The DOI matches its Crossref record; 25 of the 25 references it cites were found in a registry or an index.
Ubiquitination and the Regulation of Membrane Proteins
Abstract
Newly synthesized transmembrane proteins undergo a series of steps to ensure that only the required amount of correctly folded protein is localized to the membrane. The regulation of protein quality and its abundance at the membrane are often controlled by ubiquitination, a multistep enzymatic process that results in the attachment of ubiquitin, or chains of ubiquitin to the target protein. Protein ubiquitination acts as a signal for sorting, trafficking, and the removal of membrane proteins via endocytosis, a process through which multiple ubiquitin ligases are known to specifically regulate the functions of a number of ion channels, transporters, and signaling receptors. Endocytic removal of these proteins through ubiquitin-dependent endocytosis provides a way to rapidly downregulate the physiological outcomes, and defects in such controls are directly linked to human pathologies. Recent evidence suggests that ubiquitination is also involved in the shedding of membranes and associated proteins as extracellular vesicles, thereby not only controlling the cell surface levels of some membrane proteins, but also their potential transport to neighboring cells. In this review, we summarize the mechanisms and functions of ubiquitination of membrane proteins and provide specific examples of ubiquitin-dependent regulation of membrane proteins.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Extracellular vesicles: Exosomes, microvesicles, and friends
Raposo, G., & Stoorvogel, W. (2013) · Journal of Cell Biology · doi:10.1083/jcb.201211138 · Cited by 8,099
Mdm2 promotes the rapid degradation of p53
Haupt, Y., Maya, R., Kazaz, A., & Oren, M. (1997) · Nature · doi:10.1038/387296a0 · Cited by 4,506
Hereditary Early-Onset Parkinson's Disease Caused by Mutations in PINK1
Valente, E. M., Abou-Sleiman, P. M., Caputo, V., Muqit, M. M. K., Harvey, K., Gispert, S., Ali, Z., Del Turco, D., Bentivoglio, A. R., Healy, D. G., et al. (2004) · Science · doi:10.1126/science.1096284 · Cited by 3,481
Johnstone, R. M., Adam, M., Hammond, J. R., Orr, L., & Turbide, C. (1987) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48095-7 · Cited by 2,931
RING Domain E3 Ubiquitin Ligases
Deshaies, R. J., & Joazeiro, C. A. P. (2009) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.78.101807.093809 · Cited by 2,679
The Roles of PINK1, Parkin, and Mitochondrial Fidelity in Parkinson’s Disease
Pickrell, A. M., & Youle, R. J. (2015) · Neuron · doi:10.1016/j.neuron.2014.12.007 · Cited by 2,310
Function and regulation of cullin–RING ubiquitin ligases
Petroski, M. D., & Deshaies, R. J. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1547 · Cited by 2,148
Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin
Tanaka, A., Cleland, M. M., Xu, S., Narendra, D. P., Suen, D.-F., Karbowski, M., & Youle, R. J. (2010) · Journal of Cell Biology · doi:10.1083/jcb.201007013 · Cited by 1,369 · cited 1×
“This removal of mitochondrial proteins then leads to the degradation of the mitochondria by mitophagy (41, 340).”
BackgroundWelcker, M., & Clurman, B. E. (2008) · Nature Reviews Cancer · doi:10.1038/nrc2290 · Cited by 1,084
Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser65
Kazlauskaite, A., Kondapalli, C., Gourlay, R., Campbell, D. G., Ritorto, M. S., Hofmann, K., Alessi, D. R., Knebel, A., Trost, M., & Muqit, M. M. K. (2014) · Biochemical Journal · doi:10.1042/bj20140334 · Cited by 806
Yoshii, S. R., Kishi, C., Ishihara, N., & Mizushima, N. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.209338 · Cited by 612
Drugging the undruggables: exploring the ubiquitin system for drug development
Huang, X., & Dixit, V. M. (2016) · Cell Research · doi:10.1038/cr.2016.31 · Cited by 427 · cited 2×
“As briefly discussed above and reviewed recently elsewhere (143), various novel strategies are currently underway for drug development to target the ubiquitin system.”
BackgroundChromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers
Maser, R. S., Choudhury, B., Campbell, P. J., Feng, B., Wong, K.-K., Protopopov, A., O’Neil, J., Gutierrez, A., Ivanova, E., Perna, I., et al. (2007) · Nature · doi:10.1038/nature05886 · Cited by 377
Ubiquitination in postsynaptic function and plasticity
Mabb, A. M., & Ehlers, M. D. (2010) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev-cellbio-100109-104129 · Cited by 255
Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory
Cournia, Z., Allen, T. W., Andricioaei, I., Antonny, B., Baum, D., Brannigan, G., Buchete, N.-V., Deckman, J. T., Delemotte, L., del Val, C., et al. (2015) · The Journal of Membrane Biology · doi:10.1007/s00232-015-9802-0 · Cited by 235
Niendorf, S., Oksche, A., Kisser, A., Löhler, J., Prinz, M., Schorle, H., Feller, S., Lewitzky, M., Horak, I., & Knobeloch, K.-P. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01566-06 · Cited by 207
The ubiquitin ligase gp78 promotes sarcoma metastasis by targeting KAI1 for degradation
Tsai, Y. C., Mendoza, A., Mariano, J. M., Zhou, M., Kostova, Z., Chen, B., Veenstra, T., Hewitt, S. M., Helman, L. J., Khanna, C., et al. (2007) · Nature Medicine · doi:10.1038/nm1686 · Cited by 186
Poly-ubiquitination in TNFR1-mediated necroptosis
Dondelinger, Y., Darding, M., Bertrand, M. J. M., & Walczak, H. (2016) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-016-2191-4 · Cited by 173
Foot, N. J., Dalton, H. E., Shearwin-Whyatt, L. M., Dorstyn, L., Tan, S.-S., Yang, B., & Kumar, S. (2008) · Blood · doi:10.1182/blood-2008-04-150953 · Cited by 143
Self-citationUBE3A Regulates Synaptic Plasticity and Learning and Memory by Controlling SK2 Channel Endocytosis
Sun, J., Zhu, G., Liu, Y., Standley, S., Ji, A., Tunuguntla, R., Wang, Y., Claus, C., Luo, Y., Baudry, M., et al. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.06.023 · Cited by 131
Cao, Z., Wu, X., Yen, L., Sweeney, C., & Carraway, K. L. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01245-06 · Cited by 119
Ubiquitination of CD86 is a key mechanism in regulating antigen presentation by dendritic cells
Baravalle, G., Park, H., McSweeney, M., Ohmura-Hoshino, M., Matsuki, Y., Ishido, S., & Shin, J.-S. (2011) · The Journal of Immunology · doi:10.4049/jimmunol.1101643 · Cited by 115
Scudder, S. L., Goo, M. S., Cartier, A. E., Molteni, A., Schwarz, L. A., Wright, R., & Patrick, G. N. (2014) · The Journal of Neuroscience · doi:10.1523/jneurosci.2452-14.2014 · Cited by 81
Flach, K., Ramminger, E., Hilbrich, I., Arsalan-Werner, A., Albrecht, F., Herrmann, L., Goedert, M., Arendt, T., & Holzer, M. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2014.05.029 · Cited by 58
The Angelman Syndrome Protein Ube3A Regulates Synapse Development by Ubiquitinating Arc
Greer, P. L., Hanayama, R., Bloodgood, B. L., Mardinly, A. R., Lipton, D. M., Flavell, S. W., Kim, T.-K., Griffith, E. C., Waldon, Z., Maehr, R., et al. (2010) · Cell · doi:10.1016/j.cell.2010.01.026 · Cited by 30
Research works printed but not linked: 366
- 10.3324/haematol.13187 · DOI
- 10.1172/JCI5713 · DOI · Paper page
- 10.1152/physiol.00033.2005 · DOI
- 10.1074/jbc.M513803200 · DOI
- 10.1038/nn.3120 · DOI
- 10.1016/S0014-5793(00)01621-5 · DOI
- 10.3109/09687688.2015.1023378 · DOI
- 10.1074/jbc.M115.675579 · DOI
- 10.3748/wjg.14.6863 · DOI
- 10.1186/1471-2148-8-222 · DOI · Paper page
- 10.1038/labinvest.2010.152 · DOI · Paper page
- 10.1016/j.neuron.2006.03.044 · DOI · Paper page
- 10.1681/ASN.2011020132 · DOI · Paper page
- 10.1074/jbc.M113.515056 · DOI
- 10.1016/j.biocel.2009.10.005 · DOI
- 10.1128/JVI.78.3.1109-1120.2004 · DOI · Paper page
- 10.1038/35050524 · DOI · Paper page
- 10.1016/j.bbrc.2015.08.099 · doi:10.1016/j.bbrc.2015.08.099
- 10.1091/mbc.E09-11-0926 · DOI
- 10.1074/jbc.M110.129411 · DOI
- 10.1091/mbc.E08-03-0308 · DOI
- 10.1091/mbc.E03-04-0202 · DOI
- 10.1016/j.gene.2014.12.020 · DOI · Paper page
- 10.1038/ncomms1284 · DOI
- 10.1091/mbc.11.4.1241 · DOI · Paper page
- 10.1038/nrm1279 · DOI · Paper page
- 10.1074/jbc.M508632200 · DOI · Paper page
- 10.1038/nature10814 · DOI · Paper page
- 10.1128/JVI.00307-10 · DOI · Paper page
- 10.1016/S0896-6273(02)00749-3 · DOI · Paper page
- 10.1182/blood-2006-12-061176 · DOI
- 10.1126/scisignal.1160940 · DOI · Paper page
- Caohuy H, 2014, J Biol Chem, 289, 35953, 10.1074/jbc.M114.598649 · DOI
- 10.1038/nature08130 · DOI
- 10.1242/dev.015529 · DOI
- 10.1523/JNEUROSCI.1817-09.2009 · DOI
- 10.1016/j.cell.2006.05.043 · DOI · Paper page
- 10.1093/hmg/11.23.2895 · DOI · Paper page
- 10.1093/hmg/ddr048 · DOI · Paper page
- 10.1371/journal.pone.0002735 · DOI
- 10.1158/1535-7163.MCT-04-0338 · DOI · Paper page
- 10.1158/1078-0432.CCR-11-0476 · DOI · Paper page
- 10.1128/MCB.00407-09 · DOI
- 10.1034/j.1600-0854.2002.030204.x · DOI
- 10.1016/j.ydbio.2003.11.010 · DOI
- 10.1042/CS20150511 · DOI
- 10.1042/BST0380144 · DOI
- 10.1002/dvdy.20683 · DOI
- 10.1038/nsmb.2793 · DOI · Paper page
- 10.4161/cib.23094 · DOI
- 10.1016/j.tcb.2015.03.002 · DOI · Paper page
- 10.1016/j.tcb.2006.09.002 · DOI · Paper page
- 10.1146/annurev-cellbio-101512-122326 · DOI · Paper page
- 10.1038/cdd.2010.130 · DOI
- 10.1242/jcs.131250 · DOI
- 10.1016/S1534-5807(01)00091-0 · DOI · Paper page
- 10.1038/emboj.2011.224 · DOI
- 10.1038/35086595 · DOI · Paper page
- 10.1128/MCB.23.15.5331-5345.2003 · DOI
- 10.1074/jbc.M109.049411 · DOI
- 10.1073/pnas.95.12.7169 · DOI
- 10.1091/mbc.E15-05-0284 · DOI
- 10.1124/mol.112.079418 · DOI
- 10.1074/jbc.M304474200 · DOI · Paper page
- 10.1016/j.bbamcr.2004.09.024 · DOI · Paper page
- 10.1074/jbc.M301410200 · DOI
- 10.1074/jbc.C100008200 · DOI · Paper page
- 10.1111/j.1600-0854.2011.01305.x · DOI
- 10.1016/0014-5793(95)01450-0 · DOI
- 10.1016/S0166-2236(02)00013-9 · DOI
- 10.1074/jbc.M113.470500 · DOI
- 10.1126/science.1230161 · DOI · Paper page
- 10.1111/j.1600-0854.2008.00766.x · DOI
- 10.1091/mbc.E10-11-0874 · DOI
- 10.1038/ncb3054 · DOI · Paper page
- 10.1111/j.1600-0854.2007.00679.x · DOI
- 10.1128/MCB.00595-08 · DOI
- 10.1146/annurev.cb.07.110191.000325 · DOI · Paper page
- 10.1172/JCI39678 · DOI · Paper page
- 10.1038/srep24045 · DOI
- 10.1182/blood-2010-07-295287 · DOI
- 10.1101/gr.2659105 · DOI · Paper page
- 10.1096/fj.02-0497fje · DOI
- 10.1074/jbc.M402820200 · DOI
- 10.1038/nn.2715 · DOI · Paper page
- 10.1038/ncb758 · DOI · Paper page
- 10.1093/jb/mvj012 · DOI
- 10.1038/ncomms7780 · DOI
- 10.1016/j.immuni.2005.12.002 · DOI
- 10.1074/jbc.271.18.10946 · DOI · Paper page
- 10.1007/s10534-012-9522-1 · DOI
- 10.1016/j.neuropharm.2013.04.035 · DOI
- 10.1111/j.1600-0854.2009.00948.x · DOI
- 10.1078/0171-9335-00374 · DOI
- 10.1073/pnas.1431613100 · DOI · Paper page
- 10.1152/physrev.00027.2001 · DOI · Paper page
- 10.1083/jcb.201307100 · DOI
- 10.1016/j.gene.2014.11.051 · DOI · Paper page
- 10.3389/fnmol.2016.00004 · DOI · Paper page
- 10.1074/jbc.273.45.30012 · DOI · Paper page
- 10.1074/jbc.M111.225615 · DOI
- 10.1038/ncb983 · DOI · Paper page
- 10.1038/embor.2012.187 · DOI
- 10.1128/JVI.00591-14 · DOI
- 10.1242/jcs.033951 · DOI · Paper page
- 10.1038/srep06992 · DOI
- Harding C, 1984, Eur J Cell Biol, 35, 256
- 10.1016/S0960-9822(99)80091-8 · DOI · Paper page
- 10.1073/pnas.250277297 · DOI · Paper page
- 10.1074/jbc.C000906200 · DOI
- 10.1074/jbc.M110443200 · DOI
- 10.1042/BJ20041241 · DOI · Paper page
- 10.1091/mbc.E07-12-1219 · DOI
- 10.1083/jcb.153.4.649 · DOI · Paper page
- 10.1016/j.devcel.2011.05.015 · DOI · Paper page
- 10.1016/j.devcel.2012.08.003 · DOI
- 10.1016/j.heares.2004.01.005 · DOI
- 10.1146/annurev.biochem.67.1.425 · DOI · Paper page
- 10.1038/sj.emboj.7600137 · DOI
- 10.1146/annurev.cellbio.19.110701.154617 · DOI · Paper page
- 10.1016/S0092-8674(00)80982-4 · DOI · Paper page
- 10.1182/blood-2002-08-2543 · DOI · Paper page
- Hideshima T, 2001, Cancer Res, 61, 3071
- 10.1083/jcb.149.1.67 · DOI · Paper page
- 10.1038/nn.2644 · DOI · Paper page
- 10.1016/j.febslet.2006.11.075 · DOI
- 10.1186/1741-7007-8-72 · DOI
- 10.1073/pnas.0904880106 · DOI
- 10.1101/gad.11.20.2701 · DOI · Paper page
- 10.1073/pnas.0707416104 · DOI · Paper page
- 10.1111/j.1600-065X.2008.00655.x · DOI
- 10.1016/j.molcel.2006.02.018 · DOI · Paper page
- 10.1073/pnas.92.7.2563 · DOI · Paper page
- 10.1146/annurev-biophys-042910-155404 · DOI
- 10.1111/j.1365-2990.1993.tb00418.x · DOI
- 10.1016/S1534-5807(02)00409-4 · DOI · Paper page
- 10.4049/jimmunol.0901521 · DOI
- 10.1371/journal.pone.0039582 · DOI
- 10.1074/jbc.M108552200 · DOI
- 10.1128/MCB.17.11.6236 · DOI
- 10.1113/JP270043 · DOI
- 10.1091/mbc.E02-08-0532 · DOI · Paper page
- 10.1038/ncb2257 · DOI · Paper page
- 10.1074/jbc.M705580200 · DOI
- 10.1096/fj.00-0191com · DOI · Paper page
- 10.1046/j.1523-1755.2001.060002466.x · DOI
- 10.1016/j.ceb.2013.11.005 · DOI · Paper page
- 10.1042/BJ20141282 · DOI
- 10.1016/j.tins.2010.02.004 · DOI
- 10.1074/jbc.M007251200 · DOI · Paper page
- 10.1034/j.1600-0854.2002.31006.x · DOI
- 10.1016/S0092-8674(01)00434-2 · DOI · Paper page
- 10.1038/nrm973 · DOI · Paper page
- 10.1016/S1097-2765(00)00134-9 · DOI · Paper page
- 10.1371/journal.pone.0053509 · DOI
- 10.1016/bs.pmbts.2015.02.005 · DOI
- 10.1016/j.neuron.2013.02.029 · DOI · Paper page
- 10.1016/j.molcel.2011.08.025 · DOI · Paper page
- 10.1091/mbc.E06-09-0861 · DOI
- 10.1111/gtc.12103 · DOI
- 10.1038/33416 · DOI · Paper page
- 10.1152/ajprenal.00441.2009 · DOI
- 10.1002/j.1460-2075.1994.tb06627.x · DOI · Paper page
- 10.1038/nrm2731 · DOI · Paper page
- 10.1074/jbc.M203018200 · DOI
- 10.1242/dev.01922 · DOI · Paper page
- 10.1182/blood-2012-10-459883 · DOI · Paper page
- 10.1074/jbc.M706974200 · DOI
- 10.1038/nature13392 · DOI · Paper page
- 10.1074/jbc.M512215200 · DOI
- 10.1073/pnas.1302792110 · DOI
- 10.1172/JCI68996 · DOI
- 10.1021/acs.jmedchem.5b00054 · DOI · Paper page
- 10.1016/S1534-5807(01)00092-2 · DOI · Paper page
- 10.1242/dev.01825 · DOI · Paper page
- 10.1073/pnas.86.4.1168 · DOI · Paper page
- Langdon WY, 1989, J Virol, 63, 5420, 10.1128/JVI.63.12.5420-5424.1989 · DOI
- 10.1371/journal.pbio.0030096 · DOI · Paper page
- 10.1093/emboj/18.13.3616 · DOI · Paper page
- 10.1016/j.cell.2010.06.011 · DOI · Paper page
- 10.1016/S1097-2765(00)80231-2 · DOI · Paper page
- 10.1210/en.2005-1313 · DOI
- 10.1371/journal.pbio.1001239 · DOI
- 10.1371/journal.pgen.1006062 · DOI
- 10.1038/onc.2009.162 · DOI
- 10.1128/JVI.77.3.1812-1819.2003 · DOI · Paper page
- 10.1111/j.1471-4159.2011.07221.x · DOI · Paper page
- 10.1073/pnas.96.11.6273 · DOI · Paper page
- 10.1182/blood-2007-08-110445 · DOI
- 10.1128/MCB.22.11.3599-3609.2002 · DOI · Paper page
- 10.2353/ajpath.2009.080861 · DOI
- 10.1074/jbc.M606643200 · doi:10.1074/jbc.m606643200
- 10.1158/1078-0432.CCR-13-2490 · DOI
- 10.1007/128_2011_157 · DOI
- 10.1042/BJ20120662 · DOI
- 10.1073/pnas.1217477109 · DOI
- 10.1523/JNEUROSCI.5944-10.2011 · DOI
- 10.2217/pgs.11.178 · doi:10.2217/pgs.11.178
- 10.1038/embor.2012.18 · DOI
- 10.1146/annurev-biochem-060210-093619 · DOI · Paper page
200 of 366 shown
Cited by
Molecular definitions of autophagy and related processes
Galluzzi, L., Baehrecke, E. H., Ballabio, A., Boya, P., Bravo‐San Pedro, J. M., Cecconi, F., Choi, A. M., Chu, C. T., Codogno, P., Colombo, M. I., et al. (2017) · The EMBO Journal · doi:10.15252/embj.201796697 · Cited by 1,646
Self-citationPost-translational modifications in proteins: resources, tools and prediction methods
Ramazi, S., & Zahiri, J. (2021) · Database · doi:10.1093/database/baab012 · Cited by 772
Zhong, Q., Xiao, X., Qiu, Y., Xu, Z., Chen, C., Chong, B., Zhao, X., Hai, S., Li, S., An, Z., et al. (2023) · MedComm · doi:10.1002/mco2.261 · Cited by 442
Lee, D., Lal, N. K., Lin, Z.-J. D., Ma, S., Liu, J., Castro, B., Toruño, T., Dinesh-Kumar, S. P., & Coaker, G. (2020) · Nature Communications · doi:10.1038/s41467-020-15601-5 · Cited by 319
Ticket to a bubble ride: Cargo sorting into exosomes and extracellular vesicles
Anand, S., Samuel, M., Kumar, S., & Mathivanan, S. (2019) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2019.02.005 · Cited by 284
Metadata
- Authors
- Foot, N., Henshall, T., & Kumar, S.
- Venue
- Physiological Reviews
- Publisher
- American Physiological Society
- Published
- 2017-01
- Volume
- 97
- Issue
- 1
- Pages
- 253-281
- ISSN
- 0031-9333 (ISSN-L)
- 1522-1210
- OpenAlex
- W2560345632
- Cited by
- 262
- References
- 25
- FWCI
- 1.12
- Type
- journal article
- Language
- en
- Open access
- closed
- Funders
- Department of Health, Australian Government | National Health and Medical Research Council (NHMRC) (1059393, 1099307, 1103006)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.