The neocortical circuit: themes and variations
Open accessAbstract
Similarities in neocortical circuit organization across areas and species suggest a common strategy to process diverse types of information, including sensation from diverse modalities, motor control and higher cognitive processes. Cortical neurons belong to a small number of main classes. The properties of these classes, including their local and long-range connectivity, developmental history, gene expression, intrinsic physiology and in vivo activity patterns, are remarkably similar across areas. Each class contains subclasses; for a rapidly growing number of these, conserved patterns of input and output connections are also becoming evident. The ensemble of circuit connections constitutes a basic circuit pattern that appears to be repeated across neocortical areas, with area- and species-specific modifications. Such 'serially homologous' organization may adapt individual neocortical regions to the type of information each must process.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The brain exhibits extreme anatomical specialization with distinct cell types, circuit motifs, and processing principles across regions.
“The brain exhibits extreme anatomical specialization with distinct cell types, circuit motifs, and processing principles across regions—from the unique neuronal types of the cerebellum to the columnar organization of sensory cortices to the distinct microcircuits of the basal ganglia (Harris and Shepherd 2015; Nelken 2004).”
From The myth of the Bayesian brain (2025) · cites this paper as Harris and Shepherd 2015
The Abstract and Introduction describe area-specific modifications and functional specialization within the neocortex. But they emphasize shared cell classes and a common circuit pattern across cortical areas, rather than extreme anatomical specialization or distinct processing principles. The cited passages do not establish the sentence’s examples concerning the cerebellum or basal ganglia (page numbers unavailable). (LLM, conf=0.86)
Experimental — accuracy not yet measuredLayer marker distributions within AARs agreed with known biology of cortical layers.
“we found that layer marker distributions within our AARs agreed with the biology described in the literature,11,48”
From Uncovering the signatures of aging and senescence in the human dorsolateral prefrontal cortex (2026) · cites this paper as [48]
Cortical neurons exhibit extreme diversity in gene expression as well as in morphological and electrophysiological properties.
“Cortical neurons exhibit extreme diversity in gene expression as well as in morphological and electrophysiological properties1,2.”
From Phenotypic variation of transcriptomic cell types in mouse motor cortex (2021) · cites this paper as [1]
Glutamatergic neuronal types are organized by layers and their long-range projection patterns.
“Glutamatergic neuronal types are organized by layers and their long-range projection patterns”
From A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation (2021) · cites this paper as Harris and Shepherd, 2015
L4 IT CTX Rspo1 likely represents L4 spiny stellate or star pyramid neurons that are morphologically distinct from pyramidal neurons in other layers.
“This supertype likely represents the L4 spiny stellate or star pyramid neurons that are morphologically distinct from the pyramidal neurons in other layers (Harris and Shepherd, 2015)”
From A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation (2021) · cites this paper as Harris and Shepherd, 2015
Layer 4 (L4) of mammalian neocortex is the main direct target of sensory inputs from the thalamus and acts as the first level of cortical processing for sensory signals.
“In this stereotypical architecture, layer 4 (L4) is the main direct target of sensory inputs coming from the thalamus, thus acting as the first level of cortical processing for sensory signals1.”
From Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas (2019) · cites this paper as [1]
In the mammalian cerebral cortex, GABAergic interneurons regulate the balance and dynamic organization of pyramidal neuron ensembles, which mediate information processing streams and output channels.
“In the mammalian cerebral cortex, GABAergic interneurons regulate the balance and dynamic organization of pyramidal neuron ensembles3, which in turn mediate myriad information processing streams and output channels4,5.”
From The diversity of GABAergic neurons and neural communication elements (2019) · cites this paper as [4]
Earlier studies identified three main interneuron groups in neocortex-Pvalb+, Sst+, and Htr3a+-each containing distinct types.
“leading to the characterization of three major populations (i.e., Pvalb+, Sst+, and Htr3a+) of neocortical interneurons, each with distinct types”
From Classification of electrophysiological and morphological neuron types in the mouse visual cortex (2019) · cites this paper as [3]
Earlier work described excitatory neuron groups whose properties are often tied to cortical layer and axonal projection targets.
“excitatory neuron populations with features often linked to their laminar locations as well as the locations to which they project their axons2–4”
From Classification of electrophysiological and morphological neuron types in the mouse visual cortex (2019) · cites this paper as [3]
PCs can be segregated into distinct subtypes based on the projection target of their long-range axons.
“Importantly, PCs can be segregated into distinct subtypes based on the projection target of their long-range axons (313, 432, 466), and recent work suggests this informs connectivity rules with local interneurons (607).”
From Hippocampal GABAergic Inhibitory Interneurons (2017) · cites this paper as [466]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Cellular Scaling Rules for the Brains of Marsupials: Not as “Primitive” as Expected
Santos, S. E. D., Porfírio, J., Cunha, F., Manger, P. R., Tavares, W. C., Pessôa, L. M., Raghanti, M. A., Sherwood, C. C., & Herculano‐Houzel, S. (2017) · Brain Behavior and Evolution · doi:10.1159/000452856 · Cited by 2,651 · see citing works
A mesoscale connectome of the mouse brain
Oh, S. W., Harris, J. A., Ng, L., Winslow, B., Cain, N., Mihalas, S., Wang, Q., Lau, C., Kuan, L., Henry, A. M., et al. (2014) · Nature · doi:10.1038/nature13186 · Cited by 2,612 · see citing works
Neuronal Diversity and Temporal Dynamics: The Unity of Hippocampal Circuit Operations
Klausberger, T., & Somogyi, P. (2008) · Science · doi:10.1126/science.1149381 · Cited by 2,050 · see citing works
NEURONAL CIRCUITS OF THE NEOCORTEX
Douglas, R. J., & Martin, K. A. C. (2004) · Annual Review of Neuroscience · doi:10.1146/annurev.neuro.27.070203.144152 · Cited by 1,886 · see citing works
A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex
Taniguchi, H., He, M., Wu, P., Kim, S., Paik, R., Sugino, K., Kvitsani, D., Fu, Y., Lu, J., Lin, Y., et al. (2011) · Neuron · doi:10.1016/j.neuron.2011.07.026 · Cited by 1,828 · see citing works
Modulation of visual responses by behavioral state in mouse visual cortex
Niell, C. M., & Stryker, M. P. (2010) · Neuron · doi:10.1016/j.neuron.2010.01.033 · Cited by 1,483 · see citing works
Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons
Rudy, B., Fishell, G., Lee, S., & Hjerling‐Leffler, J. (2011) · Developmental Neurobiology · doi:10.1002/dneu.20853 · Cited by 1,420 · see citing works
Balanced inhibition underlies tuning and sharpens spike timing in auditory cortex
Wehr, M., & Zador, A. M. (2003) · Nature · doi:10.1038/nature02116 · Cited by 1,363 · see citing works
Pfeffer, C. K., Xue, M., He, M., Huang, Z. J., & Scanziani, M. (2013) · Nature Neuroscience · doi:10.1038/nn.3446 · Cited by 1,353 · see citing works
Cortex: Statistics and Geometry of Neuronal Connectivity
Braitenberg, V., & Schüz, A. (1998) · doi:10.1007/978-3-662-03733-1 · Cited by 1,178 · see citing works
Cortical interneurons that specialize in disinhibitory control
Pi, H.-J., Hangya, B., Kvitsiani, D., Sanders, J. I., Huang, Z. J., & Kepecs, A. (2013) · Nature · doi:10.1038/nature12676 · Cited by 1,136 · see citing works
Interneuron cell types are fit to function
Kepecs, A., & Fishell, G. (2014) · Nature · doi:10.1038/nature12983 · Cited by 1,110 · see citing works
Highly selective receptive fields in mouse visual cortex
Niell, C. M., & Stryker, M. P. (2008) · The Journal of Neuroscience · doi:10.1523/jneurosci.0623-08.2008 · Cited by 1,081 · see citing works
Laminar origins and terminations of cortical connections of the occipital lobe in the rhesus monkey
Rockland, K. S., & Pandya, D. Ν. (1979) · Brain Research · doi:10.1016/0006-8993(79)90485-2 · Cited by 1,076 · see citing works
The subcellular organization of neocortical excitatory connections
Petreanu, L., Mao, T., Sternson, S. M., & Svoboda, K. (2009) · Nature · doi:10.1038/nature07709 · Cited by 1,047 · see citing works
A Cortical Circuit for Gain Control by Behavioral State
Fu, Y., Tucciarone, J. M., Espinosa, J. S., Sheng, N., Darcy, D. P., Nicoll, R. A., Huang, Z. J., & Stryker, M. P. (2014) · Cell · doi:10.1016/j.cell.2014.01.050 · Cited by 937 · see citing works
Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections
Petreanu, L., Huber, D., Sobczyk, A., & Svoboda, K. (2007) · Nature Neuroscience · doi:10.1038/nn1891 · Cited by 930 · see citing works
The excitatory neuronal network of the C2 barrel column in mouse primary somatosensory cortex
Lefort, S., Tomm, C., Floyd Sarria, J.-C., & Petersen, C. C. H. (2009) · Neuron · doi:10.1016/j.neuron.2008.12.020 · Cited by 875 · see citing works
Molecular logic of neocortical projection neuron specification, development and diversity
Greig, L. C., Woodworth, M. B., Galazo, M. J., Padmanabhan, H., & Macklis, J. D. (2013) · Nature Reviews Neuroscience · doi:10.1038/nrn3586 · Cited by 863 · see citing works
Functional specificity of local synaptic connections in neocortical networks
Ko, H., Hofer, S. B., Pichler, B., Buchanan, K. A., Sjöström, P. J., & Mrsic‐Flogel, T. D. (2011) · Nature · doi:10.1038/nature09880 · Cited by 861 · see citing works
New insights into the classification and nomenclature of cortical GABAergic interneurons
DeFelipe, J., López-Cruz, P. L., Benavides-Piccione, R., Bielza, C., Larrañaga, P., Anderson, S., Burkhalter, A., Cauli, B., Fairén, A., Feldmeyer, D., et al. (2013) · Nature Reviews Neuroscience · doi:10.1038/nrn3444 · Cited by 833 · see citing works
Self-citationCorticostriatal connectivity and its role in disease
Shepherd, G. M. G. (2013) · Nature Reviews Neuroscience · doi:10.1038/nrn3469 · Cited by 824 · see citing works
Self-citationLong-range and local circuits for top-down modulation of visual cortex processing
Zhang, S., Xu, M., Kamigaki, T., Hoang Do, J. P., Chang, W.-C., Jenvay, S., Miyamichi, K., Luo, L., & Dan, Y. (2014) · Science · doi:10.1126/science.1254126 · Cited by 804 · see citing works
Parallel processing strategies of the primate visual system
Nassi, J. J., & Callaway, E. M. (2009) · Nature Reviews Neuroscience · doi:10.1038/nrn2619 · Cited by 802 · see citing works
Neural Networks of the Mouse Neocortex
Zingg, B., Hintiryan, H., Gou, L., Song, M. Y., Bay, M., Bienkowski, M. S., Foster, N. N., Yamashita, S., Bowman, I., Toga, A. W., et al. (2014) · Cell · doi:10.1016/j.cell.2014.02.023 · Cited by 797 · see citing works
A disinhibitory circuit mediates motor integration in the somatosensory cortex
Lee, S., Kruglikov, I., Huang, Z. J., Fishell, G., & Rudy, B. (2013) · Nature Neuroscience · doi:10.1038/nn.3544 · Cited by 758 · see citing works
Specificity of monosynaptic connections from thalamus to visual cortex
Reid, R. C., & Alonso, J. (1995) · Nature · doi:10.1038/378281a0 · Cited by 732 · see citing works
The thalamic matrix and thalamocortical synchrony
Jones, E. G. (2001) · Trends in Neurosciences · doi:10.1016/s0166-2236(00)01922-6 · Cited by 688 · see citing works
Visual Response Properties of Striate Cortical Neurons Projecting to Area MT in Macaque Monkeys
Movshon, J. A., & Newsome, W. T. (1996) · The Journal of Neuroscience · doi:10.1523/jneurosci.16-23-07733.1996 · Cited by 651 · see citing works
Gerfen, C. R., Paletzki, R., & Heintz, N. (2013) · Neuron · doi:10.1016/j.neuron.2013.10.016 · Cited by 647 · see citing works
Cortical connectivity and sensory coding
Harris, K. D., & Mrsic‐Flogel, T. D. (2013) · Nature · doi:10.1038/nature12654 · Cited by 642 · see citing works
Self-citationThalamic Relay Functions and Their Role in Corticocortical Communication
Guillery, R. W., & Sherman, S. M. (2002) · Neuron · doi:10.1016/s0896-6273(01)00582-7 · Cited by 637 · see citing works
Cellular mechanisms of brain state-dependent gain modulation in visual cortex
Polack, P.-O., Friedman, J., & Golshani, P. (2013) · Nature Neuroscience · doi:10.1038/nn.3464 · Cited by 628 · see citing works
Cortical high-density counterstream architectures
Markov, N. T., Ercsey-Ravasz, M., Van Essen, D. C., Knoblauch, K., Toroczkai, Z., & Kennedy, H. (2013) · Science · doi:10.1126/science.1238406 · Cited by 616 · see citing works
Map Plasticity in Somatosensory Cortex
Feldman, D. E., & Brecht, M. (2005) · Science · doi:10.1126/science.1115807 · Cited by 587 · see citing works
A synaptic and circuit basis for corollary discharge in the auditory cortex
Schneider, D. M., Nelson, A., & Mooney, R. (2014) · Nature · doi:10.1038/nature13724 · Cited by 580 · see citing works
Laminar Structure of Spontaneous and Sensory-Evoked Population Activity in Auditory Cortex
Sakata, S., & Harris, K. D. (2009) · Neuron · doi:10.1016/j.neuron.2009.09.020 · Cited by 580 · see citing works
Self-citationLaminar organization of thalamic projections to the rat neocortex.
Herkenham, M. (1980) · Science · doi:10.1126/science.7352263 · Cited by 579 · see citing works
Area Patterning of the Mammalian Cortex
O’Leary, D. D. M., Chou, S., & Sahara, S. (2007) · Neuron · doi:10.1016/j.neuron.2007.10.010 · Cited by 574 · see citing works
Sparse Representation of Sounds in the Unanesthetized Auditory Cortex
Hromádka, T., DeWeese, M. R., & Zador, A. M. (2008) · PLoS Biology · doi:10.1371/journal.pbio.0060016 · Cited by 572 · see citing works
Synaptic basis for intense thalamocortical activation of feedforward inhibitory cells in neocortex
Cruikshank, S. J., Lewis, T. J., & Connors, B. W. (2007) · Nature Neuroscience · doi:10.1038/nn1861 · Cited by 558 · see citing works
Nonlinear dendritic integration of sensory and motor input during an active sensing task
Xu, N.-L., Harnett, M. T., Williams, S. R., Huber, D., O’Connor, D. H., Svoboda, K., & Magee, J. C. (2012) · Nature · doi:10.1038/nature11601 · Cited by 548 · see citing works
Gain control by layer six in cortical circuits of vision
Olsen, S. R., Bortone, D. S., Adesnik, H., & Scanziani, M. (2012) · Nature · doi:10.1038/nature10835 · Cited by 539 · see citing works
Cortical Evolution: Judge the Brain by Its Cover
Geschwind, D. H., & Rakic, P. (2013) · Neuron · doi:10.1016/j.neuron.2013.10.045 · Cited by 519 · see citing works
Long-Range Neuronal Circuits Underlying the Interaction between Sensory and Motor Cortex
Mao, T., Kusefoglu, D., Hooks, B. M., Huber, D., Petreanu, L., & Svoboda, K. (2011) · Neuron · doi:10.1016/j.neuron.2011.07.029 · Cited by 514 · see citing works
A canonical microcircuit for neocortex
Douglas, R. J., Martin, K. A. C., & Whitteridge, D. (1989) · Neural Computation · doi:10.1162/neco.1989.1.4.480 · Cited by 514 · see citing works
Deep Cortical Layers Are Activated Directly by Thalamus
Constantinople, C. M., & Bruno, R. M. (2013) · Science · doi:10.1126/science.1236425 · Cited by 484 · see citing works
Cruikshank, S. J., Urabe, H., Nurmikko, A. V., & Connors, B. W. (2010) · Neuron · doi:10.1016/j.neuron.2009.12.025 · Cited by 459 · see citing works
Neural Activity in Barrel Cortex Underlying Vibrissa-Based Object Localization in Mice
O’Connor, D. H., Peron, S., Huber, D., & Svoboda, K. (2010) · Neuron · doi:10.1016/j.neuron.2010.08.026 · Cited by 453 · see citing works
The subplate and early cortical circuits
Kanold, P. O., & Luhmann, H. J. (2010) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-060909-153244 · Cited by 440 · see citing works
Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex
Gentet, L. J., Kremer, Y., Taniguchi, H., Huang, Z. J., Staiger, J. F., & Petersen, C. C. H. (2012) · Nature Neuroscience · doi:10.1038/nn.3051 · Cited by 438 · see citing works
Functional maps of neocortical local circuitry.
Thomson, A. M. (2007) · Frontiers in Neuroscience · doi:10.3389/neuro.01.1.1.002.2007 · Cited by 434 · see citing works
Integration of visual motion and locomotion in mouse visual cortex
Saleem, A. B., Ayaz, A., Jeffery, K. J., Harris, K. D., & Carandini, M. (2013) · Nature Neuroscience · doi:10.1038/nn.3567 · Cited by 402 · see citing works
Self-citationThe organization of corticothalamic projections: reciprocity versus parity
Deschênes, M., Veinante, P., & Zhang, Z. (1998) · Brain Research Reviews · doi:10.1016/s0165-0173(98)00017-4 · Cited by 371 · see citing works
The corticothalamocortical circuit drives higher-order cortex in the mouse
Theyel, B. B., Llano, D. A., & Sherman, S. M. (2010) · Nature Neuroscience · doi:10.1038/nn.2449 · Cited by 366 · see citing works
Neocortical Somatostatin-Expressing GABAergic Interneurons Disinhibit the Thalamorecipient Layer 4
Xu, H., Jeong, H.-Y., Tremblay, R., & Rudy, B. (2013) · Neuron · doi:10.1016/j.neuron.2012.11.004 · Cited by 366 · see citing works
Intracortical circuits of pyramidal neurons reflect their long-range axonal targets
Brown, S. P., & Hestrin, S. (2009) · Nature · doi:10.1038/nature07658 · Cited by 357 · see citing works
Lateral competition for cortical space by layer-specific horizontal circuits
Adesnik, H., & Scanziani, M. (2010) · Nature · doi:10.1038/nature08935 · Cited by 356 · see citing works
de Kock, C. P. J., Bruno, R. M., Spors, H., & Sakmann, B. J. (2007) · The Journal of Physiology · doi:10.1113/jphysiol.2006.124321 · Cited by 344 · see citing works
Development and critical period plasticity of the barrel cortex
Erzurumlu, R. S., & Gaspar, P. (2012) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2012.08075.x · Cited by 344 · see citing works
Organization of Cortical and Thalamic Input to Pyramidal Neurons in Mouse Motor Cortex
Hooks, B. M., Mao, T., Gutnisky, D. A., Yamawaki, N., Svoboda, K., & Shepherd, G. M. (2013) · Journal of Neuroscience · doi:10.1523/jneurosci.4338-12.2013 · Cited by 343 · see citing works
Self-citationThe organization of two new cortical interneuronal circuits
Jiang, X., Wang, G., Lee, A. J., Stornetta, R. L., & Zhu, J. J. (2013) · Nature Neuroscience · doi:10.1038/nn.3305 · Cited by 338 · see citing works
Behaviour-dependent recruitment of long-range projection neurons in somatosensory cortex
Chen, J. L., Carta, S., Soldado-Magraner, J., Schneider, B. L., & Helmchen, F. (2013) · Nature · doi:10.1038/nature12236 · Cited by 334 · see citing works
Top-down laminar organization of the excitatory network in motor cortex
Weiler, N., Wood, L., Yu, J., Solla, S. A., & Shepherd, G. M. G. (2008) · Nature Neuroscience · doi:10.1038/nn2049 · Cited by 330 · see citing works
Self-citationScaling down of balanced excitation and inhibition by active behavioral states in auditory cortex
Zhou, M., Liang, F., Xiong, X. R., Li, L., Li, H., Xiao, Z., Tao, H. W., & Zhang, L. I. (2014) · Nature Neuroscience · doi:10.1038/nn.3701 · Cited by 316 · see citing works
A dedicated circuit links direction-selective retinal ganglion cells to the primary visual cortex
Cruz‐Martín, A., El-Danaf, R. N., Osakada, F., Sriram, B., Dhande, O. S., Nguyen, P. L., Callaway, E. M., Ghosh, A., & Huberman, A. D. (2014) · Nature · doi:10.1038/nature12989 · Cited by 312 · see citing works
Oberlaender, M., de Kock, C. P. J., Bruno, R. M., Ramirez, A., Meyer, H. S., Dercksen, V. J., Helmstaedter, M. N., & Sakmann, B. J. (2011) · Cerebral Cortex · doi:10.1093/cercor/bhr317 · Cited by 304 · see citing works
Translaminar inhibitory cells recruited by layer 6 corticothalamic neurons suppress visual cortex
Bortone, D. S., Olsen, S. R., & Scanziani, M. (2014) · Neuron · doi:10.1016/j.neuron.2014.02.021 · Cited by 300 · see citing works
Excitatory neuronal connectivity in the barrel cortex
Feldmeyer, D. (2012) · Frontiers in Neuroanatomy · doi:10.3389/fnana.2012.00024 · Cited by 298 · see citing works
Subthreshold mechanisms underlying state-dependent modulation of visual responses
Bennett, C., Arroyo, S., & Hestrin, S. (2013) · Neuron · doi:10.1016/j.neuron.2013.08.007 · Cited by 292 · see citing works
Laminar Comparison of Somatosensory Cortical Plasticity
Diamond, M. E., Huang, W. M., & Ebner, F. F. (1994) · Science · doi:10.1126/science.8091215 · Cited by 289 · see citing works
Dynamics of excitation and inhibition underlying stimulus selectivity in rat somatosensory cortex
Wilent, W. B., & Contreras, D. (2005) · Nature Neuroscience · doi:10.1038/nn1545 · Cited by 288 · see citing works
Zhang, Z., & Deschênes, M. (1997) · Journal of Neuroscience · doi:10.1523/jneurosci.17-16-06365.1997 · Cited by 279 · see citing works
Cell-type homologies and the origins of the neocortex
Dugas-Ford, J., Rowell, J. J., & Ragsdale, C. W. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1204773109 · Cited by 278 · see citing works
Kita, T., & Kita, H. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.5717-11.2012 · Cited by 276 · see citing works
Recurrent Connection Patterns of Corticostriatal Pyramidal Cells in Frontal Cortex
Morishima, M., & Kawaguchi, Y. (2006) · Journal of Neuroscience · doi:10.1523/jneurosci.0252-06.2006 · Cited by 273 · see citing works
Corticospinal Neurones. Their Role in Movement
Gilman, S. (1979) · Neurology · doi:10.1212/wnl.29.6.915-b · Cited by 273 · see citing works
Thomson (2010) · Frontiers in Neuroanatomy · doi:10.3389/fnana.2010.00013 · Cited by 269 · see citing works
Dimensions of a projection column and architecture of VPM and POm axons in rat vibrissal cortex
Wimmer, V. C., Bruno, R. M., de Kock, C. P. J., Kuner, T., & Sakmann, B. (2010) · Cerebral Cortex · doi:10.1093/cercor/bhq068 · Cited by 263 · see citing works
Sublayer-specific microcircuits of corticospinal and corticostriatal neurons in motor cortex
Anderson, C. T., Sheets, P. L., Kiritani, T., & Shepherd, G. M. (2010) · Nature Neuroscience · doi:10.1038/nn.2538 · Cited by 261 · see citing works
Self-citationHierarchical organization of areas in rat visual cortex
Coogan, T. A., & Burkhalter, A. (1993) · Journal of Neuroscience · doi:10.1523/jneurosci.13-09-03749.1993 · Cited by 260 · see citing works
Geometric and functional organization of cortical circuits
Shepherd, G. M., Stepanyants, A., Bureau, I., Chklovskii, D. B., & Svoboda, K. (2005) · Nature Neuroscience · doi:10.1038/nn1447 · Cited by 257 · see citing works
Self-citationShepherd, G. M. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.1173-05.2005 · Cited by 236 · see citing works
Self-citationStaiger, J. F. (2004) · Cerebral Cortex · doi:10.1093/cercor/bhh029 · Cited by 226 · see citing works
Fitzpatrick, D. (1996) · Cerebral Cortex · doi:10.1093/cercor/6.3.329 · Cited by 225 · see citing works
Laminar Analysis of Excitatory Local Circuits in Vibrissal Motor and Sensory Cortical Areas
Hooks, B. M., Hires, S. A., Zhang, Y.-X., Huber, D., Petreanu, L., Svoboda, K., & Shepherd, G. M. (2011) · PLoS Biology · doi:10.1371/journal.pbio.1000572 · Cited by 214 · see citing works
Self-citationA circuit for motor cortical modulation of auditory cortical activity
Nelson, A., Schneider, D. M., Takatoh, J., Sakurai, K., Wang, F., & Mooney, R. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.2275-13.2013 · Cited by 213 · see citing works
Thalamic control of layer 1 circuits in prefrontal cortex
Cruikshank, S. J., Ahmed, O. J., Stevens, T. R., Patrick, S. L., Gonzalez, A. N., Elmaleh, M., & Connors, B. W. (2012) · The Journal of Neuroscience · doi:10.1523/jneurosci.3231-12.2012 · Cited by 212 · see citing works
The fractions of short- and long-range connections in the visual cortex
Stepanyants, A., Martinez, L. M., Ferecskó, A. S., & Kisvárday, Z. F. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0810390106 · Cited by 208 · see citing works
Swadlow, H. A. (1989) · Journal of Neurophysiology · doi:10.1152/jn.1989.62.1.288 · Cited by 208 · see citing works
Cell Type-Specific Circuits of Cortical Layer IV Spiny Neurons
Schubert, D., Kötter, R., Zilles, K., Luhmann, H. J., & Staiger, J. F. (2003) · The Journal of Neuroscience · doi:10.1523/jneurosci.23-07-02961.2003 · Cited by 207 · see citing works
The importance of being hierarchical
Markov, N. T., & Kennedy, H. (2013) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2012.12.008 · Cited by 204 · see citing works
Unveiling the diversity of thalamocortical neuron subtypes
Clascá, F., Rubio‐Garrido, P., & Jabaudon, D. (2012) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2012.08033.x · Cited by 196 · see citing works
In vivo reprogramming of circuit connectivity in postmitotic neocortical neurons
la Rossa, A. D., Bellone, C., Golding, B., Vitali, I., Moss, J., Toni, N., Lüscher, C., & Jabaudon, D. (2013) · Nature Neuroscience · doi:10.1038/nn.3299 · Cited by 188 · see citing works
The neuronal composition of area 17 of rat visual cortex. II. The nonpyramidal cells
Peters, A., & Kara, D. A. (1985) · The Journal of Comparative Neurology · doi:10.1002/cne.902340209 · Cited by 185 · see citing works
Vélez‐Fort, M., Rousseau, C. V., Niedworok, C. J., Wickersham, I. R., Rancz, E. A., Brown, A. P. Y., Strom, M., & Margrie, T. W. (2014) · Neuron · doi:10.1016/j.neuron.2014.08.001 · Cited by 184 · see citing works
Kiritani, T., Wickersham, I. R., Seung, H. S., & Shepherd, G. M. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.4759-11.2012 · Cited by 184 · see citing works
Self-citationPhase-to-rate transformations encode touch in cortical neurons of a scanning sensorimotor system
Curtis, J., & Kleinfeld, D. (2009) · Nature Neuroscience · doi:10.1038/nn.2283 · Cited by 181 · see citing works
Membrane Potential Dynamics of Neocortical Projection Neurons Driving Target-Specific Signals
Yamashita, T., Pala, A., Pedrido, L., Kremer, Y., Welker, E., & Petersen, C. C. H. (2013) · Neuron · doi:10.1016/j.neuron.2013.10.059 · Cited by 172 · see citing works
Layer 6 Corticothalamic Neurons Activate a Cortical Output Layer, Layer 5a
Kim, J., Matney, C. J., Blankenship, A. G., Hestrin, S., & Brown, S. P. (2014) · Journal of Neuroscience · doi:10.1523/jneurosci.1325-14.2014 · Cited by 169 · see citing works
Precise Development of Functional and Anatomical Columns in the Neocortex
Bureau, I., Shepherd, G. M., & Svoboda, K. (2004) · Neuron · doi:10.1016/j.neuron.2004.05.002 · Cited by 149 · see citing works
Self-citationCorrelated Variability in Laminar Cortical Circuits
Hansen, B. J., Chelaru, M. I., & Dragoi, V. (2012) · Neuron · doi:10.1016/j.neuron.2012.08.029 · Cited by 146 · see citing works
Geniculocortical Input Drives Genetic Distinctions Between Primary and Higher-Order Visual Areas
Chou, S., Babot, Z., Leingärtner, A., Studer, M., Nakagawa, Y., & O’Leary, D. D. M. (2013) · Science · doi:10.1126/science.1232806 · Cited by 144 · see citing works
The neuronal composition of area 17 of rat visual cortex. I. The pyramidal cells
Peters, A., & Kara, D. A. (1985) · Journal of Comparative Neurology · doi:10.1002/cne.902340208 · Cited by 144 · see citing works
Modality-specific thalamocortical inputs instruct the identity of postsynaptic L4 neurons
Pouchelon, G., Gambino, F., Bellone, C., Telley, L., Vitali, I., Lüscher, C., Holtmaat, A. J. D. G., & Jabaudon, D. (2014) · Nature · doi:10.1038/nature13390 · Cited by 143 · see citing works
Hutsler, J. J., Lee, D. G., & Porter, K. K. (2005) · Brain Research · doi:10.1016/j.brainres.2005.06.015 · Cited by 137 · see citing works
Parent, M., & Parent, A. (2004) · The Journal of Comparative Neurology · doi:10.1002/cne.20348 · Cited by 136 · see citing works
Single‐cell study of motor cortex projections to the barrel field in rats
Veinante, P., & Deschênes, M. (2003) · The Journal of comparative neurology · doi:10.1002/cne.10769 · Cited by 134 · see citing works
Subcircuit-specific neuromodulation in the prefrontal cortex
Dembrow, N. C., & Johnston, D. (2014) · Frontiers in Neural Circuits · doi:10.3389/fncir.2014.00054 · Cited by 133 · see citing works
Auditory thalamic nuclei projections to the temporal cortex in the rat
Kimura, A., Donishi, T., Sakoda, T., Hazama, M., & Tamai, Y. (2003) · Neuroscience · doi:10.1016/s0306-4522(02)00949-1 · Cited by 131 · see citing works
Laminar dependence of neuronal correlations in visual cortex
Smith, M. A., Jia, X., Zandvakili, A., & Kohn, A. (2013) · Journal of Neurophysiology · doi:10.1152/jn.00846.2012 · Cited by 129 · see citing works
Smith, P. H., & Populin, L. C. (2001) · The Journal of Comparative Neurology · doi:10.1002/cne.1084 · Cited by 128 · see citing works
Toward a Genetic Dissection of Cortical Circuits in the Mouse
Huang, Z. J. (2014) · Neuron · doi:10.1016/j.neuron.2014.08.041 · Cited by 123 · see citing works
Sheets, P. L., Suter, B. A., Kiritani, T., Chan, C. S., Surmeier, D. J., & Shepherd, G. M. (2011) · Journal of Neurophysiology · doi:10.1152/jn.00232.2011 · Cited by 117 · see citing works
Self-citationLong-range GABAergic connections distributed throughout the neocortex and their possible function
Tamamaki, N., & Tomioka, R. (2010) · Frontiers in Neuroscience · doi:10.3389/fnins.2010.00202 · Cited by 116 · see citing works
Zhang, Z.-W., & Deschênes, M. (1998) · Cerebral Cortex · doi:10.1093/cercor/8.5.428 · Cited by 112 · see citing works
Sonic Hedgehog Expression in Corticofugal Projection Neurons Directs Cortical Microcircuit Formation
Harwell, C. C., Parker, P. R. L., Gee, S. M., Okada, A., McConnell, S. K., Kreitzer, A. C., & Kriegstein, A. R. (2012) · Neuron · doi:10.1016/j.neuron.2012.02.009 · Cited by 110 · see citing works
Helmstaedter, M. N., Staiger, J. F., Sakmann, B. J., & Feldmeyer, D. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.5701-07.2008 · Cited by 109 · see citing works
Smith, P. H., Uhlrich, D. J., Manning, K., & Banks, M. I. (2011) · The Journal of Comparative Neurology · doi:10.1002/cne.22682 · Cited by 109 · see citing works
Activity of Different Classes of Neurons of the Motor Cortex during Postural Corrections
Beloozerova, I. N., Sirota, M. G., Swadlow, H. A., Orlovsky, G. N., Popova, L. B., & Deliagina, T. G. (2003) · Journal of Neuroscience · doi:10.1523/jneurosci.23-21-07844.2003 · Cited by 107 · see citing works
Thalamocortical control of feed–forward inhibition in awake somatosensory ‘barrel’ cortex
Swadlow, H. A. (2002) · Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences · doi:10.1098/rstb.2002.1156 · Cited by 107 · see citing works
de Kock, C. P. J., & Sakmann, B. J. (2008) · The Journal of Physiology · doi:10.1113/jphysiol.2008.155580 · Cited by 107 · see citing works
Genetic dissection of GABAergic neural circuits in mouse neocortex
Taniguchi, H. (2014) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2014.00008 · Cited by 106 · see citing works
Heterogeneity of rat corticospinal neurons
Tseng, G., & Prince, D. A. (1993) · The Journal of Comparative Neurology · doi:10.1002/cne.903350107 · Cited by 105 · see citing works
Subcortical projections from ectopic neocortical neurons.
Jensen, K. F., & Killackey, H. P. (1984) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.81.3.964 · Cited by 105 · see citing works
Pathfinding of Corticothalamic Axons Relies on a Rendezvous with Thalamic Projections
Deck, M., Lokmane, L., Chauvet, S., et al. (2013) · Neuron · doi:10.1016/j.neuron.2012.11.031 · Cited by 105 · see citing works
Corticospinal neurones. Their role in movement.
Phillips, C. G., & Porter, R. W. (1977) · PubMed · Cited by 98 · see citing works
Callaway, E. M., & Borrell, V. (2011) · The Journal of Neuroscience · doi:10.1523/jneurosci.5222-10.2011 · Cited by 95 · see citing works
Yang, W., Carrasquillo, Y., Hooks, B. M., Nerbonne, J. M., & Burkhalter, A. (2013) · Journal of Neuroscience · doi:10.1523/jneurosci.2515-13.2013 · Cited by 94 · see citing works
The Functional Properties of Barrel Cortex Neurons Projecting to the Primary Motor Cortex
Sato, T. R., & Svoboda, K. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.3774-09.2010 · Cited by 94 · see citing works
Suter, B. A., Migliore, M., & Shepherd, G. M. (2012) · Cerebral Cortex · doi:10.1093/cercor/bhs184 · Cited by 87 · see citing works
Self-citationSegregation of feedforward and feedback projections in mouse visual cortex
Berezovskii, V. K., Nassi, J. J., & Born, R. T. (2011) · Journal of Comparative Neurology · doi:10.1002/cne.22675 · Cited by 84 · see citing works
Area 4 has layer <scp>IV</scp> in adult primates
García‐Cabezas, M. Á., & Barbas, H. (2014) · European Journal of Neuroscience · doi:10.1111/ejn.12585 · Cited by 81 · see citing works
Modulator property of the intrinsic cortical projection from layer 6 to layer 4
Lee, C. C. (2009) · Frontiers in Systems Neuroscience · doi:10.3389/neuro.06.003.2009 · Cited by 80 · see citing works
Christophe, E., Doerflinger, N., Lavery, D. J., Molnár, Z., Charpak, S., & Audinat, É. (2005) · Journal of Neurophysiology · doi:10.1152/jn.00076.2005 · Cited by 79 · see citing works
Three Channels of Corticothalamic Communication during Locomotion
Sirota, M. G., Swadlow, H. A., & Beloozerova, I. N. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.0489-05.2005 · Cited by 66 · see citing works
Hooser, S. D. V., Roy, A., Rhodes, H. J., Culp, J. H., & Fitzpatrick, D. (2013) · Journal of Neuroscience · doi:10.1523/jneurosci.1464-13.2013 · Cited by 62 · see citing works
Region-Specific Spike-Frequency Acceleration in Layer 5 Pyramidal Neurons Mediated by Kv1 Subunits
Miller, M. N., Okaty, B. W., & Nelson, S. B. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.2940-08.2008 · Cited by 60 · see citing works
Staiger, J. F., Bojak, I., Miceli, S., & Schubert, D. (2014) · Brain Structure and Function · doi:10.1007/s00429-014-0726-8 · Cited by 58 · see citing works
Neocortical arealization: Evolution, mechanisms, and open questions
Alfano, C., & Studer, M. (2012) · Developmental Neurobiology · doi:10.1002/dneu.22067 · Cited by 57 · see citing works
Local connections of excitatory neurons in motor-associated cortical areas of the rat
Kaneko, T. (2013) · Frontiers in Neural Circuits · doi:10.3389/fncir.2013.00075 · Cited by 56 · see citing works
Molecular analysis of neocortical layer structure in the ferret
Rowell, J. J., Mallik, A. K., Dugas‐Ford, J., & Ragsdale, C. W. (2010) · The Journal of Comparative Neurology · doi:10.1002/cne.22399 · Cited by 55 · see citing works
Ueta, Y., Hirai, Y., Otsuka, T., & Kawaguchi, Y. (2013) · Frontiers in Neural Circuits · doi:10.3389/fncir.2013.00164 · Cited by 46 · see citing works
Intracortical cartography in an agranular area
Shepherd, G. M. (2009) · Frontiers in Neuroscience · doi:10.3389/neuro.01.030.2009 · Cited by 45 · see citing works
Self-citationAn Architectonic Study of the Neocortex of the Short-Tailed Opossum (Monodelphis domestica)
Wong, P., & Kaas, J. H. (2009) · Brain Behavior and Evolution · doi:10.1159/000225381 · Cited by 45 · see citing works
da Costa, N. M., & Martin, K. A. C. (2009) · Journal of Neuroscience · doi:10.1523/jneurosci.2785-09.2009 · Cited by 44 · see citing works
Evolution of brains and behavior for optimal foraging: A tale of two predators
Catania, K. C. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1201885109 · Cited by 39 · see citing works
Area‐specific substratification of deep layer neurons in the rat cortex
Watakabe, A., Hirokawa, J., Ichinohe, N., Ohsawa, S., Kaneko, T., Rockland, K. S., & Yamamori, T. (2012) · The Journal of Comparative Neurology · doi:10.1002/cne.23160 · Cited by 38 · see citing works
Bai, W.-Z., Ishida, M., & Arimatsu, Y. (2003) · Neuroscience · doi:10.1016/j.neuroscience.2003.08.056 · Cited by 32 · see citing works
Imai, H., Yamamoto, T., Katsuyama, Y., Kikkawa, S., & Terashima, T. (2012) · PubMed · doi:10.24546/81005032 · Cited by 7 · see citing works
Flagged first, then by citations
Research works printed but not linked: 5
- [14]von Economo C The Cytoarchitectonics of the Human Cerebral Cortex Oxford University Press London 1929
- [20]Lorente de No R Cerebral Cortex: Architecture, Intracortical Connections, Motor Projections Physiology of the Nervous System 3 Fulton JF 288 330 Oxford University Press London 1949
- [21]Evarts EV Shinoda Y Wise SP Neurophysiological approaches to higher brain functions John Wiley & Sons New York 1984
- [32]Hooks BM Laminar organization of long-range excitatory input to mouse motor cortex Journal of Neuroscience 33 748 760 2013 23303952 PMC3710148
- [115]Zhou M Scaling down of balanced excitation and inhibition by active behavioral states in auditory cortex Nature neuroscience 2014 PMC4108079 24747575
Cited by
Sorted by citations
Deep Convolutional Neural Networks for Image Classification: A Comprehensive Review
Rawat, W., & Wang, Z. (2017) · Neural Computation · doi:10.1162/neco_a_00990 · Cited by 3,503 · see citing works
Shared and distinct transcriptomic cell types across neocortical areas
Tasic, B., Yao, Z., Graybuck, L. T., Smith, K. A., Nguyen, T. N., Bertagnolli, D., Goldy, J., Garren, E., Economo, M. N., Viswanathan, S., et al. (2018) · Nature · doi:10.1038/s41586-018-0654-5 · Cited by 1,746 · see citing works
Integrated information theory: from consciousness to its physical substrate
Tononi, G., Boly, M., Massimini, M., & Koch, C. (2016) · Nature Reviews Neuroscience · doi:10.1038/nrn.2016.44 · Cited by 1,727 · see citing works
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
Tasic, B., Menon, V., Nguyen, T. N., Kim, T. K., Jarsky, T., Yao, Z., Levi, B., Gray, L. T., Sorensen, S. A., Dolbeare, T., et al. (2016) · Nature Neuroscience · doi:10.1038/nn.4216 · Cited by 1,714 · see citing works
Reconstruction and Simulation of Neocortical Microcircuitry
Markram, H., Muller, E., Ramaswamy, S., Reimann, M. W., Abdellah, M., Sanchez, C. A., Ailamaki, A., Alonso-Nanclares, L., Antille, N., Arsever, S., et al. (2015) · Cell · doi:10.1016/j.cell.2015.09.029 · Cited by 1,705 · see citing works
Neural correlates of consciousness: progress and problems
Koch, C., Massimini, M., Boly, M., & Tononi, G. (2016) · Nature Reviews Neuroscience · doi:10.1038/nrn.2016.22 · Cited by 1,600 · see citing works
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
Maynard, K. R., Collado-Torres, L., Weber, L. M., Uytingco, C., Barry, B. K., Williams, S. R., Catallini, J. L., Tran, M. N., Besich, Z., Tippani, M., et al. (2021) · Nature Neuroscience · doi:10.1038/s41593-020-00787-0 · Cited by 1,222 · see citing works
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Yao, Z., van Velthoven, C. T. J., Nguyen, T. N., Goldy, J., Sedeno-Cortes, A. E., Baftizadeh, F., Bertagnolli, D., Casper, T., Chiang, M., Crichton, K., et al. (2021) · Cell · doi:10.1016/j.cell.2021.04.021 · Cited by 1,065 · see citing works
Principles of connectivity among morphologically defined cell types in adult neocortex
Jiang, X., Shen, S., Cadwell, C. R., Berens, P., Sinz, F., Ecker, A. S., Patel, S., & Tolias, A. S. (2015) · Science · doi:10.1126/science.aac9462 · Cited by 908 · see citing works
Hippocampal GABAergic Inhibitory Interneurons
Pelkey, K. A., Chittajallu, R., Craig, M. T., Tricoire, L., Wester, J. C., & McBain, C. J. (2017) · Physiological Reviews · doi:10.1152/physrev.00007.2017 · Cited by 889 · see citing works
Hierarchical organization of cortical and thalamic connectivity
Harris, J. A., Mihalas, S., Hirokawa, K. E., Whitesell, J. D., Choi, H., Bernard, A., Bohn, P., Caldejon, S., Casal, L., Cho, A., et al. (2019) · Nature · doi:10.1038/s41586-019-1716-z · Cited by 785 · see citing works
Predictive Processing: A Canonical Cortical Computation
Keller, G. B., & Mrsic-Flogel, T. D. (2018) · Neuron · doi:10.1016/j.neuron.2018.10.003 · Cited by 836 · see citing works
Fused cerebral organoids model interactions between brain regions
Bagley, J. A., Reumann, D., Bian, S., Lévi-Strauss, J., & Knoblich, J. A. (2017) · Nature Methods · doi:10.1038/nmeth.4304 · Cited by 790 · see citing works
Cortical layer-specific critical dynamics triggering perception
Marshel, J. H., Kim, Y. S., Machado, T. A., Quirin, S., Benson, B., Kadmon, J., Raja, C., Chibukhchyan, A., Ramakrishnan, C., Inoue, M., et al. (2019) · Science · doi:10.1126/science.aaw5202 · Cited by 652 · see citing works
Uncertainty and stress: Why it causes diseases and how it is mastered by the brain
Peters, A., McEwen, B. S., & Friston, K. (2017) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2017.05.004 · Cited by 652 · see citing works
A multimodal cell census and atlas of the mammalian primary motor cortex
BRAIN Initiative Cell Census Network (BICCN), BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Callaway, E. M., Dong, H.-W., Ecker, J. R., Hawrylycz, M. J., Huang, Z. J., Lein, E. S., Ngai, J., Osten, P., et al. (2021) · Nature · doi:10.1038/s41586-021-03950-0 · Cited by 522 · see citing works
Dopamine and Cognitive Control in Prefrontal Cortex
Ott, T., & Nieder, A. (2019) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2018.12.006 · Cited by 530 · see citing works
A comprehensive excitatory input map of the striatum reveals novel functional organization
Hunnicutt, B. J., Jongbloets, B. C., Birdsong, W. T., Gertz, K. J., Zhong, H., & Mao, T. (2016) · eLife · doi:10.7554/elife.19103 · Cited by 536 · see citing works
Astrocytic neuroligins control astrocyte morphogenesis and synaptogenesis
Stogsdill, J. A., Ramirez, J., Liu, D., Kim, Y. H., Baldwin, K. T., Enustun, E., Ejikeme, T., Ji, R.-R., & Eroglu, C. (2017) · Nature · doi:10.1038/nature24638 · Cited by 506 · see citing works
Classification of electrophysiological and morphological neuron types in the mouse visual cortex
Gouwens, N. W., Sorensen, S. A., Berg, J., Lee, C., Jarsky, T., Ting, J., Sunkin, S. M., Feng, D., Anastassiou, C. A., Barkan, E., et al. (2019) · Nature Neuroscience · doi:10.1038/s41593-019-0417-0 · Cited by 456 · see citing works
Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex
Hrvatin, S., Hochbaum, D. R., Nagy, M. A., Cicconet, M., Robertson, K., Cheadle, L., Zilionis, R., Ratner, A., Borges-Monroy, R., Klein, A. M., et al. (2018) · Nature Neuroscience · doi:10.1038/s41593-017-0029-5 · Cited by 497 · see citing works
What is a cell type and how to define it?
Zeng, H. (2022) · Cell · doi:10.1016/j.cell.2022.06.031 · Cited by 439 · see citing works
Development and arealization of the cerebral cortex
Cadwell, C. R., Bhaduri, A., Mostajo-Radji, M. A., Keefe, M. G., & Nowakowski, T. J. (2019) · Neuron · doi:10.1016/j.neuron.2019.07.009 · Cited by 408 · see citing works
Morphological diversity of single neurons in molecularly defined cell types
Peng, H., Xie, P., Liu, L., Kuang, X., Wang, Y., Qu, L., Gong, H., Jiang, S., Li, A., Ruan, Z., et al. (2021) · Nature · doi:10.1038/s41586-021-03941-1 · Cited by 417 · see citing works
Phenotypic variation of transcriptomic cell types in mouse motor cortex
Scala, F., Kobak, D., Bernabucci, M., Bernaerts, Y., Cadwell, C. R., Castro, J. R., Hartmanis, L., Jiang, X., Laturnus, S., Miranda, E., et al. (2021) · Nature · doi:10.1038/s41586-020-2907-3 · Cited by 398 · see citing works
“For decades, neurons have been classified into types by their anatomical and physiological characteristics, and more recently by molecular markers 1,2,12,13 .”
Güntürkün, O., & Bugnyar, T. (2016) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2016.02.001 · Cited by 388 · see citing works
General anesthesia decouples cortical pyramidal neurons
Suzuki, M., & Larkum, M. E. (2020) · Cell · doi:10.1016/j.cell.2020.01.024 · Cited by 348 · see citing works
Strategies and Tools for Combinatorial Targeting of GABAergic Neurons in Mouse Cerebral Cortex
He, M., Tucciarone, J., Lee, S., Nigro, M. J., Kim, Y., Levine, J. M., Kelly, S. M., Krugikov, I., Wu, P., Chen, Y., et al. (2016) · Neuron · doi:10.1016/j.neuron.2016.08.021 · Cited by 339 · see citing works
Cellular Mechanisms of Conscious Processing
Aru, J., Suzuki, M., & Larkum, M. E. (2020) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2020.07.006 · Cited by 321 · see citing works
“This is an important constraint from neurobiology, because L5p neurons are the key output of the cerebral cortex and broadcast the outcome of dendritic integration to diverse regions of the brain [72].”
BackgroundMohan, H., Verhoog, M. B., Doreswamy, K. K., Eyal, G., Aardse, R., Lodder, B. N., Goriounova, N. A., Asamoah, B., B. Brakspear, A. B. C., Groot, C., et al. (2015) · Cerebral Cortex · doi:10.1093/cercor/bhv188 · Cited by 280 · see citing works
Circuit organization of the rodent medial prefrontal cortex
Anastasiades, P. G., & Carter, A. G. (2021) · Trends in Neurosciences · doi:10.1016/j.tins.2021.03.006 · Cited by 314 · see citing works
Single-neuron projectome of mouse prefrontal cortex
Gao, L., Liu, S., Gou, L., Hu, Y., Liu, Y., Deng, L., Ma, D., Wang, H., Yang, Q., Chen, Z., et al. (2022) · Nature Neuroscience · doi:10.1038/s41593-022-01041-5 · Cited by 264 · see citing works
Single-cell brain organoid screening identifies developmental defects in autism
Li, C., Fleck, J. S., Martins-Costa, C., Burkard, T. R., Themann, J., Stuempflen, M., Peer, A. M., Vertesy, Á., Littleboy, J. B., Esk, C., et al. (2023) · Nature · doi:10.1038/s41586-023-06473-y · Cited by 283 · see citing works
“Perturbations of LEO1 and TCF20 caused an enrichment of L4 neurons, which is a cell population critical for rapid sensory response that serves as the first level of sensory signal processing in cortical neurons (29).”
BackgroundMolecular signatures underlying neurofibrillary tangle susceptibility in Alzheimer’s disease
Otero-Garcia, M., Mahajani, S. U., Wakhloo, D., Tang, W., Xue, Y.-Q., Morabito, S., Pan, J., Oberhauser, J., Madira, A. E., Shakouri, T., et al. (2022) · Neuron · doi:10.1016/j.neuron.2022.06.021 · Cited by 262 · see citing works
Active dendritic currents gate descending cortical outputs in perception
Takahashi, N., Ebner, C., Sigl-Glöckner, J., Moberg, S., Nierwetberg, S., & Larkum, M. E. (2020) · Nature Neuroscience · doi:10.1038/s41593-020-0677-8 · Cited by 231 · see citing works
The diversity of GABAergic neurons and neural communication elements
Huang, Z. J., & Paul, A. (2019) · Nature Reviews Neuroscience · doi:10.1038/s41583-019-0195-4 · Cited by 201 · see citing works
Prönneke, A., Scheuer, B., Wagener, R. J., Möck, M., Witte, M., & Staiger, J. F. (2015) · Cerebral Cortex · doi:10.1093/cercor/bhv202 · Cited by 204 · see citing works
Delay activity of specific prefrontal interneuron subtypes modulates memory-guided behavior
Kamigaki, T., & Dan, Y. (2017) · Nature Neuroscience · doi:10.1038/nn.4554 · Cited by 208 · see citing works
Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas
Scala, F., Kobak, D., Shan, S., Bernaerts, Y., Laturnus, S., Cadwell, C. R., Hartmanis, L., Froudarakis, E., Castro, J. R., Tan, Z. H., et al. (2019) · Nature Communications · doi:10.1038/s41467-019-12058-z · Cited by 193 · see citing works
Cooperative subnetworks of molecularly similar interneurons in mouse neocortex
Karnani, M. M., Jackson, J., Ayzenshtat, I., Tucciarone, J., Manoocheri, K., Snider, W. G., & Yuste, R. (2016) · Neuron · doi:10.1016/j.neuron.2016.02.037 · Cited by 196 · see citing works
Coupling the State and Contents of Consciousness
Aru, J., Suzuki, M., Rutiku, R., Larkum, M. E., & Bachmann, T. (2019) · Frontiers in Systems Neuroscience · doi:10.3389/fnsys.2019.00043 · Cited by 164 · see citing works
An atlas of gene regulatory elements in adult mouse cerebrum
Li, Y. E., Preissl, S., Hou, X., Zhang, Z., Zhang, K., Qiu, Y., Poirion, O. B., Li, B., Chiou, J., Liu, H., et al. (2021) · Nature · doi:10.1038/s41586-021-03604-1 · Cited by 185 · see citing works
Neuronal circuits in barrel cortex for whisker sensory perception
Staiger, J. F., & Petersen, C. C. H. (2021) · Physiological Reviews · doi:10.1152/physrev.00019.2019 · Cited by 165 · see citing works
NetPyNE, a tool for data-driven multiscale modeling of brain circuits
Dura-Bernal, S., Suter, B. A., Gleeson, P., Cantarelli, M., Quintana, A., Rodriguez, F., Kedziora, D. J., Chadderdon, G. L., Kerr, C. C., Neymotin, S. A., et al. (2019) · eLife · doi:10.7554/elife.44494 · Cited by 169 · see citing works
Self-citationA genuine layer 4 in motor cortex with prototypical synaptic circuit connectivity
Yamawaki, N., Borges, K., Suter, B. A., Harris, K. D., & Shepherd, G. M. G. (2014) · eLife · doi:10.7554/elife.05422 · Cited by 141 · see citing works
Self-citationInducing Different Neuronal Subtypes from Astrocytes in the Injured Mouse Cerebral Cortex
Mattugini, N., Bocchi, R., Scheuss, V., Russo, G. L., Torper, O., Lao, C. L., & Götz, M. (2019) · Neuron · doi:10.1016/j.neuron.2019.08.009 · Cited by 159 · see citing works
Genetic dissection of the glutamatergic neuron system in cerebral cortex
Matho, K. S., Huilgol, D., Galbavy, W., He, M., Kim, G., An, X., Lu, J., Wu, P., Di Bella, D. J., Shetty, A. S., et al. (2021) · Nature · doi:10.1038/s41586-021-03955-9 · Cited by 155 · see citing works
Complementary networks of cortical somatostatin interneurons enforce layer specific control
Naka, A., Veit, J., Shababo, B., Chance, R. K., Risso, D., Stafford, D., Snyder, B., Egladyous, A., Chu, D., Sridharan, S., et al. (2019) · eLife · doi:10.7554/elife.43696 · Cited by 117 · see citing works
Genetically identified amygdala–striatal circuits for valence-specific behaviors
Zhang, X., Guan, W., Yang, T., Furlan, A., Xiao, X., Yu, K., An, X., Galbavy, W., Ramakrishnan, C., Deisseroth, K., et al. (2021) · Nature Neuroscience · doi:10.1038/s41593-021-00927-0 · Cited by 126 · see citing works
Chrna2-Martinotti cells synchronize layer 5 type A pyramidal cells via rebound excitation
Hilscher, M. M., Leão, R. N., Edwards, S. J., Leão, K. E., & Kullander, K. (2017) · PLoS Biology · doi:10.1371/journal.pbio.2001392 · Cited by 118 · see citing works
Cell Type-Specific Structural Organization of the Six Layers in Rat Barrel Cortex
Narayanan, R. T., Udvary, D., & Oberlaender, M. (2017) · Frontiers in Neuroanatomy · doi:10.3389/fnana.2017.00091 · Cited by 100 · see citing works
Thalamic contributions to the state and contents of consciousness
Whyte, C. J., Redinbaugh, M. J., Shine, J. M., & Saalmann, Y. B. (2024) · Neuron · doi:10.1016/j.neuron.2024.04.019 · Cited by 105 · see citing works
Different population dynamics in the supplementary motor area and motor cortex during reaching
Lara, A. H., Cunningham, J. P., & Churchland, M. M. (2018) · Nature Communications · doi:10.1038/s41467-018-05146-z · Cited by 101 · see citing works
Xu, X., Olivas, N. D., Ikrar, T., Peng, T., Holmes, T. C., Nie, Q., & Shi, Y. (2016) · The Journal of Physiology · doi:10.1113/jp271891 · Cited by 83 · see citing works
Dense functional and molecular readout of a circuit hub in sensory cortex
Condylis, C., Ghanbari, A., Manjrekar, N., Bistrong, K., Yao, S., Yao, Z., Nguyen, T. N., Zeng, H., Tasic, B., & Chen, J. L. (2022) · Science · doi:10.1126/science.abl5981 · Cited by 81 · see citing works
Blankvoort, S., Witter, M. P., Noonan, J., Cotney, J., & Kentros, C. (2018) · Current Biology · doi:10.1016/j.cub.2018.05.015 · Cited by 72 · see citing works
A human-specific modifier of cortical connectivity and circuit function
Schmidt, E. R. E., Zhao, H. T., Park, J. M., Dipoppa, M., Monsalve-Mercado, M. M., Dahan, J. B., Rodgers, C. C., Lejeune, A., Hillman, E. M. C., Miller, K. D., et al. (2021) · Nature · doi:10.1038/s41586-021-04039-4 · Cited by 82 · see citing works
How deep is the brain? The shallow brain hypothesis
Suzuki, M., Pennartz, C. M. A., & Aru, J. (2023) · Nature Reviews Neuroscience · doi:10.1038/s41583-023-00756-z · Cited by 79 · see citing works
Efficient probabilistic inference in generic neural networks trained with non-probabilistic feedback
Orhan, A. E., & Ma, W. J. (2017) · Nature Communications · doi:10.1038/s41467-017-00181-8 · Cited by 77 · see citing works
A genetically defined insula-brainstem circuit selectively controls motivational vigor
Deng, H., Xiao, X., Yang, T., Ritola, K., Hantman, A., Li, Y., Huang, Z. J., & Li, B. (2021) · Cell · doi:10.1016/j.cell.2021.11.019 · Cited by 75 · see citing works
Bhattacherjee, A., Zhang, C., Watson, B. R., Djekidel, M. N., Moffitt, J. R., & Zhang, Y. (2023) · Nature Neuroscience · doi:10.1038/s41593-023-01455-9 · Cited by 71 · see citing works
Exploring functions for the non-lemniscal auditory thalamus
Lee, C. C. (2015) · Frontiers in Neural Circuits · doi:10.3389/fncir.2015.00069 · Cited by 63 · see citing works
Neocortical layer 5 subclasses: from cellular properties to roles in behavior
Moberg, S., & Takahashi, N. (2022) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2022.1006773 · Cited by 62 · see citing works
Dendritic integration theory: A thalamo-cortical theory of state and content of consciousness
Bachmann, T., Suzuki, M., & Aru, J. (2020) · Philosophy and the Mind Sciences · doi:10.33735/phimisci.2020.ii.52 · Cited by 61 · see citing works
Cognitive functions of intracellular mechanisms for contextual amplification
Phillips, W. A. (2017) · Brain and Cognition · doi:10.1016/j.bandc.2015.09.005 · Cited by 62 · see citing works
Genetic Single Neuron Anatomy Reveals Fine Granularity of Cortical Axo-Axonic Cells
Wang, X., Tucciarone, J., Jiang, S., Yin, F., Wang, B.-S., Wang, D., Jia, Y., Jia, X., Li, Y., Yang, T., et al. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.02.040 · Cited by 56 · see citing works
Arena, A., Comolatti, R., Thon, S., Casali, A. G., & Storm, J. F. (2021) · eneuro · doi:10.1523/eneuro.0343-20.2021 · Cited by 66 · see citing works
Peng, H., Xie, P., Liu, L., Kuang, X., Wang, Y., Qu, L., Gong, H., Jiang, S., Li, A., Ruan, Z., et al. (2019) · doi:10.1101/675280 · Cited by 47 · see citing works
Zhang, M., Eichhorn, S. W., Zingg, B., Yao, Z., Zeng, H., Dong, H., & Zhuang, X. (2020) · doi:10.1101/2020.06.04.105700 · Cited by 44 · see citing works
Cellular Anatomy of the Mouse Primary Motor Cortex
Muñoz-Castañeda, R., Zingg, B., Matho, K. S., Wang, Q., Chen, X., Foster, N. N., Narasimhan, A., Li, A., Hirokawa, K. E., Huo, B., et al. (2020) · doi:10.1101/2020.10.02.323154 · Cited by 270 · see citing works
Corticothalamic pathways from layer 5: emerging roles in computation and pathology
Mease, R. A., & Gonzalez, A. J. (2021) · Frontiers in Neural Circuits · doi:10.3389/fncir.2021.730211 · Cited by 36 · see citing works
Sleep/wake changes in perturbational complexity in rats and mice
Cavelli, M. L., Mao, R., Findlay, G., Driessen, K., Bugnon, T., Tononi, G., & Cirelli, C. (2023) · iScience · doi:10.1016/j.isci.2023.106186 · Cited by 46 · see citing works
Pennartz, C. M. A., Oude Lohuis, M. N., & Olcese, U. (2023) · Philosophical Transactions of the Royal Society B · doi:10.1098/rstb.2022.0336 · Cited by 38 · see citing works
Cortico-thalamo-cortical interactions modulate electrically evoked EEG responses in mice
Claar, L. D., Rembado, I., Kuyat, J. R., Russo, S., Marks, L. C., Olsen, S. R., & Koch, C. (2023) · eLife · doi:10.7554/elife.84630.3 · Cited by 36 · see citing works
An Atlas of Gene Regulatory Elements in Adult Mouse Cerebrum
Li, Y. E., Preissl, S., Hou, X., Zhang, Z., Zhang, K., Fang, R., Qiu, Y., Poirion, O., Li, B., Liu, H., et al. (2020) · doi:10.1101/2020.05.10.087585 · Cited by 187 · see citing works
Matho, K. S., Huilgol, D., Galbavy, W., He, M., Kim, G., An, X., Lu, J., Wu, P., Di Bella, D. J., Shetty, A. S., et al. (2020) · doi:10.1101/2020.04.22.054064 · Cited by 20 · see citing works
Epigenomic Diversity of Cortical Projection Neurons in the Mouse Brain
Zhang, Z., Zhou, J., Tan, P., Pang, Y., Rivkin, A., Kirchgessner, M. A., Williams, E., Lee, C.-T., Liu, H., Franklin, A. D., et al. (2020) · doi:10.1101/2020.04.01.019612 · Cited by 75 · see citing works
Laminar specificity of the auditory perceptual awareness negativity: a biophysical modeling study
Fernandez Pujol, C., Blundon, E. G., & Dykstra, A. R. (2023) · PLOS Computational Biology · doi:10.1371/journal.pcbi.1011003 · Cited by 14 · see citing works
The Cooperative Neuron: Cellular Foundations of Mental Life
Phillips, W. A. (2023) · doi:10.1093/oso/9780198876984.001.0001 · Cited by 13 · see citing works
The myth of the Bayesian brain
Mangalam, M. (2025) · European Journal of Applied Physiology · doi:10.1007/s00421-025-05855-6 · Cited by 14 · see citing works
“…anatomical specialization with distinct cell types, circuit motifs, and processing principles across regions—from the unique neuronal types of the cerebellum to the columnar organization of sensory cortices to the distinct micro-circuits of the basal ganglia (Harris and Shepherd 2015; Nelken 2004).”
Rethinking Predictive Processing
Furutachi, S., & Hofer, S. B. (2026) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-102124-031410 · Cited by 3 · see citing works
Uncovering the signatures of aging and senescence in the human dorsolateral prefrontal cortex
Sloan, N. X., Mares, J., Daly, A. C., Grier, S., Haq, I., Jackson, C. A., Barretto, N., Casel, O., Kang, K., Khiste, S., et al. (2026) · Cell Genomics · doi:10.1016/j.xgen.2025.101127 · Cited by 2 · see citing works
“Importantly, we found that layer marker distributions within our AARs agreed with the biology described in the literature, 11,48 with RELN displaying the highest level of expression in annotated layer 1, CARTPT in layers 2 and 3, RORB in layer 4, PCP4 in layers 4 and 5, and MOBP in the white matter…”
Self-citationHierarchical sensory processing in zebrafish thalamocortical-like circuits
Trinh, A.-T., Ostenrath, A. M., del Castillo-Berges, I., Cachin, F., Koç, M., Kraus, S., Serneels, B., Kawakami, K., & Yaksi, E. (2026) · Science · doi:10.1126/science.aec2171 · Cited by 5 · see citing works
- Authors
- Harris, K. D., & Shepherd, G. M. G.
- Affiliations
- UCL Queen Square Institute of Neurology (GB)
- Northwestern University (US)
- Corresponding author
- Harris, Kenneth D
- Shepherd, Gordon M G
- ORCID
- Shepherd, Gordon M G
- Venue
- Nature Neuroscience
- Published
- 2015-01-27
- Volume
- 18
- Issue
- 2
- Pages
- 170-181
- ISSN
- 1097-6256 (ISSN-L)
- 1546-1726
- PMC
- PMC4889215
- OpenAlex
- W2040868835
- Cited by
- 1,215
- References
- 150
- Citations by year
- 2026: 127 · 2025: 157 · 2024: 117 · 2023: 147 · 2022: 108 · 2021: 103 · 2020: 99 · 2019: 104 · 2018: 79 · 2017: 89 · 2016: 56 · 2015: 28 · 2014: 1
- FWCI
- 8.26
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Neuroscience (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- Wellcome Trust (095668)
- Engineering and Physical Sciences Research Council (EP/I005102/1, EP/I005102/2, EP/K015141/1)
- National Institute on Deafness and Other Communication Disorders (R56DC013272, DC013272)
- National Institute of Neurological Disorders and Stroke (NS061963, R01NS061963, NS087479, R21NS087479, R37NS061963)
- National Institute of Biomedical Imaging and Bioengineering (U01EB017695, EB017695)
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Neural dynamics and brain function
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Neuroscience › Cognitive Neuroscience › Memory and Neural Mechanisms
- Keywords
- neocortical circuits, cortical connectivity, species-specific variation, cortical neurons, long-range connectivity, local connectivity, gene expression, in vivo neuronal activity, sensory processing, motor control, higher cognition
- MeSH terms
- Animals, Humans, Interneurons, Nerve Net, Neocortex
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review