge, E., & Guillemin, K. J. (2007) · Cell Host & Microbe · doi:10.1016/j.chom.2007.10.010 · Cited by 752

Intestinal Bacteria Trigger T Cell-Independent Immunoglobulin A2 Class Switching by Inducing Epithelial-Cell Secretion of the Cytokine APRIL

He, B., Xu, W., Santini, P. A., Polydorides, A. D., Chiu, A., Estrella, J. S., Shan, M., Chadburn, A., Villanacci, V., Plebani, A., et al. (2007) · Immunity · doi:10.1016/j.immuni.2007.04.014 · Cited by 748

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform

Schirmer, M., Ijaz, U. Z., D'Amore, R., Hall, N., Sloan, W. T., & Quince, C. (2015) · Nucleic Acids Research · doi:10.1093/nar/gku1341 · Cited by 743

Innate Lymphoid Cells: Emerging Insights in Development, Lineage Relationships, and Function

Spits, H., & Cupedo, T. (2012) · Annual Review of Immunology · doi:10.1146/annurev-immunol-020711-075053 · Cited by 722

Toll-like receptor 2 controls mucosal inflammation by regulating epithelial barrier function

Cario, E., Gerken, G., & Podolsky, D. K. (2007) · Gastroenterology · doi:10.1053/j.gastro.2007.02.056 · Cited by 697

Human milk glycobiome and its impact on the infant gastrointestinal microbiota

Zivkovic, A. M., German, J. B., Lebrilla, C. B., & Mills, D. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000083107 · Cited by 679

Insights into the metabolism and microbial biotransformation of dietary flavan-3-ols and the bioactivity of their metabolites

Monagas, M., Urpí-Sardà, M., Sánchez‐Patán, F., Llorach, R., Garrido, I., Gómez‐Cordovés, C., Andrés‐Lacueva, C., & Bartolomé, B. (2010) · Food & Function · doi:10.1039/c0fo00132e · Cited by 615

Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease

Albenberg, L. G., & Wu, G. D. (2014) · Gastroenterology · doi:10.1053/j.gastro.2014.01.058 · Cited by 606

The gut microbiota modulates host energy and lipid metabolism in mice

Velagapudi, V. R., Hezaveh, R., Reigstad, C. S., Gopalacharyulu, P., Yetukuri, L., Islam, S., Felin, J., Perkins, R., Borén, J., Orešič, M., et al. (2010) · Journal of Lipid Research · doi:10.1194/jlr.m002774 · Cited by 589

Compositional and Functional Features of the Gastrointestinal Microbiome and Their Effects on Human Health

Hollister, E. B., Gao, C., & Versalovic, J. A. (2014) · Gastroenterology · doi:10.1053/j.gastro.2014.01.052 · Cited by 561

Inflammation switches the differentiation program of Ly6Chi monocytes from antiinflammatory macrophages to inflammatory dendritic cells in the colon

Rivollier, A., He, J., Kole, A., Valatas, V., & Kelsall, B. L. (2012) · The Journal of Experimental Medicine · doi:10.1084/jem.20101387 · Cited by 548

In Vitro Metabolism of Plant Lignans: New Precursors of Mammalian Lignans Enterolactone and Enterodiol

Heinonen, S., Nurmi, T., Liukkonen, K. H., Poutanen, K. S., Wähälä, K., Deyama, T., Nishibe, S., & Adlercreutz, H. (2001) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf010038a · Cited by 523

Development and differences of intestinal flora in the neonatal period in breast-fed and bottle-fed infants

Yoshioka, H., Iseki, K.-I., & Fujita, K. (1983) · PEDIATRICS · doi:10.1542/peds.72.3.317 · Cited by 516

Colonic metabolism of dietary polyphenols: influence of structure on microbial fermentation products

Rechner, A. R., Smith, M. A., Kuhnle, G., Gibson, G. R., Debnam, E. S., Srai, S. K., Moore, K. P., & Rice-Evans, C. A. (2004) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2003.09.022 · Cited by 512

Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases

Peterson, D. A., Frank, D. N., Pace, N. R., & Gordon, J. I. (2008) · Cell Host & Microbe · doi:10.1016/j.chom.2008.05.001 · Cited by 503

Bacterial biota in the human distal esophagus

Pei, Z., Bini, E. J., Yang, L., Zhou, M., Francois, F., & Blaser, M. J. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0306398101 · Cited by 501

Histamine Derived from Probiotic Lactobacillus reuteri Suppresses TNF via Modulation of PKA and ERK Signaling

Thomas, C. M., Hong, T., van Pijkeren, J. P., Hemarajata, P., Trinh, D. V., Hu, W., Britton, R. A., Kalkum, M., & Versalovic, J. (2012) · PLoS ONE · doi:10.1371/journal.pone.0031951 · Cited by 491

Assessing the Human Gut Microbiota in Metabolic Diseases

Karlsson, F. H., Tremaroli, V., Nielsen, J., & Bäckhed, F. (2013) · Diabetes · doi:10.2337/db13-0844 · Cited by 468

Postnatal acquisition of endotoxin tolerance in intestinal epithelial cells

Lotz, M., Gütle, D., Walther, S., Ménard, S., Bogdan, C., & Hornef, M. W. (2006) · The Journal of Experimental Medicine · doi:10.1084/jem.20050625 · Cited by 464

Flavanol monomer-induced changes to the human faecal microflora

Tzounis, X., Vulevic, J., Kuhnle, G., George, T. W., Leonczak, J., Gibson, G. R., Kwik-Uribe, C. L., & Spencer, J. P. E. (2007) · British Journal Of Nutrition · doi:10.1017/s0007114507853384 · Cited by 455

The role of the immune system in governing host-microbe interactions in the intestine

Brown, E., Sadarangani, M., & Finlay, B. B. (2013) · Nature Immunology · doi:10.1038/ni.2611 · Cited by 431

Prebiotics from marine macroalgae for human and animal health applications

O’Sullivan, L., Murphy, B., McLoughlin, P., Duggan, P., Lawlor, P. G., Hughes, H., & Gardiner, G. E. (2010) · Marine Drugs · doi:10.3390/md8072038 · Cited by 421

NLRC4-driven production of IL-1β discriminates between pathogenic and commensal bacteria and promotes host intestinal defense

Franchi, L., Kamada, N., Nakamura, Y., Burberry, A., Kuffa, P., Suzuki, S., Shaw, M. H., Kim, Y., & Núñez, G. (2012) · Nature Immunology · doi:10.1038/ni.2263 · Cited by 414

Paneth cells, defensins, and the commensal microbiota: A hypothesis on intimate interplay at the intestinal mucosa

Salzman, N. H., Underwood, M. A., & Bevins, C. L. (2007) · Seminars in Immunology · doi:10.1016/j.smim.2007.04.002 · Cited by 414

Meconium microbiota types dominated by lactic acid or enteric bacteria are differentially associated with maternal eczema and respiratory problems in infants

Gosalbes, M. J., Llop, S., Vallès, Y., Moyá, A., Ballester, F., & Francino, M. P. (2012) · Clinical & Experimental Allergy · doi:10.1111/cea.12063 · Cited by 399

A survey of modulation of gut microbiota by dietary polyphenols

Dueñas, M., Muñoz-González, I., Cueva, C., Jiménez-Girón, A., Sánchez-Patán, F., Santos-Buelga, C., Moreno-Arribas, M. V., & Bartolomé, B. (2015) · BioMed Research International · doi:10.1155/2015/850902 · Cited by 396

Colon-specific delivery of a probiotic-derived soluble protein ameliorates intestinal inflammation in mice through an EGFR-dependent mechanism

Yan, F., Cao, H., Cover, T. L., Washington, M. K., Shi, Y., Liu, L., Chaturvedi, R., Peek, R. M., Wilson, K. T., & Polk, D. B. (2011) · Journal of Clinical Investigation · doi:10.1172/jci44031 · Cited by 386

Expression of the cathelicidin LL-37 is modulated by short chain fatty acids in colonocytes: relevance of signalling pathways

Schauber, J. (2003) · Gut · doi:10.1136/gut.52.5.735 · Cited by 383

Complex Carbohydrate Utilization by the Healthy Human Microbiome

Cantarel, B. L., Lombard, V., & Henrissat, B. (2012) · PLoS ONE · doi:10.1371/journal.pone.0028742 · Cited by 378

A mass spectrometry–guided genome mining approach for natural product peptidogenomics

Kersten, R. D., Yang, Y., Xu, Y., Cimermančič, P., Nam, S.-J., Fenical, W., Fischbach, M. A., Moore, B. S., & Dorrestein, P. C. (2011) · Nature Chemical Biology · doi:10.1038/nchembio.684 · Cited by 365

Short-Term Effect of Antibiotics on Human Gut Microbiota

Panda, S., khader, I. E., Casellas, F., Vivancos, J., Cors, M. G., Santiago, A., Cuenca, S., Guarner, F., & Manichanh, C. (2014) · PLoS ONE · doi:10.1371/journal.pone.0095476 · Cited by 364

Irritable bowel syndrome: A microbiome-gut-brain axis disorder?

Kennedy, P. J. (2014) · World Journal of Gastroenterology · doi:10.3748/wjg.v20.i39.14105 · Cited by 347

PATRIC: the Comprehensive Bacterial Bioinformatics Resource with a Focus on Human Pathogenic Species

Gillespie, J. J., Wattam, A. R., Cammer, S. A., Gabbard, J. L., Shukla, M. P., Dalay, O., Driscoll, T., Hix, D., Mane, S. P., Mao, C., et al. (2011) · Infection and Immunity · doi:10.1128/iai.00207-11 · Cited by 347

Distal gut microbiota of adolescent children is different from that of adults: Gut microbiota of adolescents differs from that of adults

Agans, R., Rigsbee, L., Kenche, H., Michail, S., Khamis, H. J., & Paliy, O. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01120.x · Cited by 343

RELMβ/FIZZ2 is a goblet cell-specific immune-effector molecule in the gastrointestinal tract

Artis, D., Wang, M. L., Keilbaugh, S. A., He, W., Brenes, M., Swain, G. P., Knight, P. A., Donaldson, D. D., Lazar, M. A., Miller, H. R. P., et al. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0404034101 · Cited by 326

Hypothesis: The Changing Relationships ofHelicobacter pyloriand Humans: Implications for Health and Disease

Blaser, M. J. (1999) · The Journal of Infectious Diseases · doi:10.1086/314785 · Cited by 322

Seasonal Variation in Human Gut Microbiome Composition

Davenport, E. R., Mizrahi-Man, O., Michelini, K., Barreiro, L. B., Ober, C., & Gilad, Y. (2014) · PLoS ONE · doi:10.1371/journal.pone.0090731 · Cited by 314

Spatial organization of bacterial flora in normal and inflamed intestine: A fluorescence in situ hybridization study in mice

Swidsinski, A. (2005) · World Journal of Gastroenterology · doi:10.3748/wjg.v11.i8.1131 · Cited by 314

Isolation and characterization of human colonic bacteria able to hydrolyse chlorogenic acid

Couteau, D., McCartney, A. L., Gibson, G. R., Williamson, G., & Faulds, C. B. (2001) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2001.01316.x · Cited by 305

Development of the preterm infant gut microbiome: a research priority

Groer, M. W., Luciano, A. A., Dishaw, L. J., Ashmeade, T. L., Miller, E. M., & Gilbert, J. A. (2014) · Microbiome · doi:10.1186/2049-2618-2-38 · Cited by 302

Metabolism of Linoleic Acid by Human Gut Bacteria: Different Routes for Biosynthesis of Conjugated Linoleic Acid

Devillard, E., McIntosh, F. M., Duncan, S. H., & Wallace, R. J. (2007) · Journal of Bacteriology · doi:10.1128/jb.01359-06 · Cited by 285

Innate Lymphoid Cell Interactions with Microbiota: Implications for Intestinal Health and Disease

Sonnenberg, G. F., & Artis, D. (2012) · Immunity · doi:10.1016/j.immuni.2012.10.003 · Cited by 272

Do symbiotic bacteria subvert host immunity?

Hooper, L. V. (2009) · Nature Reviews Microbiology · doi:10.1038/nrmicro2114 · Cited by 269

Identification of human intestinal trefoil factor. Goblet cell-specific expression of a peptide targeted for apical secretion.

Podolsky, D. K., Lynch–Devaney, K., Stow, J. L., Oates, P. S., Murgue, B., deBeaumont, M., Sands, B. E., & Mahida, Y. R. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53305-6 · Cited by 267

The role of the intestinal microflora for the development of the immune system in early childhood

Ouwehand, A. C., Isolauri, E., & Salminen, S. (2002) · European Journal of Nutrition · doi:10.1007/s00394-002-1105-4 · Cited by 267

Digoxin-Inactivating Bacteria: Identification in Human Gut Flora

Dobkin, J. F., Saha, J. R., Butler, V. P., Neu, H. C., & Lindenbaum, J. (1983) · Science · doi:10.1126/science.6836275 · Cited by 259

In vitro fermentation and prebiotic potential of novel low molecular weight polysaccharides derived from agar and alginate seaweeds

Ramnani, P., Chitarrari, R., Tuohy, K., Grant, J., Hotchkiss, S., Philp, K., Campbell, R., Gill, C., & Rowland, I. (2012) · Anaerobe · doi:10.1016/j.anaerobe.2011.08.003 · Cited by 252

The Sensing of Environmental Stimuli by Follicular Dendritic Cells Promotes Immunoglobulin A Generation in the Gut

Suzuki, K., Maruya, M., Kawamoto, S., Sitnik, K., Kitamura, H., Agace, W. W., & Fagarasan, S. (2010) · Immunity · doi:10.1016/j.immuni.2010.07.003 · Cited by 250

C-ring cleavage of flavonoids by human intestinal bacteria

Winter, J., Moore, L. H., Dowell, V. R., & Bokkenheuser, V. D. (1989) · Applied and Environmental Microbiology · doi:10.1128/aem.55.5.1203-1208.1989 · Cited by 248

Microbial metabolism of caffeic acid and its esters chlorogenic and caftaric acids by human faecal microbiota in vitro

Gonthier, M., Rémésy, C., Scalbert, A., Cheynier, V., Souquet, J., Poutanen, K., & Aura, A. (2006) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2006.07.084 · Cited by 247

Absence of Oxalobacter formigenes in cystic fibrosis patients: a risk factor for hyperoxaluria

Sidhu, H., Hoppe, B., Hesse, A., Tenbrock, K., Brömme, S., Rietschel, E., & Peck, A. B. (1998) · The Lancet · doi:10.1016/s0140-6736(98)03038-4 · Cited by 233

Intestinal Microbiota in Healthy U.S. Young Children and Adults—A High Throughput Microarray Analysis

Ringel-Kulka, T., Cheng, J., Ringel, Y., Salojärvi, J., Carroll, I., Palva, A., de Vos, W. M., & Satokari, R. (2013) · PLoS ONE · doi:10.1371/journal.pone.0064315 · Cited by 230

The Role of Microbiota and Probiotics in Stress-Induced Gastrointestinal Damage

Lutgendorff, F., Akkermans, L., & Soderholm, J. (2008) · Current Molecular Medicine · doi:10.2174/156652408784533779 · Cited by 230

The Central Role of the Gut Microbiota in Chronic Inflammatory Diseases

Ferreira, C. M., Vieira, A. T., Vinolo, M. A. R., Oliveira, F. A., Curi, R., & Martins, F. S. (2014) · Journal of Immunology Research · doi:10.1155/2014/689492 · Cited by 230

Enhanced Susceptibility to Salmonella Infection in Streptomycin-Treated Mice*

Bohnhoff, M., & Miller, C. P. (1962) · The Journal of Infectious Diseases · doi:10.1093/infdis/111.2.117 · Cited by 225

Anaerobic degradation of flavonoids by Eubacterium ramulus

Schneider, H., & Blaut, M. (2000) · Archives of Microbiology · doi:10.1007/s002030050010 · Cited by 217

Glutamate decarboxylase‐dependent acid resistance in orally acquired bacteria: function, distribution and biomedical implications of the gadBC operon

Biase, D. D., & Pennacchietti, E. (2012) · Molecular Microbiology · doi:10.1111/mmi.12020 · Cited by 188

Bacterial Exposure Induces and Activates Matrilysin in Mucosal Epithelial Cells

López-Boado, Y. S., Wilson, C. L., Hooper, L. V., Gordon, J. I., Hultgren, S. J., & Parks, W. C. (2000) · The Journal of Cell Biology · doi:10.1083/jcb.148.6.1305 · Cited by 179

Effect of normal microbial flora on intestinal surface area

Gordon, H. A., & Bruckner-Kardoss, E. (1961) · American Journal of Physiology-Legacy Content · doi:10.1152/ajplegacy.1961.201.1.175 · Cited by 172

Toll-Like Receptor–Gut Microbiota Interactions: Perturb at Your Own Risk!

Carvalho, F. A., Aitken, J. D., Vijay–Kumar, M., & Gewirtz, A. T. (2011) · Annual Review of Physiology · doi:10.1146/annurev-physiol-020911-153330 · Cited by 171

Intestinal microflora stimulates myoelectric activity of rat small intestine by promoting cyclic initiation and aboral propagation of migrating myoelectric complex

Husebye, E., Hellström, P. M., & Midtvedt, T. (1994) · Digestive Diseases and Sciences · doi:10.1007/bf02087542 · Cited by 169

Gut microbiota, the immune system, and diet influence the neonatal gut–brain axis

Sherman, M. P., Zaghouani, H., & Niklas, V. (2014) · Pediatric Research · doi:10.1038/pr.2014.161 · Cited by 168

Comparative study of anthocyanin composition, antimicrobial and antioxidant activity in bilberry (Vaccinium myrtillus L.) and blueberry (Vaccinium corymbosum L.) fruits.

Burdulis, D., Šarkinas, A., Jasutienė, I., Stackevicené, E., Nikolajevas, L., & Janulis, V. (2009) · PubMed · Cited by 155

The Bioavailability of Apigenin-7-Glucoside Is Influenced by Human Intestinal Microbiota in Rats

Hanske, L., Loh, G., Sczesny, S., Blaut, M., & Braune, A. (2009) · Journal of Nutrition · doi:10.3945/jn.108.102814 · Cited by 140

Influence of 10 wk of soy consumption on plasma concentrations and excretion of isoflavonoids and on gut microflora metabolism in healthy adults

Wiseman, H., Casey, K., Bowey, E. A., Duffy, R., Davies, M., Rowland, I. R., Lloyd, A. S., Murray, A., Thompson, R., & Clarke, D. B. (2004) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/80.3.692 · Cited by 138

Differential Cell Kinetics in the Ileum and Colon of Germfree Rats

Alam, M., Midtvedt, T., & Uribe, A. (1994) · Scandinavian Journal of Gastroenterology · doi:10.3109/00365529409096836 · Cited by 127

CX3CR1+ macrophages support IL-22 production by innate lymphoid cells during infection with Citrobacter rodentium

Manta, C., Heupel, E., Radulovic, K., Rossini, V., Garbi, N., Riedel, C. U., & Niess, J. H. (2012) · Mucosal Immunology · doi:10.1038/mi.2012.61 · Cited by 123

Sodium butyrate up-regulates cathelicidin gene expression via activator protein-1 and histone acetylation at the promoter region in a human lung epithelial cell line, EBC-1

Kida, Y., SHIMIZU, T., & Kuwano, K. (2006) · Molecular Immunology · doi:10.1016/j.molimm.2005.11.014 · Cited by 118

Production of equol from daidzein by gram-positive rod-shaped bacterium isolated from rat intestine

Minamida, K., Tanaka, M., Abe, A., Sone, T., Tomita, F., Hara, H., & Asano, K. (2006) · Journal of Bioscience and Bioengineering · doi:10.1263/jbb.102.247 · Cited by 114

Conversion of cholic acid and chenodeoxycholic acid into their 7-oxo derivatives byBacteroides intestinalisAM-1 isolated from human feces

Fukiya, S., 荒田美紀, Kawashima, H., Yoshida, D., Kaneko, M. A. N., Minamida, K., Watanabe, J., Ogura, Y., Uchida, K., Itoh, K., et al. (2009) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2009.01531.x · Cited by 113

Comparative metabolism of genistin by human and rat gut microflora: detection and identification of the end-products of metabolism

Coldham, N. G., Darby, C., Hows, M. E. P., King, L. J., Zhang, A.-Q., & Sauer, M. J. (2002) · Xenobiotica · doi:10.1080/00498250110085809 · Cited by 112

Increased Enterocyte Production in Gnotobiotic Rats Mono-Associated with Lactobacillus rhamnosus GG

Banasaz, M., Norin, E. L., Holma, R., & Midtvedt, T. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.6.3031-3034.2002 · Cited by 112

Colonization of the large bowel by Clostridium difficile in healthy infants: quantitative study

Stark, P. L., Lee, A., & Parsonage, B. D. (1982) · Infection and Immunity · doi:10.1128/iai.35.3.895-899.1982 · Cited by 104

Effect of Proanthocyanidin-Rich Extract from Grape Seeds on Human Fecal Flora and Fecal Odor

Yamakoshi, J., Tokutake, S., Kikuchi, M., Konishi, H., & MITSUOKA, T. (2001) · Microbial Ecology in Health and Disease · doi:10.3402/mehd.v13i1.7996 · Cited by 101

Enhanced Anti‐Inflammatory Activities by the Combination of Luteolin and Tangeretin

Funaro, A., Wu, X., Song, M., Zheng, J., Guo, S., Rakariyatham, K., Rodríguez‐Estrada, M. T., & Xiao, H. (2016) · Journal of Food Science · doi:10.1111/1750-3841.13300 · Cited by 98

PU.1 and bacterial metabolites regulate the human gene CAMP encoding antimicrobial peptide LL-37 in colon epithelial cells

Termén, S., Tollin, M., Rodrı́guez, E., Sveinsdóttir, S. H., Jóhannesson, B., Cederlund, A., Sjövall, J., Agerberth, B., & Gudmundsson, G. H. (2008) · Molecular Immunology · doi:10.1016/j.molimm.2008.06.020 · Cited by 96

Degradation of quercetin-3-glucoside in gnotobiotic rats associated with human intestinal bacteria

Schneider, H., Simmering, R., Hartmann, L., Pforte, H., & Blaut, M. (2000) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2000.01209.x · Cited by 87

Effect of Proanthocyanidin-Rich Extract from Grape Seeds on Human Fecal Flora and Fecal Odor

Yamakoshi, J., Tokutake, S., Kikuchi, M., Kubota, Y., Konishi, H., & MITSUOKA, T. (2001) · Microbial Ecology in Health and Disease · doi:10.1080/089106001750071672 · Cited by 87

Identification of Urinary Metabolites of the Red Clover Isoflavones Formononetin and Biochanin A in Human Subjects

Heinonen, S., Wähälä, K., & Adlercreutz, H. (2004) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf0492767 · Cited by 82

The Normal Bacterial Flora of the Human Intestine and Its Regulation

Ramakrishna, B. (2007) · Journal of Clinical Gastroenterology · doi:10.1097/mcg.0b013e31802fba68 · Cited by 67

Conjugated linoleic acid (CLA): effect modulation of body composition and lipid profile.

Feitoza, A. B., Pereira, A. F., da Costa, N. F., & Ribeiro, B. G. (2009) · PubMed · Cited by 67

Differences between human subjects in the composition of the faecal bacterial community and faecal metabolism of linoleic acid

Devillard, E., McIntosh, F. M., Paillard, D., Thomas, N. A., Shingfield, K. J., & Wallace, R. J. (2009) · Microbiology · doi:10.1099/mic.0.023416-0 · Cited by 65

Selecting age-related functional characteristics in the human gut microbiome

Lan, Y., Kriete, A., & ROSEN, G. L. (2013) · Microbiome · doi:10.1186/2049-2618-1-2 · Cited by 61

Transitions in Oral and Intestinal Microflora Composition and Innate Immune Receptor-Dependent Stimulation during Mouse Development

Hasegawa, M., Osaka, T., Tawaratsumida, K., Yamazaki, T., Tada, H., Chen, G., Tsuneda, S., Núñez, G., & Inohara, N. (2009) · Infection and Immunity · doi:10.1128/iai.01043-09 · Cited by 58

The Normal Cultivable Microflora in Upper Jejunal Fluid in Healthy Adults

Justesen, T., Nielsen, O. H., Jacobsen, I. E., Lave, J., & Rasmussen, S. N. (1984) · Scandinavian Journal of Gastroenterology · doi:10.1080/00365521.1984.12005721 · Cited by 56

Origin and fate of IgE-bearing lymphocytes. I. Peyer's patches as differentiation site of cells. Simultaneously bearing IgA and IgE.

Durkin, H. G., Bazin, H., & Waksman, B. H. (1981) · The Journal of Experimental Medicine · doi:10.1084/jem.154.3.640 · Cited by 55

Absence of Oxalobacter Formigenes in Cystic Fibrosis Patients: A Risk Factor for Hyperoxaluria

Sidhu, H., Höppe, B., Hesse, A., Tenbrock, K., Bromme, S., Rietschel, E., & Peck, A. B. (1999) · The Journal of Urology · doi:10.1016/s0022-5347(05)69046-5 · Cited by 53

Characterization of Tannin-tolerant Bacterial Isolates from East African Ruminants

Odenyo, A., Bishop, R. P., Asefa, G., Jamnadass, R., Odongo, D., & Osuji, P. O. (2001) · Anaerobe · doi:10.1006/anae.2000.0367 · Cited by 49

Diversity of faecal oxalate-degrading bacteria in black and white South African study groups: insights into understanding the rarity of urolithiasis in the black group

Magwira, C. A., Kullin, B., Lewandowski, S., Rodgers, A. L., Reid, S. J., & Abratt, V. R. (2012) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2012.05346.x · Cited by 45

Variations in 16S rRNA-based microbiome profiling between pyrosequencing runs and between pyrosequencing facilities

Kim, M., & Yu, Z. (2014) · The Journal of Microbiology · doi:10.1007/s12275-014-3443-3 · Cited by 44

Enhanced anti-inflammatory activities by the combination of luteolin and tangeretin

FUNARO, A., RODRIGUEZ ESTRADA, M. T., Wu, X., et al. (2016) · Archivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna) · doi:10.1111/1750-3841 · Cited by 42

Chemical Profile and Antioxidative and Antimicrobial Activity of Juices and Extracts of 4 Black Currants Varieties ( Ribes nigrum L.)

Miladinović, B., Kostić, M., Šavikin, K., Đorđević, B., Mihajilov‐Krstev, T., Živanović, S. C., & Kitić, D. (2014) · Journal of Food Science · doi:10.1111/1750-3841.12364 · Cited by 34

Introduction to the human gut microbiota

Thursby, E., & Juge, N. (2017) · Biochemical Journal · doi:10.1042/bcj20160510 · Cited by 3,600

Environment dominates over host genetics in shaping human gut microbiota

Rothschild, D., Weissbrod, O., Barkan, E., Kurilshikov, A., Korem, T., Zeevi, D., Costea, P. I., Godneva, A., Kalka, I. N., Bar, N., et al. (2018) · Nature · doi:10.1038/nature25973 · Cited by 2,859

The Firmicutes/Bacteroidetes Ratio: A Relevant Marker of Gut Dysbiosis in Obese Patients?

Magne, F., Gotteland, M., Gauthier, L., Zazueta, A., Pesoa, S., Navarrete, P., & Balamurugan, R. (2020) · Nutrients · doi:10.3390/nu12051474 · Cited by 2,335

Obesity: Epidemiology, Pathophysiology, and Therapeutics

Lin, X., & Li, H. (2021) · Frontiers in Endocrinology · doi:10.3389/fendo.2021.706978 · Cited by 1,530

Prenatal developmental origins of behavior and mental health: The influence of maternal stress in pregnancy

Van den Bergh, B. R. H., van den Heuvel, M. I., Lahti, M., Braeken, M., de Rooij, S. R., Entringer, S., Hoyer, D., Roseboom, T., Räikkönen, K., King, S., et al. (2020) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2017.07.003 · Cited by 1,181

Analysis of the relevance of microflora stabilization and measures to improve IT

Mamatmusaeva, F., Gulmurotova, D., Isroilova, G., & Ravshanova, N. (2025) · Eurasian Journal of Medical and Natural Sciences · doi:10.70413/ejmns-v05-i11-s46762

Microbiota in a long survival discourse with the human host

Ayariga, J. A., Ibrahim, I., Gildea, L., Abugri, J., & Villafañe, R. (2022) · Archives of Microbiology · doi:10.1007/s00203-022-03342-6 · Cited by 12

Gut microbiota in health and disease

Ganguly, S., & Chandrasekhara, P. (2019) · APIK Journal of Internal Medicine · doi:10.4103/2666-1802.260257 · Cited by 7

GUT MICROBIOTA AND ITS IMPORTANCE FOR HUMAN HEALTH

Дамировна, С. Д., Abdulkhakov, S. R., & AMIROV, N. B. (2021) · The Bulletin of Contemporary Clinical Medicine · doi:10.20969/vskm.2021.14(5).81-94 · Cited by 6

What is the Healthy Gut Microbiota Composition? A Changing Ecosystem across Age, Environment, Diet, and Diseases

Rinninella, E., Raoul, P., Cintoni, M., Franceschi, F., Miggiano, G. A. D., Gasbarrini, A., & Mele, M. C. (2019) · Microorganisms · doi:10.3390/microorganisms7010014 · Cited by 3,462