Biochemical Computation for Spine Structural Plasticity
Open accessAbstract
The structural plasticity of dendritic spines is considered to be essential for various forms of synaptic plasticity, learning, and memory. The process is mediated by a complex signaling network consisting of numerous species of molecules. Furthermore, the spatiotemporal dynamics of the biochemical signaling are regulated in a complicated manner because of geometrical restrictions from the unique morphology of the dendritic branches and spines. Recent advances in optical techniques have enabled the exploration of the spatiotemporal aspects of the signal regulations in spines and dendrites and have provided many insights into the principle of the biochemical computation that underlies spine structural plasticity.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
There is compelling evidence that CaMKII, via phosphorylation, initiates a series of actin-based cytoskeletal rearrangements in the spine.
“Indeed, there is compelling evidence that CaMKII, via phosphorylation, initiates a series of actin-based cytoskeletal rearrangements in the spine (32, 312–314).”
From Synaptic memory and CaMKII (2023) · cites this paper as [313]
The ‘Calcium sensing’ and ‘Regulation of actin cytoskeleton’ sections describe CaMKII as an early spine-specific signal in LTP and place actin-remodeling pathways downstream of it. They do not establish the claim’s specific mechanism that CaMKII initiates those rearrangements via phosphorylation. (LLM, conf=0.82)
Experimental — accuracy not yet measuredThe strongest case for the requirement of downstream CaMKII targets in sLTP, and likely LTP, is the actin cytoskeleton.
“In summary, perhaps the strongest case for the requirement of downstream CaMKII targets in sLTP, and likely LTP, is the actin cytoskeleton (30, 313, 321)”
From Synaptic memory and CaMKII (2023) · cites this paper as [313]
The Rho GTPases Cdc42 and RhoA are required for LTP and sLTP.
“and that the Rho GTPases Cdc42 and RhoA are required for LTP and sLTP (312, 313).”
From Synaptic memory and CaMKII (2023) · cites this paper as [313]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
A synaptic model of memory: long-term potentiation in the hippocampus
Bliss, T. V. P., & Collingridge, G. L. (1993) · Nature · doi:10.1038/361031a0 · Cited by 11,566 · see citing works
Structural basis of long-term potentiation in single dendritic spines
Matsuzaki, M., Honkura, N., Ellis-Davies, G. C. R., & Kasai, H. (2004) · Nature · doi:10.1038/nature02617 · Cited by 2,500 · see citing works
Synaptic tagging and long-term potentiation
Frey, U., & Morris, R. G. M. (1997) · Nature · doi:10.1038/385533a0 · Cited by 1,736 · see citing works
Dendritic spine changes associated with hippocampal long-term synaptic plasticity
Engert, F., & Bonhoeffer, T. (1999) · Nature · doi:10.1038/19978 · Cited by 1,664 · see citing works
Matsuzaki, M., Ellis-Davies, G. C. R., Nemoto, T., Miyashita, Y., Iino, M., & Kasai, H. (2001) · Nature Neuroscience · doi:10.1038/nn736 · Cited by 1,563 · see citing works
Rapid formation and selective stabilization of synapses for enduring motor memories
Xu, T., Yu, X., Perlik, A. J., Tobin, W. F., Zweig, J. A., Tennant, K., Jones, T., & Zuo, Y. (2009) · Nature · doi:10.1038/nature08389 · Cited by 1,193 · see citing works
Rapid Dendritic Morphogenesis in CA1 Hippocampal Dendrites Induced by Synaptic Activity
Maletić‐Savatić, M., Malinow, R., & Svoboda, K. (1999) · Science · doi:10.1126/science.283.5409.1923 · Cited by 1,189 · see citing works
Stably maintained dendritic spines are associated with lifelong memories
Yang, G., Pan, F., & Gan, W.-B. (2009) · Nature · doi:10.1038/nature08577 · Cited by 1,182 · see citing works
AMPA receptor trafficking at excitatory synapses
Bredt, D. S., & Nicoll, R. A. (2003) · Neuron · doi:10.1016/s0896-6273(03)00640-8 · Cited by 1,150 · see citing works
Mechanisms of CaMKII action in long-term potentiation
Lisman, J., Yasuda, R., & Raghavachari, S. (2012) · Nature Reviews Neuroscience · doi:10.1038/nrn3192 · Cited by 1,134 · see citing works
Self-citationRapid blue-light–mediated induction of protein interactions in living cells
Kennedy, M. J., Hughes, R. M., Peteya, L. A., Schwartz, J. W., Ehlers, M., & Tucker, C. L. (2010) · Nature Methods · doi:10.1038/nmeth.1524 · Cited by 1,126 · see citing works
Metaplasticity: tuning synapses and networks for plasticity
Abraham, W. C. (2008) · Nature reviews. Neuroscience · doi:10.1038/nrn2356 · Cited by 1,119 · see citing works
A genetically encoded photoactivatable Rac controls the motility of living cells
Wu, Y., Frey, D., Lungu, O. I., Jaehrig, A., Schlichting, I., Kuhlman, B. A., & Hahn, K. M. (2009) · Nature · doi:10.1038/nature08241 · Cited by 1,084 · see citing works
Harris, K., & Stevens, J. (1989) · The Journal of Neuroscience · doi:10.1523/jneurosci.09-08-02982.1989 · Cited by 1,073 · see citing works
Shrinkage of dendritic spines associated with long-term depression of hippocampal synapses
Zhou, Q., Homma, K. J., & Poo, M.-M. (2004) · Neuron · doi:10.1016/j.neuron.2004.11.011 · Cited by 1,025 · see citing works
Role for rapid dendritic protein synthesis in hippocampal mGluR-dependent long-term depression.
Huber, K., Kayser, M., & Bear, M. (2000) · Science · doi:10.1126/science.288.5469.1254 · Cited by 1,015 · see citing works
Spatiotemporal control of cell signalling using a light-switchable protein interaction
Levskaya, A., Weiner, O. D., Lim, W. A., & Voigt, C. A. (2009) · Nature · doi:10.1038/nature08446 · Cited by 1,011 · see citing works
A Requirement for Local Protein Synthesis in Neurotrophin-Induced Hippocampal Synaptic Plasticity
Kang, H., & Schuman, E. (1996) · Science · doi:10.1126/science.273.5280.1402 · Cited by 1,010 · see citing works
Quantitative ultrastructural analysis of hippocampal excitatory synapses
Schikorski, T., & Stevens, C. F. (1997) · The Journal of Neuroscience · doi:10.1523/jneurosci.17-15-05858.1997 · Cited by 997 · see citing works
Guzowski, J. F., Lyford, G. L., Stevenson, G. D., Houston, F. P., McGaugh, J. L., Worley, P. F., & Barnes, C. A. (2000) · The Journal of Neuroscience · doi:10.1523/jneurosci.20-11-03993.2000 · Cited by 992 · see citing works
Transcription Factors in Long-Term Memory and Synaptic Plasticity
Alberini, C. M. (2009) · Physiological Reviews · doi:10.1152/physrev.00017.2008 · Cited by 991 · see citing works
AMPARs and Synaptic Plasticity: The Last 25 Years
Huganir, R. L., & Nicoll, R. A. (2013) · Neuron · doi:10.1016/j.neuron.2013.10.025 · Cited by 968 · see citing works
Dendritic spines as basic functional units of neuronal integration
Yuste, R., & Denk, W. (1995) · Nature · doi:10.1038/375682a0 · Cited by 950 · see citing works
LTP promotes formation of multiple spine synapses between a single axon terminal and a dendrite
Toni, N., Buchs, P.-A., Nikonenko, I., Bron, C. R., & Muller, D. (1999) · Nature · doi:10.1038/46574 · Cited by 949 · see citing works
Translational control of long-lasting synaptic plasticity and memory
Costa-Mattioli, M., Sossin, W. S., Klann, E., & Sonenberg, N. (2009) · Neuron · doi:10.1016/j.neuron.2008.10.055 · Cited by 944 · see citing works
Dendritic Protein Synthesis, Synaptic Plasticity, and Memory
Sutton, M. A., & Schuman, E. M. (2006) · Cell · doi:10.1016/j.cell.2006.09.014 · Cited by 894 · see citing works
Okamoto, K.-I., Nagai, T., Miyawaki, A., & Hayashi, Y. (2004) · Nature Neuroscience · doi:10.1038/nn1311 · Cited by 854 · see citing works
Translational Control by MAPK Signaling in Long-Term Synaptic Plasticity and Memory
Kelleher, R. J., Govindarajan, A., Jung, H.-Y., Kang, H., & Tonegawa, S. (2004) · Cell · doi:10.1016/s0092-8674(04)00115-1 · Cited by 845 · see citing works
Arc/Arg3.1 Is Essential for the Consolidation of Synaptic Plasticity and Memories
Plath, N., Ohana, O., Dammermann, B., Errington, M. L., Schmitz, D., Gross, C., Mao, X., Engelsberg, A., Mahlke, C., Welzl, H., et al. (2006) · Neuron · doi:10.1016/j.neuron.2006.08.024 · Cited by 827 · see citing works
Making memories last: the synaptic tagging and capture hypothesis
Redondo, R. L., & Morris, R. G. M. (2011) · Nature Reviews Neuroscience · doi:10.1038/nrn2963 · Cited by 792 · see citing works
Arc/Arg3.1 interacts with the endocytic machinery to regulate AMPA receptor trafficking
Chowdhury, S., Shepherd, J. D., Okuno, H., Lyford, G., Petralia, R. S., Plath, N., Kuhl, D., Huganir, R. L., & Worley, P. F. (2006) · Neuron · doi:10.1016/j.neuron.2006.08.033 · Cited by 792 · see citing works
Ras and Rap control AMPA receptor trafficking during synaptic plasticity
Zhu, J. J., Qin, Y., Zhao, M., Van Aelst, L., & Malinow, R. (2002) · Cell · doi:10.1016/s0092-8674(02)00897-8 · Cited by 769 · see citing works
The Life Cycle of Ca2+ Ions in Dendritic Spines
Sabatini, B. L., Oertner, T. G., & Svoboda, K. (2002) · Neuron · doi:10.1016/s0896-6273(02)00573-1 · Cited by 745 · see citing works
Activation of CaMKII in single dendritic spines during long-term potentiation
Lee, S.-J. R., Escobedo-Lozoya, Y., Szatmari, E. M., & Yasuda, R. (2009) · Nature · doi:10.1038/nature07842 · Cited by 685 · see citing works
Self-citationSteward, O., & Levy, W. (1982) · The Journal of Neuroscience · doi:10.1523/jneurosci.02-03-00284.1982 · Cited by 676 · see citing works
Different modes of expression of AMPA and NMDA receptors in hippocampal synapses
Takumi, Y., Ramírez-León, V., Laake, P., Rinvik, E., & Ottersen, O. P. (1999) · Nature Neuroscience · doi:10.1038/10172 · Cited by 675 · see citing works
Importin α: a multipurpose nuclear-transport receptor
Goldfarb, D. S., Corbett, A. H., Mason, D. A., Harreman, M. T., & Adam, S. A. (2004) · Trends in Cell Biology · doi:10.1016/j.tcb.2004.07.016 · Cited by 658 · see citing works
Structural and Molecular Remodeling of Dendritic Spine Substructures during Long-Term Potentiation
Bosch, M., Castro, J., Saneyoshi, T., Matsuno, H., Sur, M., & Hayashi, Y. (2014) · Neuron · doi:10.1016/j.neuron.2014.03.021 · Cited by 637 · see citing works
Experience-dependent and cell-type-specific spine growth in the neocortex
Holtmaat, A., Wilbrecht, L., Knott, G. W., Welker, E., & Svoboda, K. (2006) · Nature · doi:10.1038/nature04783 · Cited by 631 · see citing works
Locally dynamic synaptic learning rules in pyramidal neuron dendrites
Harvey, C. D., & Svoboda, K. (2007) · Nature · doi:10.1038/nature06416 · Cited by 625 · see citing works
Protein synthesis and neurotrophin-dependent structural plasticity of single dendritic spines
Tanaka, J.-I., Horiike, Y., Matsuzaki, M., Miyazaki, T., Ellis-Davies, G. C. R., & Kasai, H. (2008) · Science · doi:10.1126/science.1152864 · Cited by 615 · see citing works
Dynamic visualization of local protein synthesis in hippocampal neurons
Aakalu, G., Smith, W. B., Nguyen, N., Jiang, C., & Schuman, E. M. (2001) · Neuron · doi:10.1016/s0896-6273(01)00295-1 · Cited by 611 · see citing works
Bidirectional Activity-Dependent Morphological Plasticity in Hippocampal Neurons
Nägerl, U. V., Eberhorn, N., Cambridge, S. B., & Bonhoeffer, T. (2004) · Neuron · doi:10.1016/j.neuron.2004.11.016 · Cited by 602 · see citing works
Activity-Dependent Regulation of MEF2 Transcription Factors Suppresses Excitatory Synapse Number
Flavell, S. W., Cowan, C. W., Kim, T.-K., Greer, P. L., Lin, Y., Paradis, S., Griffith, E. C., Hu, L. S., Chen, C., & Greenberg, M. E. (2006) · Science · doi:10.1126/science.1122511 · Cited by 573 · see citing works
Local, persistent activation of Rho GTPases during plasticity of single dendritic spines
Murakoshi, H., Wang, H., & Yasuda, R. (2011) · Nature · doi:10.1038/nature09823 · Cited by 564 · see citing works
Self-citationRegulation of AMPA receptor lateral movements
Borgdorff, A. J., & Choquet, D. (2002) · Nature · doi:10.1038/nature00780 · Cited by 542 · see citing works
Cheng, D., Hoogenraad, C. C., Rush, J., Ramm, E., Schlager, M. A., Duong, D. M., Xu, P., Wijayawardana, S. R., Hanfelt, J., Nakagawa, T., et al. (2006) · Molecular & Cellular Proteomics · doi:10.1074/mcp.d500009-mcp200 · Cited by 510 · see citing works
Plasticity-induced growth of dendritic spines by exocytic trafficking from recycling endosomes
Park, M., Salgado, J. M., Ostroff, L., Helton, T. D., Robinson, C. G., Harris, K. M., & Ehlers, M. D. (2006) · Neuron · doi:10.1016/j.neuron.2006.09.040 · Cited by 493 · see citing works
The Subspine Organization of Actin Fibers Regulates the Structure and Plasticity of Dendritic Spines
Honkura, N., Matsuzaki, M., Noguchi, J., Ellis-Davies, G. C. R., & Kasai, H. (2008) · Neuron · doi:10.1016/j.neuron.2008.01.013 · Cited by 490 · see citing works
Repetitive motor learning induces coordinated formation of clustered dendritic spines in vivo
Fu, M., Yu, X., Lu, J., & Zuo, Y. (2012) · Nature · doi:10.1038/nature10844 · Cited by 478 · see citing works
Direct measurement of coupling between dendritic spines and shafts
Svoboda, K., Tank, D. W., & Denk, W. (1996) · Science · doi:10.1126/science.272.5262.716 · Cited by 472 · see citing works
Rapid turnover of actin in dendritic spines and its regulation by activity
Star, E. N., Kwiatkowski, D. J., & Murthy, V. N. (2002) · Nature Neuroscience · doi:10.1038/nn811 · Cited by 465 · see citing works
Ostroff, L. E., Fiala, J. C., Allwardt, B., & Harris, K. M. (2002) · Neuron · doi:10.1016/s0896-6273(02)00785-7 · Cited by 461 · see citing works
Spine neck plasticity regulates compartmentalization of synapses
Tønnesen, J., Katona, G., Rózsa, B., & Nägerl, U. V. (2014) · Nature Neuroscience · doi:10.1038/nn.3682 · Cited by 444 · see citing works
Takizawa, P. A., DeRisi, J. L., Wilhelm, J. E., & Vale, R. D. (2000) · Science · doi:10.1126/science.290.5490.341 · Cited by 440 · see citing works
The Spread of Ras Activity Triggered by Activation of a Single Dendritic Spine
Harvey, C. D., Yasuda, R., Zhong, H., & Svoboda, K. (2008) · Science · doi:10.1126/science.1159675 · Cited by 434 · see citing works
Self-citationSpine-Neck Geometry Determines NMDA Receptor-Dependent Ca2+ Signaling in Dendrites
Noguchi, J., Matsuzaki, M., Ellis-Davies, G. C. R., & Kasai, H. (2005) · Neuron · doi:10.1016/j.neuron.2005.03.015 · Cited by 419 · see citing works
Korobova, F., & Svitkina, T. (2010) · Molecular Biology of the Cell · doi:10.1091/mbc.e09-07-0596 · Cited by 399 · see citing works
Balance and Stability of Synaptic Structures during Synaptic Plasticity
Meyer, D., Bonhoeffer, T., & Scheuss, V. (2014) · Neuron · doi:10.1016/j.neuron.2014.02.031 · Cited by 395 · see citing works
Opposite effects of fear conditioning and extinction on dendritic spine remodelling.
Lai, C. S. W., Franke, T. F., & Gan, W.-B. (2012) · Nature · doi:10.1038/nature10792 · Cited by 392 · see citing works
A Role of Actin Filament in Synaptic Transmission and Long-Term Potentiation
Kim, C.-H., & Lisman, J. E. (1999) · The Journal of Neuroscience · doi:10.1523/jneurosci.19-11-04314.1999 · Cited by 386 · see citing works
Induction of protein-protein interactions in live cells using light
Yazawa, M., Sadaghiani, A. M., Hsueh, B., & Dolmetsch, R. E. (2009) · Nature Biotechnology · doi:10.1038/nbt.1569 · Cited by 377 · see citing works
Krucker, T., Siggins, G. R., & Halpain, S. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.100139797 · Cited by 374 · see citing works
Glutamate induces de novo growth of functional spines in developing cortex
Kwon, H.-B., & Sabatini, B. L. (2011) · Nature · doi:10.1038/nature09986 · Cited by 368 · see citing works
A clustered plasticity model of long-term memory engrams.
Govindarajan, A., Kelleher, R. J., & Tonegawa, S. (2006) · Nature reviews. Neuroscience · doi:10.1038/nrn1937 · Cited by 355 · see citing works
The single dendritic branch as a fundamental functional unit in the nervous system
Branco, T., & Häusser, M. (2010) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2010.07.009 · Cited by 355 · see citing works
Locally synchronized synaptic inputs
Takahashi, N., Kitamura, K., Matsuo, N., Mayford, M., Kano, M., Matsuki, N., & Ikegaya, Y. (2012) · Science · doi:10.1126/science.1210362 · Cited by 352 · see citing works
The Dendritic Branch Is the Preferred Integrative Unit for Protein Synthesis-Dependent LTP
Govindarajan, A., Israely, I., Huang, S.-Y., & Tonegawa, S. (2011) · Neuron · doi:10.1016/j.neuron.2010.12.008 · Cited by 349 · see citing works
Neuronal activity regulates diffusion across the neck of dendritic spines
Bloodgood, B. L., & Sabatini, B. L. (2005) · Science · doi:10.1126/science.1114816 · Cited by 344 · see citing works
ADF/cofilin-mediated actin dynamics regulate AMPA receptor trafficking during synaptic plasticity
Gu, J., Lee, C. W., Fan, Y., Komlos, D., Tang, X., Sun, C., Yu, K., Hartzell, H. C., Chen, G., Bamburg, J. R., et al. (2010) · Nature Neuroscience · doi:10.1038/nn.2634 · Cited by 325 · see citing works
Barral, Y., Mermall, V., Mooseker, M. S., & Snyder, M. P. (2000) · Molecular Cell · doi:10.1016/s1097-2765(00)80324-x · Cited by 322 · see citing works
Synaptic calcium transients in single spines indicate that NMDA receptors are not saturated
Mainen, Z. F., Malinow, R., & Svoboda, K. (1999) · Nature · doi:10.1038/20187 · Cited by 314 · see citing works
Inverse synaptic tagging of inactive synapses via dynamic interaction of Arc/Arg3.1 with CaMKIIβ
Okuno, H., Akashi, K., Ishii, Y., Yagishita-Kyo, N., Suzuki, K., Nonaka, M., Kawashima, T., Fujii, H., Takemoto-Kimura, S., Abe, M., et al. (2012) · Cell · doi:10.1016/j.cell.2012.02.062 · Cited by 310 · see citing works
Visualization of changes in presynaptic function during long-term synaptic plasticity
Zakharenko, S. S., Zablow, L., & Siegelbaum, S. A. (2001) · Nature Neuroscience · doi:10.1038/89498 · Cited by 305 · see citing works
Expression of NMDA receptor-dependent LTP in the hippocampus: bridging the divide
Bliss, T. V., & Collingridge, G. L. (2013) · Molecular Brain · doi:10.1186/1756-6606-6-5 · Cited by 305 · see citing works
Barbosa, A. C., Kim, M.-S., Ertunc, M., Adachi, M., Nelson, E. D., McAnally, J., Richardson, J. A., Kavalali, E. T., Monteggia, L. M., Bassel-Duby, R., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0802679105 · Cited by 303 · see citing works
Dendritic spines and distributed circuits
Yuste, R. (2011) · Neuron · doi:10.1016/j.neuron.2011.07.024 · Cited by 298 · see citing works
Optical Control of Protein Activity by Fluorescent Protein Domains
Zhou, X. X., Chung, H. K., Lam, A. J., & Lin, M. Z. (2012) · Science · doi:10.1126/science.1226854 · Cited by 289 · see citing works
Synaptic amplification by dendritic spines enhances input cooperativity
Harnett, M. T., Makara, J. K., Spruston, N., Kath, W. L., & Magee, J. C. (2012) · Nature · doi:10.1038/nature11554 · Cited by 288 · see citing works
Role of Septin Cytoskeleton in Spine Morphogenesis and Dendrite Development in Neurons
Tada, T., Simonetta, A., Batterton, M. N., Kinoshita, M., Edbauer, D., & Sheng, M. (2007) · Current Biology · doi:10.1016/j.cub.2007.09.039 · Cited by 284 · see citing works
Cocaine Regulates MEF2 to Control Synaptic and Behavioral Plasticity
Pulipparacharuvil, S., Renthal, W., Hale, C. F., Taniguchi, M., Xiao, G., Kumar, A., Russo, S. J., Sikder, D., Dewey, C. M., Davis, M. M., et al. (2008) · Neuron · doi:10.1016/j.neuron.2008.06.020 · Cited by 281 · see citing works
Harreveld, A. V., & Fifkova´, E. (1975) · Experimental Neurology · doi:10.1016/0014-4886(75)90055-2 · Cited by 280 · see citing works
Single β-Actin mRNA Detection in Neurons Reveals a Mechanism for Regulating Its Translatability
Buxbaum, A. R., Wu, B., & Singer, R. H. (2014) · Science · doi:10.1126/science.1242939 · Cited by 280 · see citing works
Desmond, N. L., & Levy, W. B. (1983) · Brain Research · doi:10.1016/0006-8993(83)91329-x · Cited by 276 · see citing works
Araki, Y., Zeng, M., Zhang, M., & Huganir, R. L. (2015) · Neuron · doi:10.1016/j.neuron.2014.12.023 · Cited by 271 · see citing works
NMDA Receptor-Mediated Subthreshold Ca2+Signals in Spines of Hippocampal Neurons
Kovalchuk, Y., Eilers, J., Lisman, J. E., & Konnerth, A. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-05-01791.2000 · Cited by 270 · see citing works
Frost, N. A., Shroff, H., Kong, H., Betzig, E., & Blanpied, T. A. (2010) · Neuron · doi:10.1016/j.neuron.2010.05.026 · Cited by 263 · see citing works
Synaptic clustering by dendritic signalling mechanisms
Larkum, M. E., & Nevian, T. (2008) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2008.08.013 · Cited by 262 · see citing works
Yasuda, R., Harvey, C. D., Zhong, H., Sobczyk, A., Aelst, L. V., & Svoboda, K. (2006) · Nature Neuroscience · doi:10.1038/nn1635 · Cited by 261 · see citing works
Self-citationPatterson, M. A., Szatmari, E. M., & Yasuda, R. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0913875107 · Cited by 259 · see citing works
Self-citationSteiner, P., Higley, M. J., Xu, W., Czervionke, B. L., Malenka, R. C., & Sabatini, B. L. (2008) · Neuron · doi:10.1016/j.neuron.2008.10.014 · Cited by 259 · see citing works
The spine neck filters membrane potentials
Araya, R., Jiang, J., Eisenthal, K. B., & Yuste, R. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0608755103 · Cited by 258 · see citing works
The GTP-Binding Protein Septin 7 Is Critical for Dendrite Branching and Dendritic-Spine Morphology
Xie, Y., Vessey, J. P., Konecna, A., Dahm, R., Macchi, P., & Kiebler, M. A. (2007) · Current Biology · doi:10.1016/j.cub.2007.08.042 · Cited by 255 · see citing works
Activity-Dependent Clustering of Functional Synaptic Inputs on Developing Hippocampal Dendrites
Kleindienst, T., Winnubst, J., Roth-Alpermann, C., Bonhoeffer, T., & Löhmann, C. (2011) · Neuron · doi:10.1016/j.neuron.2011.10.015 · Cited by 247 · see citing works
Lang, C., Barco, A., Zablow, L., Kandel, E. R., Siegelbaum, S. A., & Zakharenko, S. S. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407581101 · Cited by 245 · see citing works
GluR1 Links Structural and Functional Plasticity at Excitatory Synapses
Kopec, C. D., Réal, É., Kessels, H. W. H. G., & Malinow, R. (2007) · Journal of Neuroscience · doi:10.1523/jneurosci.3503-07.2007 · Cited by 220 · see citing works
Compartmentalized versus Global Synaptic Plasticity on Dendrites Controlled by Experience
Makino, H., & Malinow, R. (2011) · Neuron · doi:10.1016/j.neuron.2011.09.036 · Cited by 219 · see citing works
Reversible protein inactivation by optogenetic trapping in cells
Lee, S., Park, H., Kyung, T., Kim, N. Y., Kim, S., Kim, J.-H., & Heo, W. D. (2014) · Nature Methods · doi:10.1038/nmeth.2940 · Cited by 218 · see citing works
Computational study of an excitable dendritic spine
Segev, I., & Rall, W. (1988) · Journal of Neurophysiology · doi:10.1152/jn.1988.60.2.499 · Cited by 217 · see citing works
Activity-Dependent Transport of the Transcriptional Coactivator CRTC1 from Synapse to Nucleus
Ch’ng, T. H., Uzgil, B., Lin, P., Avliyakulov, N. K., O’Dell, T. J., & Martin, K. C. (2012) · Cell · doi:10.1016/j.cell.2012.05.027 · Cited by 206 · see citing works
Ploski, J. E., Pierre, V. J., Smucny, J., Park, K., Monsey, M. S., Overeem, K. A., & Schafe, G. E. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.1662-08.2008 · Cited by 203 · see citing works
Activity-dependent dendritic spine neck changes are correlated with synaptic strength
Araya, R., Vogels, T. P., & Yuste, R. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1321869111 · Cited by 197 · see citing works
Okamoto, K., Bosch, M., & Hayashi, Y. (2009) · Physiology · doi:10.1152/physiol.00029.2009 · Cited by 197 · see citing works
Synapse elimination accompanies functional plasticity in hippocampal neurons
Bastrikova, N., Gardner, G. A., Reece, J. M., Jeromin, A., & Dudek, S. M. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0800027105 · Cited by 195 · see citing works
Karpova, A., Mikhaylova, M., Bera, S., Bär, J., Reddy, P. P., Behnisch, T., Rankovic, V., Spilker, C., Bethge, P., Şahin, J., et al. (2013) · Cell · doi:10.1016/j.cell.2013.02.002 · Cited by 194 · see citing works
GABA promotes the competitive selection of dendritic spines by controlling local Ca2+ signaling
Hayama, T., Noguchi, J., Watanabe, S., Takahashi, N., Hayashi-Takagi, A., Ellis-Davies, G. C. R., Matsuzaki, M., & Kasai, H. (2013) · Nature Neuroscience · doi:10.1038/nn.3496 · Cited by 193 · see citing works
Electrical compartmentalization in dendritic spines
Yuste, R. (2013) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-062111-150455 · Cited by 180 · see citing works
Kovács, K. A., Steullet, P., Steinmann, M., Kim, Q., Magistretti, P. J., Halfon, O., & Cardinaux, J. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0607524104 · Cited by 179 · see citing works
Protracted synaptogenesis after activity-dependent spinogenesis in hippocampal neurons
Nägerl, U. V., Köstinger, G., Anderson, J. C., Martin, K. A. C., & Bonhoeffer, T. (2007) · The Journal of Neuroscience · doi:10.1523/jneurosci.0511-07.2007 · Cited by 178 · see citing works
Smith, K. R., Kopeikina, K. J., Fawcett‐Patel, J. M., Leaderbrand, K., Gao, R., Schürmann, B., Myczek, K., Radulović, J., Swanson, G. T., & Penzes, P. (2014) · Neuron · doi:10.1016/j.neuron.2014.10.010 · Cited by 177 · see citing works
Visualization of NMDA receptor–dependent AMPA receptor synaptic plasticity in vivo
Zhang, Y., Cudmore, R. H., Lin, D., Linden, D. J., & Huganir, R. L. (2015) · Nature Neuroscience · doi:10.1038/nn.3936 · Cited by 176 · see citing works
Kim, I. H., Racz, B., Wang, H., Burianek, L., Weinberg, R., Yasuda, R., Wetsel, W. C., & Soderling, S. H. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.0035-13.2013 · Cited by 172 · see citing works
Self-citationOh, W. C., Hill, T. C., & Zito, K. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1214705110 · Cited by 163 · see citing works
Enoki, R., Hu, Y.-L., Hamilton, D. C., & Fine, A. (2009) · Neuron · doi:10.1016/j.neuron.2009.02.026 · Cited by 158 · see citing works
Yasuda, R. (2006) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2006.08.012 · Cited by 157 · see citing works
Self-citationSpine neck plasticity controls postsynaptic calcium signals through electrical compartmentalization
Grunditz, Å., Holbro, N., Tian, L., Zuo, Y., & Oertner, T. G. (2008) · The Journal of Neuroscience · doi:10.1523/jneurosci.2702-08.2008 · Cited by 157 · see citing works
Activation of protein splicing with light in yeast
Tyszkiewicz, A. B., & Muir, T. W. (2008) · Nature Methods · doi:10.1038/nmeth.1189 · Cited by 155 · see citing works
Visualization of Synaptic Ca2+/Calmodulin-Dependent Protein Kinase II Activity in Living Neurons
Takao, K., Okamoto, K., Nakagawa, T., Neve, R. L., Nagai, T., Miyawaki, A., Hashikawa, T., Kobayashi, S., & Hayashi, Y. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.0085-05.2005 · Cited by 150 · see citing works
Heterosynaptic Structural Plasticity on Local Dendritic Segments of Hippocampal CA1 Neurons
Oh, W. C., Parajuli, L. K., & Zito, K. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.12.016 · Cited by 142 · see citing works
Chazeau, A., Mehidi, A., Nair, D. K., Gautier, J. J., Leduc, C., Chamma, I., Kage, F., Kechkar, A., Thoumine, O. R., Rottner, K., et al. (2014) · The EMBO Journal · doi:10.15252/embj.201488837 · Cited by 141 · see citing works
Synapse to Nucleus Signaling during Long-Term Synaptic Plasticity
Thompson, K. R., Olofsdotter, K., Chen, D. Y., Zhao, Y., O’Dell, T. J., & Martin, K. C. (2004) · Neuron · doi:10.1016/j.neuron.2004.11.025 · Cited by 141 · see citing works
Long-term depression triggers the selective elimination of weakly integrated synapses
Wiegert, J. S., & Oertner, T. G. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1315926110 · Cited by 139 · see citing works
MEF2 negatively regulates learning-induced structural plasticity and memory formation
Cole, C. J., Mercaldo, V., Restivo, L., Yiu, A. P., Sekeres, M. J., Han, J., Vetere, G., Pekar, T., Ross, P. J., Neve, R. L., et al. (2012) · Nature Neuroscience · doi:10.1038/nn.3189 · Cited by 131 · see citing works
Ramachandran, B., & Frey, J. U. (2009) · Journal of Neuroscience · doi:10.1523/jneurosci.2045-09.2009 · Cited by 130 · see citing works
LTP-Induced Long-Term Stabilization of Individual Nascent Dendritic Spines
Hill, T. C., & Zito, K. (2013) · Journal of Neuroscience · doi:10.1523/jneurosci.1404-12.2013 · Cited by 129 · see citing works
Dynamics of dendritic spines in the mouse auditory cortex during memory formation and memory recall.
Moczulska, K. E., Tinter-Thiede, J., Peter, M., Ushakova, L., Wernle, T., Bathellier, B., & Rumpel, S. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1312508110 · Cited by 127 · see citing works
Exploration of Signal Transduction Pathways in Cerebellar Long-Term Depression by Kinetic Simulation
Kuroda, S., Schweighofer, N., & Kawato, M. (2001) · Journal of Neuroscience · doi:10.1523/jneurosci.21-15-05693.2001 · Cited by 124 · see citing works
Requirement of TORC1 for Late-Phase Long-Term Potentiation in the Hippocampus
Zhou, Y., Wu, H., Li, S., Chen, Q., Cheng, X., Zheng, J., Takemori, H., & Xiong, Z. (2006) · PLoS ONE · doi:10.1371/journal.pone.0000016 · Cited by 119 · see citing works
Biphasic synaptic Ca influx arising from compartmentalized electrical signals in dendritic spines
Bloodgood, B. L., Giessel, A. J., & Sabatini, B. L. (2009) · PLoS Biology · doi:10.1371/journal.pbio.1000190 · Cited by 119 · see citing works
Loss of Cdc42 leads to defects in synaptic plasticity and remote memory recall
Kim, I. H., Wang, H., Soderling, S. H., & Yasuda, R. (2014) · eLife · doi:10.7554/elife.02839 · Cited by 116 · see citing works
Self-citationLong-Distance Integration of Nuclear ERK Signaling Triggered by Activation of a Few Dendritic Spines
Zhai, S., Ark, E. D., Parra-Bueno, P., & Yasuda, R. (2013) · Science · doi:10.1126/science.1245622 · Cited by 115 · see citing works
Self-citationA positive feedback signal transduction loop determines timing of cerebellar long-term depression
Tanaka, K., & Augustine, G. (2008) · Neuron · doi:10.1016/j.neuron.2008.06.026 · Cited by 112 · see citing works
Activity-Dependent Plasticity of the NMDA-Receptor Fractional Ca2+ Current
Sobczyk, A., & Svoboda, K. (2007) · Neuron · doi:10.1016/j.neuron.2006.11.016 · Cited by 106 · see citing works
Region-Specific Activation of CRTC1-CREB Signaling Mediates Long-Term Fear Memory
Nonaka, M., Kim, R., Fukushima, H., Sasaki, K., Suzuki, K., Okamura, M., Ishii, Y., Kawashima, T., Kamijo, S., Takemoto‐Kimura, S., et al. (2014) · Neuron · doi:10.1016/j.neuron.2014.08.049 · Cited by 106 · see citing works
Input-Specific Spine Entry of Soma-Derived Vesl-1S Protein Conforms to Synaptic Tagging
Okada, D., Ozawa, F., & Inokuchi, K. (2009) · Science · doi:10.1126/science.1171498 · Cited by 105 · see citing works
A Septin-Dependent Diffusion Barrier at Dendritic Spine Necks
Ewers, H., Tada, T., Petersen, J. D., Rácz, B., Sheng, M., & Choquet, D. (2014) · PLoS ONE · doi:10.1371/journal.pone.0113916 · Cited by 104 · see citing works
Protein synthesis‐dependent LTP in isolated dendrites of CA1 pyramidal cells
Cracco, J., Serrano, P., Moskowitz, S. I., Bergold, P., & Sacktor, T. (2005) · Hippocampus · doi:10.1002/hipo.20078 · Cited by 101 · see citing works
Independent Expression of Synaptic and Morphological Plasticity Associated with Long-Term Depression
Wang, X.-B., Yang, Y., & Zhou, Q. (2007) · The Journal of Neuroscience · doi:10.1523/jneurosci.2015-07.2007 · Cited by 100 · see citing works
Late-phase long-term potentiation: getting to the nucleus
Adams, J. P., & Dudek, S. M. (2005) · Nature reviews. Neuroscience · doi:10.1038/nrn1749 · Cited by 98 · see citing works
Abraham, W. C., Christie, B. R., Logan, B. J., Lawlor, P. A., & Dragunow, M. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.21.10049 · Cited by 95 · see citing works
Fujii, H., Inoue, M., Okuno, H., Sano, Y., Takemoto‐Kimura, S., Kitamura, K., Kano, M., & Bito, H. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.03.033 · Cited by 94 · see citing works
Nucleocytoplasmic protein shuttling: the direct route in synapse-to-nucleus signaling
Jordan, B. A., & Kreutz, M. R. (2009) · Trends in Neurosciences · doi:10.1016/j.tins.2009.04.001 · Cited by 90 · see citing works
Doyère, V., Srebro, B., & Laroche, S. (1997) · Journal of Neurophysiology · doi:10.1152/jn.1997.77.2.571 · Cited by 80 · see citing works
Organization of the Arp2/3 Complex in Hippocampal Spines
Rácz, B., & Weinberg, R. J. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.0756-08.2008 · Cited by 78 · see citing works
Ch’ng, T. H., & Martin, K. C. (2011) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2011.01.011 · Cited by 73 · see citing works
A drug-controllable tag for visualizing newly synthesized proteins in cells and whole animals
Lin, M. Z., Glenn, J. S., & Tsien, R. Y. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0803060105 · Cited by 72 · see citing works
Fluorescent and photo-oxidizing TimeSTAMP tags track protein fates in light and electron microscopy
Butko, M. T., Yang, J. Y., Yang, G., Kim, H. J., Jeon, N. L., Shu, X., Mackey, M. R., Ellisman, M. H., Tsien, R. Y., & Lin, M. Z. (2012) · Nature Neuroscience · doi:10.1038/nn.3246 · Cited by 72 · see citing works
Sdrulla, A. D., & Linden, D. J. (2007) · Nature Neuroscience · doi:10.1038/nn1889 · Cited by 66 · see citing works
Bywalez, W. G., Patirniche, D., Rupprecht, V., Stemmler, M., Herz, A. V. M., Pálfi, D., Rózsa, B. J., & Egger, V. (2015) · Neuron · doi:10.1016/j.neuron.2014.12.051 · Cited by 55 · see citing works
Jeffrey, R., Ch’ng, T. H., O’Dell, T. J., & Martin, K. C. (2009) · Journal of Neuroscience · doi:10.1523/jneurosci.3314-09.2009 · Cited by 53 · see citing works
Neurofibromin Is the Major Ras Inactivator in Dendritic Spines
Oliveira, A. F., & Yasuda, R. (2014) · Journal of Neuroscience · doi:10.1523/jneurosci.3096-13.2014 · Cited by 52 · see citing works
Self-citationThe mechanisms underlying the spatial spreading of signaling activity
Yasuda, R., & Murakoshi, H. (2011) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2011.02.008 · Cited by 41 · see citing works
Self-citationStudying Signal Transduction in Single Dendritic SpinesPreprint
Yasuda, R. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a005611 · Cited by 32 · see citing works
Self-citation
Flagged first, then by citations
1 of the 154 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Neuroscience-Inspired Artificial Intelligence
Hassabis, D., Kumaran, D., Summerfield, C., & Botvinick, M. (2017) · Neuron · doi:10.1016/j.neuron.2017.06.011 · Cited by 1,557 · see citing works
Tang, J., Yuan, F., Shen, X., Wang, Z., Rao, M., He, Y., Sun, Y., Li, X., Zhang, W., Li, Y., et al. (2019) · Advanced Materials · doi:10.1002/adma.201902761 · Cited by 842 · see citing works
Ultrastructural evidence for synaptic scaling across the wake/sleep cycle
de Vivo, L., Bellesi, M., Marshall, W., Bushong, E. A., Ellisman, M. H., Tononi, G., & Cirelli, C. (2017) · Science · doi:10.1126/science.aah5982 · Cited by 574 · see citing works
Zeng, M., Shang, Y., Araki, Y., Guo, T., Huganir, R. L., & Zhang, M. (2016) · Cell · doi:10.1016/j.cell.2016.07.008 · Cited by 598 · see citing works
Zeng, M., Chen, X., Guan, D., Xu, J., Wu, H., Tong, P., & Zhang, M. (2018) · Cell · doi:10.1016/j.cell.2018.06.047 · Cited by 438 · see citing works
Phase separation at the synapse
Chen, X., Wu, X., Wu, H., & Zhang, M. (2020) · Nature Neuroscience · doi:10.1038/s41593-019-0579-9 · Cited by 261 · see citing works
Dendritic Spine Plasticity: Function and Mechanisms
Runge, K., Cardoso, C., & de Chevigny, A. (2020) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2020.00036 · Cited by 224 · see citing works
Mikuni, T., Nishiyama, J., Sun, Y., Kamasawa, N., & Yasuda, R. (2016) · Cell · doi:10.1016/j.cell.2016.04.044 · Cited by 214 · see citing works
Self-citationMechanistic basis of MAGUK-organized complexes in synaptic development and signalling
Zhu, J., Shang, Y., & Zhang, M. (2016) · Nature reviews. Neuroscience · doi:10.1038/nrn.2016.18 · Cited by 209 · see citing works
Plasticity of Spine Structure: Local Signaling, Translation and Cytoskeletal Reorganization
Nakahata, Y., & Yasuda, R. (2018) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2018.00029 · Cited by 209 · see citing works
Self-citationFunctional clustering of dendritic activity during decision-making
Kerlin, A., Mohar, B., Flickinger, D., MacLennan, B. J., Dean, M. B., Davis, C., Spruston, N., & Svoboda, K. (2019) · eLife · doi:10.7554/elife.46966 · Cited by 181 · see citing works
Multiphoton fluorescence microscopy for in vivo imaging
Xu, C., Nedergaard, M., Fowell, D. J., Friedl, P., & Ji, N. (2024) · Cell · doi:10.1016/j.cell.2024.07.036 · Cited by 172 · see citing works
Chang, J.-Y., Parra-Bueno, P., Laviv, T., Szatmari, E. M., Lee, S.-J. R., & Yasuda, R. (2017) · Neuron · doi:10.1016/j.neuron.2017.04.041 · Cited by 161 · see citing works
Self-citationDendritic Spines as Tunable Regulators of Synaptic Signals
Tønnesen, J., & Nägerl, U. V. (2016) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2016.00101 · Cited by 136 · see citing works
Nicoll, R. A., & Schulman, H. (2023) · Physiological Reviews · doi:10.1152/physrev.00034.2022 · Cited by 126 · see citing works
“Previous studies have shown that the Rho GTPase Rac1 regulates synaptic AMPAR expression (311) and that the Rho GTPases Cdc42 and RhoA are required for LTP and sLTP (312, 313).”
BackgroundDendritic spines: Morphological building blocks of memory
Segal, M. (2016) · Neurobiology of Learning and Memory · doi:10.1016/j.nlm.2016.06.007 · Cited by 123 · see citing works
Formation and Maintenance of Functional Spines in the Absence of Presynaptic Glutamate Release
Sigler, A., Oh, W. C., Imig, C., Altas, B., Kawabe, H., Cooper, B. H., Kwon, H., Rhee, J., & Brose, N. (2017) · Neuron · doi:10.1016/j.neuron.2017.03.029 · Cited by 123 · see citing works
Local Order within Global Disorder: Synaptic Architecture of Visual Space
Scholl, B., Wilson, D. E., & Fitzpatrick, D. (2017) · Neuron · doi:10.1016/j.neuron.2017.10.017 · Cited by 113 · see citing works
From Brain Science to Artificial Intelligence
Fan, J., Fang, L., Wu, J., Guo, Y., & Dai, Q. (2020) · Engineering · doi:10.1016/j.eng.2019.11.012 · Cited by 118 · see citing works
Liquid-Liquid Phase Separation in Neuronal Development and Synaptic Signaling
Wu, X., Cai, Q., Feng, Z., & Zhang, M. (2020) · Developmental Cell · doi:10.1016/j.devcel.2020.06.012 · Cited by 114 · see citing works
The Role of Actin Cytoskeleton in Dendritic Spines in the Maintenance of Long-Term Memory
Basu, S., & Lamprecht, R. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00143 · Cited by 108 · see citing works
Cortical response selectivity derives from strength in numbers of synapses
Scholl, B., Thomas, C. I., Ryan, M. A., Kamasawa, N., & Fitzpatrick, D. (2020) · Nature · doi:10.1038/s41586-020-03044-3 · Cited by 100 · see citing works
Imaging ERK and PKA Activation in Single Dendritic Spines during Structural Plasticity
Tang, S., & Yasuda, R. (2017) · Neuron · doi:10.1016/j.neuron.2017.02.032 · Cited by 108 · see citing works
Self-citationHagendorff, T. (2021) · AI and Ethics · doi:10.1007/s43681-021-00122-8 · Cited by 105 · see citing works
A Dendrite-Focused Framework for Understanding the Actions of Ketamine and Psychedelics
Savalia, N. K., Shao, L.-X., & Kwan, A. C. (2021) · Trends in Neurosciences · doi:10.1016/j.tins.2020.11.008 · Cited by 104 · see citing works
Mapping molecular assemblies with fluorescence microscopy and object-based spatial statistics
Lagache, T., Grassart, A., Dallongeville, S., Faklaris, O., Sauvonnet, N., Dufour, A., Danglot, L., & Olivo‐Marín, J. (2018) · Nature Communications · doi:10.1038/s41467-018-03053-x · Cited by 103 · see citing works
Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins
Laviv, T., Kim, B. B., Chu, J., Lam, A. J., Lin, M. Z., & Yasuda, R. (2016) · Nature Methods · doi:10.1038/nmeth.4046 · Cited by 99 · see citing works
Self-citationSilent synapses dictate cocaine memory destabilization and reconsolidation
Wright, W. J., Graziane, N., Neumann, P. A., Hamilton, P. J., Cates, H. M., Fuerst, L., Spenceley, A., MacKinnon-Booth, N., Iyer, K., Huang, Y. H., et al. (2019) · Nature Neuroscience · doi:10.1038/s41593-019-0537-6 · Cited by 98 · see citing works
Dendritic Spine Elimination: Molecular Mechanisms and Implications
Stein, I. S., & Zito, K. (2018) · The Neuroscientist · doi:10.1177/1073858418769644 · Cited by 102 · see citing works
Colgan, L. A., Hu, M., Misler, J. A., Parra-Bueno, P., Moran, C., Leitges, M., & Yasuda, R. (2018) · Nature Neuroscience · doi:10.1038/s41593-018-0184-3 · Cited by 98 · see citing works
Self-citationA spike-timing-dependent plasticity rule for dendritic spines
Tazerart, S., Mitchell, D. E., Miranda‐Rottmann, S., & Araya, R. (2020) · Nature Communications · doi:10.1038/s41467-020-17861-7 · Cited by 93 · see citing works
Ju, F., Ran, Y., Zhu, L., Cheng, X., Gao, H., Xi, X., Yang, Z., & Zhang, S. (2018) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2018.00236 · Cited by 95 · see citing works
Spano, G. M., Banningh, S. W., Marshall, W., de Vivo, L., Bellesi, M., Loschky, S. S., Tononi, G., & Cirelli, C. (2019) · Journal of Neuroscience · doi:10.1523/jneurosci.0380-19.2019 · Cited by 96 · see citing works
Plasticity of dendritic spines: Molecular function and dysfunction in neurodevelopmental disorders
Nishiyama, J. (2019) · Psychiatry and Clinical Neurosciences · doi:10.1111/pcn.12899 · Cited by 92 · see citing works
Self-citationBiophysics of Biochemical Signaling in Dendritic Spines: Implications in Synaptic Plasticity
Yasuda, R. (2017) · Biophysical Journal · doi:10.1016/j.bpj.2017.07.029 · Cited by 85 · see citing works
Self-citationSynaptic Tenacity or Lack Thereof: Spontaneous Remodeling of Synapses
Ziv, N. E., & Brenner, N. (2017) · Trends in Neurosciences · doi:10.1016/j.tins.2017.12.003 · Cited by 87 · see citing works
Organization and dynamics of the actin cytoskeleton during dendritic spine morphological remodeling
Chazeau, A., & Giannone, G. (2016) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-016-2214-1 · Cited by 85 · see citing works
Bell, M. K., Bartol, T., B, T. J. S. A., & Rangamani, P. (2019) · The Journal of General Physiology · doi:10.1085/jgp.201812261 · Cited by 80 · see citing works
A family of photoswitchable NMDA receptors
Berlin, S., Szobota, S., Reiner, A., Carroll, E. C., Kienzler, M. A., Guyon, A., Xiao, T., Trauner, D. H., & Isacoff, E. Y. (2016) · eLife · doi:10.7554/elife.12040 · Cited by 79 · see citing works
Ras and Rap signal bidirectional synaptic plasticity via distinct subcellular microdomains
Zhang, L., Zhang, P., Wang, G.-F., Zhang, H.-Y., Zhang, Y., Yu, Y., Zhang, M.-X., Xiao, J., Crespo, P., Hell, J. W., et al. (2018) · Neuron · doi:10.1016/j.neuron.2018.03.049 · Cited by 77 · see citing works
Nakayama, K., Ohashi, R., Shinoda, Y., Yamazaki, M., Abe, M., Fujikawa, A., Shigenobu, S., Futatsugi, A., Noda, M., Mikoshiba, K., et al. (2017) · eLife · doi:10.7554/elife.29677 · Cited by 73 · see citing works
The Role of Microglia in Perioperative Neuroinflammation and Neurocognitive Disorders
Saxena, S., Kruys, V., Vamecq, J., & Maze, M. (2021) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2021.671499 · Cited by 73 · see citing works
Dendritic mitoflash as a putative signal for stabilizing long-term synaptic plasticity
Fu, Z.-X., Tan, X., Fang, H., Lau, P.-M., Wang, X., Cheng, H., & Bi, G. (2017) · Nature Communications · doi:10.1038/s41467-017-00043-3 · Cited by 71 · see citing works
Phase separation as a mechanism for assembling dynamic postsynaptic density signalling complexes
Feng, Z., Chen, X., Zeng, M., & Zhang, M. (2018) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2018.12.001 · Cited by 68 · see citing works
Non-ionotropic NMDA receptor signaling gates bidirectional structural plasticity of dendritic spines
Stein, I. S., Park, D. K., Claiborne, N., & Zito, K. (2021) · Cell Reports · doi:10.1016/j.celrep.2020.108664 · Cited by 69 · see citing works
Stacho, M., & Manahan‐Vaughan, D. (2022) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2022.806356 · Cited by 70 · see citing works
Structural neural plasticity evoked by rapid-acting antidepressant interventions
Liao, C., Dua, A. N., Wojtasiewicz, C., Liston, C. M., & Kwan, A. C. (2024) · Nature reviews. Neuroscience · doi:10.1038/s41583-024-00876-0 · Cited by 77 · see citing works
Distinct synaptic plasticity rules operate across dendritic compartments in vivo during learning
Wright, W. J., Hedrick, N. G., & Komiyama, T. (2025) · Science · doi:10.1126/science.ads4706 · Cited by 69 · see citing works
Androuin, A., Potier, B., Nägerl, U. V., Cattaert, D., Danglot, L., Thierry, M., Youssef, I., Triller, A., Duyckaerts, C. J., Hachimi, K. H. E., et al. (2018) · Acta Neuropathologica · doi:10.1007/s00401-018-1847-6 · Cited by 59 · see citing works
Padmanabhan, P., Martínez‐Mármol, R., Xia, D., Götz, J., & Meunier, F. A. (2019) · eLife · doi:10.7554/elife.45040 · Cited by 61 · see citing works
Miyamoto, D., Marshall, W., Tononi, G., & Cirelli, C. (2021) · Nature Communications · doi:10.1038/s41467-021-23156-2 · Cited by 60 · see citing works
The Role of Rac GTPase in Dendritic Spine Morphogenesis and Memory
Costa, J. F., Dines, M., & Lamprecht, R. (2020) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2020.00012 · Cited by 55 · see citing works
Super-resolution microscopy: a closer look at synaptic dysfunction in Alzheimer disease
Padmanabhan, P., Kneynsberg, A., & Götz, J. (2021) · Nature reviews. Neuroscience · doi:10.1038/s41583-021-00531-y · Cited by 55 · see citing works
RGS14 Restricts Plasticity in Hippocampal CA2 by Limiting Postsynaptic Calcium Signaling
Evans, P. R., Parra-Bueno, P., Smirnov, M. S., Lustberg, D. J., Dudek, S. M., Hepler, J. R., & Yasuda, R. (2018) · eNeuro · doi:10.1523/eneuro.0353-17.2018 · Cited by 57 · see citing works
Self-citationControl of astrocyte morphology by Rho GTPases
Zeug, A., Müller, F. E., Anders, S., Herde, M. K., Minge, D., Ponimaskin, E. G., & Henneberger, C. (2017) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2017.05.003 · Cited by 56 · see citing works
Albarran, E., Raissi, A. J., Jáidar, O., Shatz, C. J., & Ding, J. (2021) · Neuron · doi:10.1016/j.neuron.2021.07.030 · Cited by 57 · see citing works
Functional Synaptic Architecture of Callosal Inputs in Mouse Primary Visual Cortex
Lee, K.-S., Vandemark, K., Mezey, D., Shultz, N., & Fitzpatrick, D. (2018) · Neuron · doi:10.1016/j.neuron.2018.12.005 · Cited by 53 · see citing works
Molecular mechanisms of synaptogenesis
Qi, C., Luo, L.-D., Feng, I., & Ma, S. (2022) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2022.939793 · Cited by 54 · see citing works
Fast calcium transients in dendritic spines driven by extreme statistics
Basnayake, K., Mazaud, D., Bemelmans, A., Rouach, N., Korkotian, E., & Holcman, D. (2019) · PLoS Biology · doi:10.1371/journal.pbio.2006202 · Cited by 51 · see citing works
Liu, Y., Zhang, T., Meng, D., Sun, L., Yang, G., He, Y., & Zhang, C. (2019) · Behavioural Brain Research · doi:10.1016/j.bbr.2019.112371 · Cited by 50 · see citing works
Exploring the Dendritic Spine Pathology in a Schizophrenia-related Neurodevelopmental Animal Model
Tendilla‐Beltrán, H., Vázquez‐Roque, R. A., Vázquez-Hernández, A. J., Garcés‐Ramírez, L., & Flores, G. (2018) · Neuroscience · doi:10.1016/j.neuroscience.2018.11.006 · Cited by 49 · see citing works
Kohtala, S., Alitalo, O., Rosenholm, M., Rozov, S. V., & Rantamäki, T. (2020) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2020.107741 · Cited by 46 · see citing works
Ampuero, E., Jury, N., Härtel, S., Marzolo, M., & van Zundert, B. (2016) · Journal of Cellular Physiology · doi:10.1002/jcp.25605 · Cited by 47 · see citing works
Barbati, S. A., Podda, M. V., & Grassi, C. (2022) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2022.945777 · Cited by 49 · see citing works
Translational control of auditory imprinting and structural plasticity by eIF2α
Batista, G., Johnson, J. L., Dominguez, E. N., Costa‐Mattioli, M., & Peña, J. L. (2016) · eLife · doi:10.7554/elife.17197 · Cited by 46 · see citing works
VAP spatially stabilizes dendritic mitochondria to locally support synaptic plasticity
Bapat, O., Purimetla, T., Krüssel, S., Shah, M., Fan, R., Thum, C., Rupprecht, F., Langer, J. D., & Rangaraju, V. (2024) · Nature Communications · doi:10.1038/s41467-023-44233-8 · Cited by 43 · see citing works
Shen, Z., Sun, D., Savastano, A., Varga, S. J., Cima‐Omori, M., Becker, S., Honigmann, A., & Zweckstetter, M. (2023) · Nature Communications · doi:10.1038/s41467-023-42295-2 · Cited by 46 · see citing works
Bossert, L. N., & Hagendorff, T. (2021) · Technology in Society · doi:10.1016/j.techsoc.2021.101678 · Cited by 44 · see citing works
Regulation of spine structural plasticity by Arc/Arg3.1
Newpher, T. M., Harris, S. C., Pringle, J., Hamilton, C., & Soderling, S. H. (2017) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2017.09.022 · Cited by 44 · see citing works
Retinoid X Receptor α Regulates DHA-Dependent Spinogenesis and Functional Synapse Formation In Vivo
Cao, H., Li, M.-Y., Li, G., Li, S.-J., Wen, B., Lü, Y., & Yu, X. (2020) · Cell Reports · doi:10.1016/j.celrep.2020.107649 · Cited by 43 · see citing works
Clustered structural and functional plasticity of dendritic spines
Lu, J., & Zuo, Y. (2016) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2016.09.008 · Cited by 42 · see citing works
A GPU-based computational framework that bridges neuron simulation and artificial intelligence
Zhang, Y., He, G., Ма, Л., Liu, X., Hjorth, J. J. J., Kozlov, A., He, Y., Zhang, S., Kotaleski, J. H., Tian, Y., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-41553-7 · Cited by 38 · see citing works
Dvorkin, R., & Ziv, N. E. (2016) · PLoS Biology · doi:10.1371/journal.pbio.1002572 · Cited by 38 · see citing works
Geometric principles of second messenger dynamics in dendritic spines
Cugno, A., Bartol, T. M., B, T. J. S. A., Iyengar, R., & Rangamani, P. (2019) · Scientific Reports · doi:10.1038/s41598-019-48028-0 · Cited by 38 · see citing works
Hiratani, N., & Fukai, T. (2017) · Journal of Neuroscience · doi:10.1523/jneurosci.0027-17.2017 · Cited by 35 · see citing works
Perez, J. D., Fusco, C. M., & Schuman, E. M. (2021) · Annual Review of Genetics · doi:10.1146/annurev-genet-030321-054851 · Cited by 36 · see citing works
Intramolecular domain dynamics regulate synaptic MAGUK protein interactions
Rademacher, N., Kuropka, B., Kunde, S., Wahl, M. C., Freund, C., & Shoichet, S. A. (2019) · eLife · doi:10.7554/elife.41299 · Cited by 34 · see citing works
Heterosynaptic cross-talk of pre- and postsynaptic strengths along segments of dendrites
Tong, R., Chater, T. E., Emptage, N. J., & Goda, Y. (2021) · Cell Reports · doi:10.1016/j.celrep.2021.108693 · Cited by 32 · see citing works
Rac1 is a downstream effector of PKCα in structural synaptic plasticity
Tu, X., Yasuda, R., & Colgan, L. A. (2020) · Scientific Reports · doi:10.1038/s41598-020-58610-6 · Cited by 31 · see citing works
Self-citationFakira, A. K., Massaly, N., Cohensedgh, O., Berman, A., & Morón, J. A. (2016) · Neuropsychopharmacology · doi:10.1038/npp.2016.69 · Cited by 34 · see citing works
The fate of hippocampal synapses depends on the sequence of plasticity-inducing events
Wiegert, J. S., Pulin, M., Gee, C. E., & Oertner, T. G. (2018) · eLife · doi:10.7554/elife.39151 · Cited by 32 · see citing works
Relationship Between Synaptic AMPAR and Spine Dynamics: Impairments in the FXS Mouse
Suresh, A., & Dunaevsky, A. (2017) · Cerebral Cortex · doi:10.1093/cercor/bhx128 · Cited by 31 · see citing works
Li, N., Li, C., Han, R., Wang, Y., Yang, M., Wang, H., & Tian, J. (2019) · Frontiers in Pharmacology · doi:10.3389/fphar.2019.00053 · Cited by 32 · see citing works
β-adrenergic signaling broadly contributes to LTP induction
Jędrzejewska‐Szmek, J., Luczak, V., Abel, T. G., & Blackwell, K. T. (2017) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1005657 · Cited by 30 · see citing works
Kucharz, K., & Lauritzen, M. (2018) · Brain · doi:10.1093/brain/awy036 · Cited by 30 · see citing works
Sancho, L., & Bloodgood, B. L. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.07.070 · Cited by 30 · see citing works
The elongation factor eEF1A2 controls translation and actin dynamics in dendritic spines
Mendoza, M. B., Gutierrez, S., Ortiz, R., Moreno, D. F., Dermit, M., Dodel, M., Rebollo, E., Bosch, M., Mardakheh, F. K., & Gallego, C. (2021) · Science Signaling · doi:10.1126/scisignal.abf5594 · Cited by 29 · see citing works
Plasticity of postsynaptic nanostructure
Droogers, W. J., & MacGillavry, H. D. (2023) · Molecular and Cellular Neuroscience · doi:10.1016/j.mcn.2023.103819 · Cited by 27 · see citing works
Leem, Y., Yoon, S. S., & Jo, S. A. (2020) · Biomolecules & Therapeutics · doi:10.4062/biomolther.2019.152 · Cited by 27 · see citing works
Imaging dendritic spines: molecular organization and signaling for plasticity
Suratkal, S. S., Yen, Y., & Nishiyama, J. (2020) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2020.08.006 · Cited by 29 · see citing works
Self-citationCurrent challenges and solutions of super-resolution structured illumination microscopy
Zheng, X., Zhou, J., Wang, L., Wang, M., Wu, W., Chen, J., Qu, J., Gao, B. Z., & Shao, Y. (2021) · APL Photonics · doi:10.1063/5.0038065 · Cited by 27 · see citing works
Rosado, J., Bui, V. D., Haas, C. A., Beck, J., Queisser, G., & Vlachos, A. (2022) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1010069 · Cited by 27 · see citing works
The Role of Actin Cytoskeleton in Memory Formation in Amygdala
Lamprecht, R. (2016) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2016.00023 · Cited by 28 · see citing works
Dittmer, P. J., Dell’Acqua, M. L., & Sather, W. A. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1902461116 · Cited by 27 · see citing works
Ali, F., Shao, L.-X., Gerhard, D. M., Sweasy, K., Pothula, S., Pittenger, C., Duman, R. S., & Kwan, A. C. (2020) · Molecular Psychiatry · doi:10.1038/s41380-020-0708-6 · Cited by 24 · see citing works
Cooperative stochastic binding and unbinding explain synaptic size dynamics and statistics
Shomar, A., Geyrhofer, L., Ziv, N. E., & Brenner, N. (2017) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1005668 · Cited by 25 · see citing works
IRSp53 promotes postsynaptic density formation and actin filament bundling
Feng, Z., Lee, S., Jia, B., Jian, T., Kim, E., & Zhang, M. (2022) · The Journal of Cell Biology · doi:10.1083/jcb.202105035 · Cited by 25 · see citing works
AMPA receptor trafficking and its role in heterosynaptic plasticity
Antunes, G., & Simões-de-Souza, F. M. (2018) · Scientific Reports · doi:10.1038/s41598-018-28581-w · Cited by 26 · see citing works
Lim, C., Kang, X., Mirabella, V. R., Zhang, H., Bu, Q., Araki, Y., Hoang, E. T., Wang, S., Shen, Y., Choi, S., et al. (2017) · Genes & Development · doi:10.1101/gad.294413.116 · Cited by 25 · see citing works
Genetically encoded biosensor for fluorescence lifetime imaging of PTEN dynamics in the intact brain
Kagan, T., Gabay, M., Meenakshisundaram, A., Levi, Y., Eid, S., Malchenko, N., Maman, M., Nitzan, A., Ravotto, L., Zaidel‐Bar, R., et al. (2025) · Nature Methods · doi:10.1038/s41592-025-02610-9 · Cited by 25 · see citing works
- Authors
- Nishiyama, J., & Yasuda, R.
- Affiliations
- Max Planck Florida Institute for Neuroscience (US)
- Corresponding author
- Yasuda, Ryohei
- Venue
- Neuron
- Publisher
- Elsevier BV
- Published
- 2015-07
- Volume
- 87
- Issue
- 1
- Pages
- 63-75
- ISSN
- 0896-6273 (ISSN-L)
- PMC
- PMC4722820
- OpenAlex
- W1597375909
- Cited by
- 199
- References
- 154
- Citations by year
- 2026: 5 · 2025: 15 · 2024: 15 · 2023: 10 · 2022: 21 · 2021: 21 · 2020: 23 · 2019: 20 · 2018: 25 · 2017: 23 · 2016: 19 · 2015: 2
- FWCI
- 2.73
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Neuron (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Funders
- National Institute of Mental Health (R01MH064748, R01MH080047, R01MH095090)
- National Institute of Neurological Disorders and Stroke (R01NS068410)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Neuroscience › Cognitive Neuroscience › Memory and Neural Mechanisms
- Life Sciences › Neuroscience › Cognitive Neuroscience › Neural dynamics and brain function
- Keywords
- dendritic spines, synaptic plasticity, biochemical signaling, spatiotemporal control, dendritic morphology, learning and memory, signaling networks
- MeSH terms
- Dendrites, Humans, Learning, Neuronal Plasticity, Signal Transduction, Long-Term Potentiation, Dendritic Spines
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review