Therapeutic glycoprotein production in mammalian cells
Open accessAbstract
Over the last years, the biopharmaceutical industry has significantly turned its biologics production towards mammalian cell expression systems. The presence of glycosylation machineries within these systems, and the fact that monoclonal antibodies represent today the vast majority of new therapeutic candidates, has largely influenced this new direction. Recombinant glycoproteins, including monoclonal antibodies, have shown different biological properties based on their glycan profiles. Thus, the industry has developed cell engineering strategies not only to improve cell's specific productivity, but also to adapt their glycosylation profiles for increased therapeutic activity. Additionally, the advance of "omics" technologies has recently given rise to new possibilities in improving these expression platforms and will significantly help developing new strategies, in particular for CHO (Chinese Hamster Ovary) cells.
AI snapshot
Written from the paper’s full text.
TL;DR
This review summarizes mammalian-cell production of therapeutic glycoproteins, with a focus on CHO cells, cell-engineering strategies, glycoengineering, and “omics” tools. It argues that CHO remains dominant, while human cell lines and targeted glycoengineering offer routes to more human-like glycosylation and improved therapeutic activity.
Key findings
- CHO cells are involved in production of over 70% of recombinant biopharmaceutical proteins, most of them monoclonal antibodies; in 2015, more than half of the thirteen new biologics approved were recombinant proteins produced in CHO cells, with the same trend observed in 2016.
- CHO cells cannot perform some human glycosylation, such as α-2,6-sialylation and α-1,3/4-fucosylation, and can produce Neu5Gc and α-gal at low levels (e.g., <2% and <0.2%, respectively); murine myeloma cells can produce these at considerably higher levels, increasing immunogenicity risk.
- Human cell lines such as HEK293 and HT-1080 can provide more human-like glycosylation; examples include rFVIIIFc and rFIXFc produced in HEK293 with greater tyrosine sulfation and γ-carboxylation and no α-gal or Neu5Gc compared with CHO.
- Glycoengineering strategies focus on reducing fucosylation to enhance ADCC and increasing sialylation to improve half-life; omics efforts include CHO genome sequencing, transcriptomic assembly of 29,000 transcripts and 13,187 mRNA transcripts, and proteomic identification of 6,164 proteins from CHO-K1 proteome/glycoproteome.
Methods
- Narrative review of mammalian expression systems, cell engineering, glycoengineering, and “omics” approaches for therapeutic glycoprotein production.
- No primary experimental design, sample, or statistical analysis is reported; the paper synthesizes published literature and examples from industry and academic studies.
- Main analysis is qualitative synthesis of expression hosts, selection/gene-expression systems, cell growth and secretion engineering, glycosylation engineering, and genomics/transcriptomics/proteomics/metabolomics.
Limitations
- The paper does not state explicit limitations.
- Evident from the text: it is a narrative review without a systematic search strategy, inclusion criteria, or quantitative meta-analysis, so coverage and conclusions are selective.
- The text itself notes conflicting or mixed results for several strategies, including anti-apoptosis engineering, chaperone overexpression, and MAR element activity, indicating that some conclusions remain uncertain.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
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Cites
Statistics
Claims the paper makes
68 of 241 cited sources checked · 32 supported · 0 flagged · accuracy not yet measured
- Premisecitation
Different gene amplification systems developed and used in CHO cells allow high titer yields and good specific productivity.
“Moreover, different gene amplification systems have been developed and used in CHO cells, which allow for high titer yields and good specific productivity (Durocher and Butler, 2009;Kim et al., 2012;Lai et al., 2013).”
Quote in the paperNot a substantial claim1 of 3 sources checked - Interpretationcitation
Because CHO cells produce recombinant glycoproteins with human-like glycans, the generated products are more likely to be compatible and bioactive within human hosts.
“Since CHO cells produce recombinant glycoproteins with human-like glycans, the generated products are to more likely be compatible and bioactive within human hosts (Kim et al., 2012;Lai et al., 2013).”
Quote in the paperSubstantial claim1 of 2 sources checked - Premisecitation
CHO cells have limited ability to gamma-carboxylate recombinant proteins such as clotting factors.
“CHO cells also have limited ability to gamma-carboxylate recombinant proteins such as clotting factors (Kumar 2015), even though some improvements have been achieved through metabolic engineering work (Rehemtulla et al., 1993;Liu et al., 2014).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites Kumar 2015 source
- cites Rehemtulla et al., 1993 source
The paper reports that expressing gamma-carboxylase in CHO cells increased in vitro enzyme activity, but did not improve the specific procoagulant activity of secreted factor IX. Expressing the propeptide-processing enzyme PACE improved factor IX activity threefold. Thus, the cited work supports an improvement through cell engineering, but not an improvement in gamma-carboxylation of the secreted clotting factor. (LLM, conf=0.84)
Experimental — accuracy not yet measured - cites Liu et al., 2014 source
- Premisecitation
CHO cells produce glycans that do not occur in human cells, namely Neu5Gc and α-gal, at very low levels (<2% and <0.2% respectively).
“Moreover, CHO cells produce glycans that do not occur in human cells, namely N-glycolylneuraminic acid (Neu5Gc) and galactose-α1,3-galactose (α-gal), even though these occurring at very low levels (e.g < 2% and < 0.2% respectively) (Bosques et al., 2010;Ghaderi et al., 2010;Dietmair et al., 2012b;Ghaderi et al., 2012).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites Bosques et al., 2010 source
In “To the Editor” (page unavailable), the paper shows that CHO-produced proteins can contain α-Gal and reports an α-Gal–containing glycan in abatacept at approximately 0.2% of total N-linked glycans. That is a product-specific estimate, not a general level below 0.2%. Our copy does not address Neu5Gc or its claimed level below 2%, nor does it explicitly state that these glycans do not occur in human cells. (LLM, conf=0.87)
Experimental — accuracy not yet measured - cites Ghaderi et al., 2010 source
The paper states that humans cannot synthesize α-gal or Neu5Gc and that glycoproteins produced in CHO cells carry small amounts of Neu5Gc (body text, indexed under Abstract; page unavailable). It does not establish α-gal production specifically in CHO cells or give the claimed <2% and <0.2% levels. It also notes that human cells can incorporate Neu5Gc from animal-derived culture materials, so ‘do not occur in human cells’ is too absolute. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites Dietmair et al., 2012b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
Co-expression of furin allowed the production of fully cleaved and active von Willebrand factor in an industrial-scale CHO perfusion system.
“For example, co-expression of furin was shown to allow the production of fully cleaved and active von Willebrand factor in an industrial-scale CHO perfusion system (Fischer et al., 1995)”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Fischer et al., 1995 source
The Expression section describes furin-coexpressing CHO cells grown in industrial-scale perfusion bioreactors. The structural analysis (section labeled Preparation; page unavailable) reports that the resulting vWF was completely processed and composed of intact, mature subunits. It identifies multimers associated with hemostatic activity but does not demonstrate the produced vWF’s activity with a functional test. (LLM, conf=0.85)
Experimental — accuracy not yet measured
- Premisecitation
ACE technology was shown to be effective for establishing CHO cell lines producing respectable titers of monoclonal antibody.
“It was shown to be effective for establishing CHO cell lines producing respectable titers of monoclonal antibody (Lindenbaum et al., 2004;Kennard et al., 2009;Kennard 2011).”
Quote in the paperNot a substantial claim1 of 3 sources checked - Premisecitation
Murine myeloma cells (NS0 and Sp2/0) are used to produce commercial monoclonal antibodies such as Cetuximab and Palivizumab.
“Murine myeloma cells (NS0 and Sp2/0), derived from tumor cells that no longer produce their original immunoglobulins, also are being used to produce some commercial monoclonal antibodies such as Cetuximab (ERBITUX ® ) and Palivizumab (SYNAGIS ® ) (Barnes et al., 2000;Dumont et al., 2015).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites Barnes et al., 2000 source
The ‘Products generated using the GS-NS0 system’ section identifies Synagis (palivizumab) as a marketed monoclonal antibody produced using the GS-NS0 system. The ‘NS0 cell history’ section also describes NS0 as a non-secreting murine myeloma line. Our copy does not identify Sp2/0 or Cetuximab, so it does not support those parts of the attributed claim. (LLM, conf=0.89)
Experimental — accuracy not yet measured - cites Dumont et al., 2015 source
- Premisecitation
The DHFR selection uses CHO cell mutants deficient for DHFR.
“Similarly, the DHFR selection uses the fact that CHO cell mutants have been selected to be deficient for DHFR (Urlaub and Chasin, 1980).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Urlaub and Chasin, 1980 source
- Premisecitation
These nucleases induce DNA double-strand breaks at precise locations in the host genome, facilitating integration of the cassette by non-homologous end-joining (NHEJ) or homology-directed repair (HDR).
“These nucleases induce DNA double-strand breaks at precise locations into the host genome, facilitating the integration of the cassette by non-homologous end-joining (NHEJ) or homology-directed repair (HDR) (Gaj et al., 2013).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Gaj et al., 2013 source
- Premisecitation
Only two marketed recombinant glycoproteins are currently manufactured in BHK cells, Factor VIIa and Factor VIII.
“Only two marketed recombinant glycoproteins are currently manufactured in these cells, Factor VIIa (NovoSeven ® ) and Factor VIII (Kogenate ® and Kovaltry ® ), which are other clotting factors (Durocher and Butler, 2009;Dumont et al., 2015).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Durocher and Butler, 2009 source
- cites Dumont et al., 2015 source
The non-human expression systems section lists NovoSeven and Kogenate among product references and defines BHK as baby hamster kidney, but the passages retrieved do not link either product to BHK manufacture or establish that only two marketed glycoproteins use those cells. The references to Kogenate and the comparison of factor VIII expression with BHK21 cells also do not establish the marketed-product claim. Searches for BHK, both factor names, and the product names did not settle it. (LLM, conf=0.68)
Experimental — accuracy not yet measured
- Premisecitation
Insect cells produce N-glycan precursors that are trimmed, creating high mannose or paucimannose structures.
“Insect cells produce N-glycan precursors that are trimmed, creating high mannose or paucimannose structures (Kost et al., 2005).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Kost et al., 2005 source
- Premisecitation
Murine cells can produce α-gal and Neu5Gc at considerably higher levels than hamster cells, increasing the risks of immunogenicity.
“Murine cells can also produce α-gal and Neu5Gc at considerably higher levels than hamster cells, increasing the risks of immunogenicity (Tangvoranuntakul et al., 2003;Chung et al., 2008;Macher and Galili, 2008;Padler-Karavani et al., 2008;Ghaderi et al., 2012).”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites Tangvoranuntakul et al., 2003 source
- cites Chung et al., 2008 source
Evaluation of Antigens says mouse-cell-produced cetuximab differs in glycosylation from its Chinese hamster ovary (CHO)-produced variant because CHO cells lack α-1,3-galactosyltransferase. Characterization of the Epitope on Cetuximab identifies both α-gal and N-glycolylneuraminic acid (Neu5Gc) on cetuximab, while the Discussion links α-gal-specific IgE to severe hypersensitivity reactions. The paper does not establish that murine cells produce both sugars at considerably higher levels than hamster cells or that Neu5Gc increases immunogenicity. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites Macher and Galili, 2008 source
- Premisecitation
SRP14 enhanced productivity of recombinant IgG in CHO cells when overexpressed.
“Likewise, signal recognition particle 14 (SRP14), which targets secreted proteins to the endoplasmic reticulum membrane, enhanced productivity of recombinant IgG in CHO cells when overexpressed (Lakkaraju et al., 2008;Le Fourn et al., 2014).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites Lakkaraju et al., 2008 source
The section ‘Elongation arrest-defective SRP impairs the accumulation of membrane and secreted proteins’ (page unavailable) shows that functional SRP14 is important for secretion: restoring it in depleted 293T cells restored normal SEAP secretion. The paper does not report SRP14 overexpression increasing recombinant IgG productivity in CHO cells; searches for CHO cells, IgG, and overexpression found no such result. (LLM, conf=0.87)
Experimental — accuracy not yet measured - cites Le Fourn et al., 2014 source
- Premisecitation
The same effect of afucosylated Fc domain glycans enhancing FcγRIIIa binding was observed for human IgG4.
“Recently, the same effect was observed for human IgG4 (Gong et al., 2016).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Gong et al., 2016 source
- Interpretationcitation
Because most epigenetic elements are composed of nucleosome depleted regions, they could contribute to inhibiting the propagation of an inactive chromatin state surrounding the transgene, serving as genetic boundaries.
“Since most of these elements are composed of nucleosome depleted regions, this could also contribute to the inhibition of the propagation of an inactive chromatin state surrounding the transgene, serving as genetic boundaries (Arope et al., 2013;Harraghy et al., 2015).”
Quote in the paperSubstantial claim1 of 2 sources checked- cites Arope et al., 2013 source
The Discussion (page not provided) proposes that nucleosome depletion over MARs can block heterochromatin propagation and protect adjacent transgenes from silencing. It does not establish that most epigenetic elements have nucleosome-depleted regions; its evidence and proposed mechanism concern MARs and promoters. (LLM, conf=0.84)
Experimental — accuracy not yet measured - cites Harraghy et al., 2015 source
- Premisecitation
Successful apoptosis inhibition was also achieved by overexpression of other related anti-apoptotic proteins.
“Successful apoptosis inhibition was also achieved by overexpression of other related anti-apoptotic proteins (Durocher and Butler, 2009;Bandaranayake and Almo, 2014).”
Quote in the paperNot a substantial claim1 of 2 sources checked - Premisecitation
This increased affinity allows better therapeutic activity of Mabs used in cancer therapy, by triggering the antibody-dependent-cell-mediated cytotoxicity (ADCC) pathway.
“This increased affinity allows better therapeutic activity of Mabs used in cancer therapy, by triggering the antibody-dependent-cell-mediated cytotoxicity (ADCC) pathway (Niwa et al., 2005;Iida et al., 2006;Chung et al., 2012).”
Quote in the paperSubstantial claim2 of 3 sources checked- cites Niwa et al., 2005 source
- cites Iida et al., 2006 source
The Introduction (page not available) links higher FcγRIIIa affinity with a superior clinical response to rituximab, and the Discussion reports that improved FcγRIIIa binding enhances ADCC. However, this paper’s test of nonfucosylated antibodies used a human ex vivo model; it supports improved ADCC and therapeutic potential, not established better therapeutic activity in cancer patients. (LLM, conf=0.82)
Experimental — accuracy not yet measured - cites Chung et al., 2012 source
The ADCC assay section reports that increased FcγRIIIa binding appeared to produce a proportional increase in ADCC activity. The Discussion also reports better responses to cancer antibodies in patients with a higher-affinity receptor variant. But the paper does not establish that increasing an antibody’s affinity itself improves clinical therapeutic outcomes; its direct antibody findings concern binding and ADCC assays. (LLM, conf=0.84)
Experimental — accuracy not yet measured
- Premisecitation
UCOEs were found to be helpful for increasing the productivity of recombinant protein cell lines.
“UCOEs were also found to be helpful for increasing the productivity of recombinant protein cell lines (Benton et al., 2002;She et al., 2009).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites Benton et al., 2002 source
- cites She et al., 2009 source
The Results and Discussion section on ultraconserved elements discusses UCEs and their enrichment in housekeeping genes, not UCOEs. Searches for UCOEs and recombinant-protein cell-line productivity found no passage in our copy addressing the claimed benefit. (LLM, conf=0.78)
Experimental — accuracy not yet measured
- Premisecitation
Inclusion of epigenetic elements can help increase the expression level of biotherapeutics.
“Inclusion of these various epigenetic elements not only can help to increase the expression level of biotherapeutics, but can also increase the number of clones that have integrated the transgene with a more defined copy number of transgene per cell, thus accelerating the selection process (Grandjean et al., 2011;Harraghy et al., 2015).”
Quote in the paperSubstantial claim1 of 2 sources checked - Premisecitation
Both ZFN and CRISPR/Cas9 approaches were also used for FUT8 gene-specific knockout.
“Recently, both ZFN and a CRISPR/Cas9 approaches were also used for FUT8 gene-specific knockout (Malphettes et al., 2010;Ronda et al., 2014).”
Quote in the paperNot a substantial claim2 of 2 sources checked - Premisecitation
PDI overexpression has shown positive results on productivity in the case of monoclonal antibodies in both CHO cells and NS0 cells.
“Its overexpression has shown positive results on productivity in the case of monoclonal antibodies in both CHO cells and NS0 cells (Smales et al., 2004;Mohan et al., 2007).”
Quote in the paperNot a substantial claim1 of 2 sources checked - Premisecitation
Inclusion of epigenetic elements can increase the number of clones that have integrated the transgene with a more defined copy number of transgene per cell, thus accelerating the selection process.
“Inclusion of these various epigenetic elements not only can help to increase the expression level of biotherapeutics, but can also increase the number of clones that have integrated the transgene with a more defined copy number of transgene per cell, thus accelerating the selection process (Grandjean et al., 2011;Harraghy et al., 2015).”
Quote in the paperSubstantial claim1 of 2 sources checked- cites Grandjean et al., 2011 source
The Results section, “MAR elements increase the copy number of genome-integrated transgenes” (page not available), reports increased integration and higher copy numbers in CHO cell pools and individual clones with MAR-containing plasmids. It does not establish that more clones have a more defined copy number per cell or that clone selection is accelerated. (LLM, conf=0.84)
Experimental — accuracy not yet measured - cites Harraghy et al., 2015 source
- Premisecitation
CDKL3 gene insertion accelerates cell proliferation of 293 and CHO cells.
“The CDKL3 gene insertion also accelerates cell proliferation of 293 and CHO cells (Jaluria et al., 2007).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Jaluria et al., 2007 source
- Premisecitation
Disruption of the fucosyltransferase in these cell lines completely abolished the fucosylation on the Fc domain of IgG.
“Disruption of the fucosyltransferase in these cell lines completely abolished the fucosylation on the Fc domain of IgG.”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites Malphettes et al., 2010 source
- cites Ronda et al., 2014 source
The Results section (‘Homozygous Knockout of FUT8 in CHO Cells Generated by CRISPR’; page unavailable) identifies FUT8 as the enzyme that adds fucose to CHO-produced IgG1 and reports FUT8 disruption. But its measurements concern cell-surface fucose and FUT8 indels, not fucosylation of the IgG Fc domain; moreover, 98.6% of selected cells, not all cells, were lectin-negative. It does not establish complete abolition of IgG Fc fucosylation in these cells. (LLM, conf=0.86)
Experimental — accuracy not yet measured
- Premisecitation
A technique called GlycoDelete engineering was recently developed in HEK293S cells.
“Furthermore, to improve N-glycan homogeneity on therapeutic proteins, a technique called “GlycoDelete” engineering was also recently developed in HEK293S cells (Meuris et al., 2014).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Meuris et al., 2014 source
- Premisecitation
The publication of the CHO-K1 genome sequence in 2011, followed by the publication of two Chinese hamster and six CHO cell line genomes in 2013, bring new opportunities in developing and engineering CHO cells for improved glycoprotein production.
“The publication of the CHO-K1 genome sequence in 2011, followed by the publication of two Chinese hamster and six CHO cell line genomes in 2013, bring new opportunities in developing and engineering CHO cells for improved glycoprotein production (Xu et al., 2011;Brinkrolf et al., 2013;Lewis et al., 2013).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites Xu et al., 2011
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Brinkrolf et al., 2013 source
Split into 2 atoms — 0 confirmed, 2 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.
Experimental — accuracy not yet measured - cites Lewis et al., 2013 source
- Premisecitation
Co-expression of ST6Gal1 and β4GalT1 in CHO cells also significantly enhanced the sialylation level of the mutated version of trastuzumab.
“Co-expression of ST6Gal1 and β4GalT1 in CHO cells also significantly enhanced the sialylation level of the mutated version of trastuzumab (Raymond et al., 2015).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Raymond et al., 2015 source
- Premisecitation
Transient expression of ST6Gal1 in CHO and HEK293 cells also increased the α2,6 sialylation of a trastuzumab F243A mutant antibody.
“Transient expression of ST6Gal1 in CHO and HEK293 cells also increased the α2,6 sialylation of a trastuzumab F243A mutant antibody (Raymond et al., 2012).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Raymond et al., 2012 source
Section 4 describes transient coexpression of ST6Gal-I with trastuzumab in CHO and HEK293 cells, and the section on ST6Gal-I overexpression reports increased α2,6-sialylation of the mutant antibody. However, the trastuzumab mutant studied is F246A; the paper says it is equivalent to a previously described IgG3 F243A mutant, not that trastuzumab itself has the F243A mutation. (LLM, conf=0.90)
Experimental — accuracy not yet measured
- Premisecitation
The ST6Gal1 gene of the Chinese hamster was also recently used in stable expression of different CHO cell lines producing recombinant IgGs.
“As genome-editing strategies, the ST6Gal1 gene of the Chinese hamster was also recently used in stable expression of different CHO cell lines producing recombinant IgGs (Lin et al., 2015).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Lin et al., 2015 source
- Premisecitation
A Pichia pastoris yeast strain was engineered to generate human-like glycans but devoid of core-fucose.
“For example, a Pichia pastoris yeast strain was engineered to generate human-like glycans but devoid of core-fucose (Choi et al., 2003;Hamilton et al., 2006;Hamilton and Gerngross 2007).”
Quote in the paperNot a substantial claim1 of 3 sources checked - Premisecitation
This multidimensional study also resolved the codon frequency in these cells, which largely contributed to sequence optimization of genes encoding recombinant proteins for this expression system.
“This multidimensional study also resolved the codon frequency in these cells, which largely contributed to sequence optimization of genes encoding recombinant proteins for this expression system.”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Baycin-Hizal et al., 2012 source
The Results (Codon Frequency) report CHO codon frequencies and compare them with human codon frequencies, then suggest replacing suboptimal codons when producing recombinant proteins. The Discussion likewise describes codon optimization as relevant to improving expression, but neither section establishes that this study largely contributed to actual gene-sequence optimization. (LLM, conf=0.85)
Experimental — accuracy not yet measured
- Interpretationcitation
The decreased susceptibility of CHO cells to human viruses could be attributed to many viral entry genes not being expressed in CHO cells.
“This decreased susceptibility could be attributed to the fact that many viral entry genes are not expressed in CHO cells (Xu et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Xu et al., 2011
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationreasoning
The trend toward mammalian expression platforms is mostly driven by increased attention to posttranslational modifications, in particular glycosylation state.
“This trend is mostly driven by the increased attention directed to posttranslational modifications of these biologics, in particular towards their glycosylation state.”
Quote in the paperSubstantial claim - Interpretationnone given
Proteins requiring proteolytic processing for maturation may not always be fully cleaved and active when expressed in CHO cells.
“Proteins requiring proteolytic processing for maturation may not always be fully cleaved and active when expressed in CHO.”
Quote in the paperNot a substantial claim - Premisecitation
Among mammalian-based expression systems, CHO cells are by far the most commonly used cell line.
“Among the mammalian-based expression systems, CHO cells is by far, the most commonly used cell line.”
Quote in the paperSubstantial claim0 of 3 sources checked - Premisecitation
Co-expression of proprotein convertases allowed efficient maturation of human bone morphogenetic protein-7.
“Similarly, co-expression of proprotein convertases allowed for the efficient maturation of human bone morphogenetic protein-7 (Sathyamurthy et al., 2015).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Sathyamurthy et al., 2015 source
- Premisecitation
CHO cells are unable to produce some types of human glycosylation, such as α-2,6-sialylation and α-1,3/4-fucosylation.
“Although CHO cells possess many advantages for glycoprotein productions, they are unable to produce some types of human glycosylation, such as α-2,6-sialylation and α-1,3/4-fucosylation (Patnaik and Stanley, 2006).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Patnaik and Stanley, 2006 source
- Premisecitation
The most commonly used human cell lines to manufacture glycoprotein therapeutics are HEK293 and HT-1080.
“The most commonly used human cell lines to manufacture glycoprotein therapeutics are the HEK293 cells and the HT-1080, respectively from human embryo kidney and fibrosarcoma origin (Rasheed et al., 1974;Graham et al., 1977).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Premisecitation
The ZFN knockout approach was particularly successful for specific deletion of the GS and DHFR genes in CHO cells, thus improving selection stringency of generated cell lines.
“The ZFN knockout approach was particularly successful for specific deletion of the GS and the DHFR genes in CHO cells, thus improving the selection stringency of the generated cell lines (Liu et al., 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Liu et al., 2010 source
- Premisecitation
Including MAR elements in expression vectors for recombinant proteins could significantly improve expression levels.
“Many reports have shown that including these MAR elements in expression vectors for recombinant proteins could significantly improve the expression levels (for an extensive review see (Harraghy et al., 2015)).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Harraghy et al., 2015 source
- Premisecitation
The PiggyBac approach has recently shown improved yields for stable production of antibodies in CHO cell lines.
“This approach has recently shown improved yields for stable production of antibodies in CHO cell lines (Rajendra et al., 2016).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Rajendra et al., 2016 source
- Premisecitation
When the need for a quick and economical approach prevails, transient expression remains the best choice for protein production.
“When the need for a quick and economical approach prevails, transient expression remains the best choice for protein production (Rosser et al., 2005;Pham et al., 2006;Geisse, 2009;Chahal et al., 2011;Baldi et al., 2012).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Fed-batch performance and stability of ACE vs random integration systems have been compared for IgG1 expression in CHO cells and have shown similar performance.
“Fed-batch performance and stability of ACE vs random integration systems have been compared for IgG1 expression in CHO cells and have shown similar performance (Combs et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Combs et al., 2011 source
- Interpretationreasoning
Despite the success of selection systems, a main problem persists: they are based on random plasmid integration and its expression cassette in the host genome.
“Despite the success of the selection systems described above, a main problem persists with these methods, being the fact that they are based on random plasmid integration and its expression cassette in the host genome.”
Quote in the paperSubstantial claim - Interpretationreasoning
Screening a very large number of clones (generally multiple hundreds to a few thousands) is implied to find rare clones with stably integrated plasmid in highly transcriptionally active chromatin regions ('hotspots').
“This implies screening a very large number of clones (generally multiple hundreds to a few thousands, depending on the cloning method used) in order to find those rare ones with stably integrated plasmid in highly transcriptionally active chromatin regions (”
Quote in the paperSubstantial claim - Interpretationnone given
Copy number of integrated plasmid and integration site(s) within the host genome are key factors for stable gene expression.
“Copy number of integrated plasmid as well as the integration site(s) within the host genome are some of the key factors when it comes to stable gene expression.”
Quote in the paperNot a substantial claim - Premisecitation
PER.C6 cells are able to produce high titers of IgG without requiring amplification of the incorporated gene.
“These cells are able to produce high titers of IgG without requiring amplification of the incorporated gene (Jones et al., 2003).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Jones et al., 2003 source
- Premisecitation
By skipping the lengthy selection process for cells that have integrated the plasmid within their genome, transient transfection is much faster.
“By skipping the lengthy selection process for the cells that have integrated the plasmid within their genome, transient transfection is much faster (Rita Costa et al., 2010).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Rita Costa et al., 2010 source
- Interpretationreasoning
Transgenes are likely to be inserted in heterochromatin regions, resulting in very weak gene expression levels.
“Transgenes are likely to be inserted in heterochromatin regions, which results in very weak gene expression levels.”
Quote in the paperSubstantial claim - Interpretationreasoning
Random integration creates very heterogeneous cell populations with variable expression levels amongst clones.
“This random integration creates very heterogeneous cell population that have variable expression levels amongst the different clones.”
Quote in the paperSubstantial claim - Interpretationcitation
One key challenge is still to identify good hotspots in the host genome that will allow good expression levels and stability.
“Even if these tools could prove very useful for site specific integration, one of the key challenges is still to identify good hotspots in the host genome that will allow good expression levels and stability (Zhang et al., 2015).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Zhang et al., 2015 source
- Premisecitation
For stable expression, a gene marker is usually integrated in the expression plasmid along with the cDNA encoding the gene of interest, conferring a selective advantage to cells that integrate the plasmid into their genome.
“For stable expression, a gene marker is usually integrated in the expression plasmid along with the cDNA encoding the gene of interest, conferring a selective advantage to the cells that integrate the plasmid into their genome (Rita Costa et al., 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Rita Costa et al., 2010 source
- Premisecitation
The GS selection system uses complementation of a glutamine auxotrophy by a recombinant GS gene.
“The first one, originally developed by Celltech (now Lonza Biologics), uses complementation of a glutamine auxotrophy by a recombinant GS gene (Fan et al., 2013).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Fan et al., 2013 source
- Premisecitation
The production rate in transient transfection relies on many factors including efficiency of the transfection phase, cytotoxicity of the transfection reagent, and extensiveness of the feeding strategy applied post-transfection.
“However, the production rate relies on many factors including efficiency of the transfection phase, cytotoxicity of the transfection reagent and extensiveness of the feeding strategy applied to the culture post-transfection (Pham et al., 2006;Daramola et al., 2014).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Interpretationnone given
Non-mammalian organisms do not have the ability to adequately glycosylate recombinant proteins due to the absence of the required enzymatic machinery.
“However, these organisms do not have the ability to adequately glycosylate recombinant proteins, due to the absence of the required enzymatic machinery.”
Quote in the paperSubstantial claim - Premisecitation
Transgenic animals often produce different glycosylation patterns compared to native human proteins.
“As with other mammalian expression systems, transgenic animals often produce different glycosylation pattern compared to native human proteins (Durocher and Butler, 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Durocher and Butler, 2009 source
- Interpretationreasoning
Non-mammalian expression systems are mainly limited to the expression of nonglycosylated proteins.
“These systems are thus mainly limited to the expression of nonglycosylated proteins.”
Quote in the paperSubstantial claim - Premisecitation
Overexpression of the CERT S132A mutant improved production of t-PA, human serum albumin and monoclonal antibodies in industrial cell lines.
“Similarly, overexpression of ceramidetransfer protein (CERT) S132A mutant, which is responsible for the transfer of ceramide from the ER to the Golgi and for sphingomyelin synthesis, also improved production of t-PA, human serum albumin and monoclonal antibodies in industrial cell lines (Florin et al., 2009;Rahimpour et al., 2013).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Premisecitation
Addition of sodium butyrate (NaB) and valproic acid (VPA) has resulted in increased productivity in numerous studies, especially in CHO cells.
“Addition of these chemicals has resulted in increased productivity in numerous studies, especially in CHO cells (Durocher and Butler, 2009;Yang et al., 2014).”
Quote in the paperNot a substantial claim0 of 2 sources checked- Rests on an assumption: Histone deacetylase inhibitors preserve histone acetylation, reduce their interaction with DNA, and help maintain chromatin in an open configuration, leading to enhanced or prolonged transgene transcription.
- Premisecitation
Other studies observed either a negative or no effect on productivity with PDI overexpression.
“However, other studies observed either a negative or no effect on productivity (Mohan et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Mohan et al., 2008 source
- Premisecitation
Some reports have revealed positive effects in overexpressing XBP-1, a transcription factor regulating the unfolded protein response during ER stress.
“Some reports have revealed positive effects in overexpressing XBP-1 (X-box binding protein 1), a transcription factor regulating the unfolded protein response (UPR) during ER stress (Iwakoshi et al., 2003;Tigges and Fussenegger, 2006;Becker et al., 2008;Ku et al., 2008).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Overexpression of the Hsp27 and Hsp70 chaperones in CHO cells also increased recombinant IFNγ production.
“Overexpression of the Hsp27 and Hsp70 chaperones in CHO cells also increased recombinant IFNγ production (Lee et al., 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Lee et al., 2009 source
- Premisecitation
The BiP chaperone gave mixed results, with enhanced or decreased productivity.
“Similarly, the heavy chain-binding protein (BiP) chaperone gave mixed results, with enhanced or decreased productivity (Mohan et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Mohan et al., 2008 source
- Premisecitation
There were no obvious benefits observed in stable CHO-K1 cells expressing IFNy, EPO or a human mAb when overexpressing XBP-1.
“However there were no obvious benefit observed in stable CHO-K1 cells expressing IFNy, EPO or a human mAb (Ku et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Ku et al., 2008
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
Chaperones have been employed by many groups as cell engineering tools but have given variable results.
“They have been employed by many groups as cell engineering tools but have given variable results (Mohan et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Mohan et al., 2008 source
- Rests on an assumption: Chaperones play a key role in the folding process of nascent proteins.
- Interpretationnone given
Most anti-autophagy and metabolic engineering strategies still need to prove their effectiveness and robustness for increasing recombinant protein production in mammalian cells, especially at an industrial level.
“Yet, most of these strategies still need to prove their effectiveness and robustness for increasing recombinant protein production in mammalian cells, especially at an industrial level.”
Quote in the paperNot a substantial claim - Interpretationcitation
The various and sometimes contradictory results of chaperone and ER protein engineering could be partly explained by the use of different CHO host strains.
“Thus, these various and sometimes contradictory results could be partly explained by the use of different CHO host strains.”
Quote in the paperSubstantial claim - Premisecitation
Use of histone deacetylase inhibitors such as NaB and VPA may also have undesired secondary effects, such as blocking cell cycle or inducing apoptosis.
“However, the use of these inhibitors may also have undesired secondary effects, such as blocking cell cycle or inducing apoptosis (Sung et al., 2004;Jiang and Sharfstein, 2008;Sunley and Butler, 2010).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Overexpression of ERp57 together with calnexin/calreticulin was able to increase thrombopoietin production in CHO cells.
“Moreover, overexpression of the endoplasmic-reticulum ERp57 protein, an isoform of PDI, together with calnexin/calreticulin was able to increase thrombopoietin production in CHO cells (Mohan et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Mohan et al., 2008 source
- Premisecitation
Expression of SNAP-23 and VAMP8 has been shown to improve production of SEAP and monoclonal antibodies in CHO-K1 cells.
“For example, by controlling vesicle docking and fusion, expression of SNAP-23 and VAMP8 has been shown to improve production of SEAP and monoclonal antibodies in CHO-K1 cells (Peng et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Peng et al., 2011 source
- Premisecitation
GADD34 can also be overexpressed in order to increase productivity of CHO cells.
“Similarly, GADD34 can also be overexpressed in order to increase productivity of CHO cells (Omasa et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Omasa et al., 2008 source
- Premisecitation
Development of bioinformatic tools capable to predict the outcome of MAR sequences helped to improve MAR elements.
“In recent years, development of bioinformatic tools capable to predict the outcome of MAR sequences helped to improve MAR elements (Girod et al., 2007;Harraghy et al., 2012Harraghy et al., , 2015)).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Genes of the Bcl-2 family (Bcl-2, Bcl-xL and Mcl-1) were overexpressed in a variety of CHO cell lines.
“As for anti-apoptosis engineering, genes of the Bcl-2 family (Bcl-2, Bcl-xL and Mcl-1) were overexpressed in a variety of CHO cell lines (Kim and Lee, 2000;Tey et al., 2000;Meents et al., 2002;Chiang and Sisk, 2005;Kim et al., 2009b;Majors et al., 2009).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Afucosylated Fc domain glycans of human IgG1 could enhance the binding to FcγRIIIa subtype receptors of natural killer cells.
“It was reported that afucosylated Fc domain glycans of human IgG1 could enhance the binding to FcγRIIIa subtype receptors of natural killer cells (Shields et al., 2002;Shinkawa et al., 2003;Niwa et al., 2005;Iida et al., 2006;Subedi and Barb, 2016).”
Quote in the paperSubstantial claim0 of 3 sources checked - Premisecitation
Anti-autophagy engineering and metabolic engineering have been used in order to optimize recombinant protein production in mammalian cells.
“Among these approaches, anti-autophagy engineering and metabolic engineering have been used in order to optimize recombinant protein production in mammalian cells (for a detailed review on the topic see (Kim et al., 2012;Kim et al., 2013)).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Premisecitation
Down-regulation of pro-apoptotic genes like Bax, Bak, microRNA mir-mmu-miR-466h-5p and caspase-3,-7,-8 and -9 were also tested.
“Oppositely, down-regulation of pro-apoptotic genes like Bax, Bak, microRNA mir-mmu-miR-466h-5p and caspase-3,-7,-8 and -9 were also tested (Kim and Lee, 2002;Sung et al., 2007;Yun et al., 2007;Cost et al., 2010;Druz et al., 2013).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Premisecitation
Numerous small molecules have been identified from a chemical library that could enhance protein production.
“Beside media and feeds, numerous small molecules have been identified from a chemical library that could enhance protein production (Allen et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Allen et al., 2008 source
- Premisecitation
Introduction of the mTOR gene in CHO cells resulted in increased cell proliferation and productivity of therapeutic IgG, alkaline phosphatase and α-amylase.
“The introduction of the mTOR gene in CHO cells resulted in increased cell proliferation and productivity of therapeutic IgG, alkaline phosphatase and α-amylase (Dreesen and Fussenegger, 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Dreesen and Fussenegger, 2011 source
- Premisecitation
Chemical manipulation of the mTOR pathway can also enhance glycoprotein productions in CHO cells.
“Moreover, chemical manipulation of this pathway can also enhance glycoprotein productions in these cells (Dadehbeigi and Dickson, 2015).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Dadehbeigi and Dickson, 2015 source
- Premisereasoning
Plants, yeasts and non-human cell lines can generate glycans that are often absent from endogenous human proteins.
“Plants, yeasts and non-human cell lines can generate glycans that are often absent from endogenous human proteins (see section 2).”
Quote in the paperSubstantial claim - Premisecitation
Optimization of the addition timing and concentration of histone deacetylase inhibitors has shown to be important to attenuate their undesired effects.
“To attenuate these effects, optimization of the addition timing and concentration has shown to be important (Rodriguez et al., 2005).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Rodriguez et al., 2005 source
- Premisecitation
Some attempts of knocking down the different CHO sialidases by shRNA or siRNA also improved the sialylation level of recombinant hIFNγ, particularly for Neu2 and Neu3 sialidases.
“Some attempts of knocking down the different CHO sialidases by shRNA or siRNA also improved the sialylation level of recombinant hIFNγ, particularly for Neu2 and Neu3 sialidases (Ngantung et al., 2006;Zhang et al., 2010b).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Ngantung et al., 2006 source
- cites Zhang et al., 2010b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
A human ST6Gal1 knock-in experiment in ST3Gal4/6 knockout CHO cells resulted in considerable increase of α2,6 sialylation.
“Additionally, the same study presented a human ST6Gal1 knock-in experiment in ST3Gal4/6 knockout CHO cells, which resulted in considerable increase of α2,6 sialylation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Yang et al., 2015 source
- Premisecitation
Comparison of proteomic profiles of fast vs slow growing CHO clones has already identified the valosin-containing protein (VCP) as a potential candidate for enhancement of cell growth by cell engineering.
“Indeed, comparison of proteomic profiles of fast vs slow growing CHO clones has already identified the valosin-containing protein (VCP) as a potential candidate for enhancement of cell growth by cell engineering (Doolan et al., 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Doolan et al., 2010 source
- Premisecitation
The C12orf35 gene comprised within this region seems to be responsible for the phenotype.
“The C12orf35 gene comprised within this region seems to be responsible for the phenotype (Ritter et al., 2016a).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Ritter et al., 2016a
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
Heterologous expression of the bacterial enzyme GDP-4-dehydro-6deoxy-D-mannose reductase (RMD) in CHO cells strongly reduced their fucosylation capacity.
“Heterologous expression of the bacterial enzyme GDP-4-dehydro-6deoxy-D-mannose reductase (RMD) in CHO cells strongly reduced their fucosylation capacity (von Horsten et al., 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites von Horsten et al., 2010 source
- Premisecitation
Sequencing of the CHO-K1 genome allowed the identification and positioning of their genes and of most human glycosylation-associated transcripts.
“Sequencing of the CHO-K1 genome allowed the identification and positioning of their genes and of most of human glycosylation-associated transcripts (Xu et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Xu et al., 2011
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
Higher recombinant protein production was obtained when overexpressing the miR-7 gene in CHO cells.
“Higher recombinant protein production was obtained when overexpressing the miR-7 gene in CHO cells (Barron et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Barron et al., 2011 source
- Premisecitation
A CHO cell line stably expressing both 30Kc19 and human EPO showed that it could also significantly increase the EPO sialylation.
“A CHO cell line stably expressing both 30Kc19 and human EPO showed that it could also significantly increase the EPO sialylation (Wang et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Wang et al., 2011 source
- Premisecitation
Enhanced expression of ST3GalII, ST3GalIV and ST6Gal1 could enhance sialylation in HEK293, Cos-7, 3T3 and NSO cells.
“A functional analysis of 31 glycosyltransferases was even conduced for human EPO glycosylation optimization in six different mammalian cell lines, where enhanced expression of ST3GalII, ST3GalIV and ST6Gal1 could enhance sialylation in HEK293, Cos-7, 3T3 and NSO cells (Zhang et al., 2010c).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Zhang et al., 2010c
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
The silkworm hemolymph antiapoptotic protein 30Kc19 was shown to increase protein production.
“As mentioned earlier, the silkworm hemolymph antiapoptotic protein 30Kc19 was shown to increase protein production (Wang et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Wang et al., 2011 source
- Premisecitation
A multi-omics study combining transcriptomics and metabolomics data identified variations in gene expression and in enzymatic reactions during the transition from a parental HEK293 cell line to a producer cell line.
“Finally, a multi-omics study combining transcriptomics and metabolo-mics data, identified variations in gene expression and in enzymatic reactions during the transition from a parental HEK293 cell line to a producer cell line (Dietmair et al., 2012b).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Dietmair et al., 2012b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
CHO cells where simultaneous disruption of FUT8, BAX and BAK gene by CRISPR/Cas9 was achieved and confirmed by deep sequencing showed increased resistance to apoptosis.
“As an example, CHO cells, where simultaneous disruption of FUT8, BAX and BAK gene by CRISP/Cas9 was achieved and confirmed by deep sequencing, showed increased resistance to apoptosis (Grav et al., 2015).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Grav et al., 2015 source
- Premisecitation
CHO cell lines producing recombinant IgG were also found to have decreased expression of miR-221 and miR-222 compared to their parental cell line DG44.
“CHO cell lines producing recombinant IgG were also found to have decreased expression of miR-221 and miR-222 compared to their parental cell line DG44 (Lin et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Lin et al., 2011 source
- Premisecitation
An engineered CHO cell line stably expressing the human α2,3-sialyltransferase ST3Gal3, the rat mutated GNE/MNK-R263L-R266Q glycosylation enzymes and the Chinese hamster CMP-sialic acid transporter was successful in increasing tetra-sialylation of recombinant human EPO.
“An engineered CHO cell line stably expressing the human α2,3-sialyltransferase ST3Gal3, the rat mutated GNE/MNK-R263L-R266Q glycosylation enzymes and the Chinese hamster CMP-sialic acid transporter was successful in increasing tetra-sialylation of recombinant human EPO (Son et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Son et al., 2011 source
- Interpretationreasoning
Increasing the sialylation of proteins may decrease the frequency of injection or the amount of therapeutic protein used in a single dose.
“Thus, increasing the sialylation of proteins may decrease the frequency of injection or the amount of therapeutic protein used in a single dose.”
Quote in the paperSubstantial claim- Rests on an assumption: Addition of terminal sialic acids on the glycans of protein therapeutics helps to maintain them into the blood circulation by preventing their recognition by the asialoglycoprotein receptors highly expressed in liver hepatocytes.
- Premisecitation
Transient transfection of the Chinese hamster ST6Gal1 gene in CHO cells expressing a bispecific antibody also considerably increased the level of α2,6 sialylation.
“Finally, transient transfection of the Chinese hamster ST6Gal1 gene in CHO cells expressing a bispecific antibody, also considerably increased the level of α2,6 sialylation (Onitsuka et al., 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Onitsuka et al., 2012 source
- Premisecitation
Knockout of both ST3gal4 and ST3gal6 genes affected sialylation.
“Noteworthy, knockout of both ST3gal4 and ST3gal6 genes affected sialylation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Yang et al., 2015 source
- Premisecitation
Comparison of gene expression profiles between high and low producing CHO clones allowed the identification of a deletion in chromosome 8 telomeric region of the cells correlating with higher productivity.
“Comparison of gene expression profiles between high and low producing CHO clones allowed the identification of a deletion in chromosome 8 telomeric region of the cells correlating with higher productivity (Ritter et al., 2016b).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Ritter et al., 2016b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
In a next generation sequencing study regrouping diverse cDNA libraries from CHO cell lines, 29 000 transcripts were assembled, which identified 13 187 mRNA transcripts.
“In a next generation sequencing (NGS) study regrouping diverse cDNA libraries from CHO cell lines, 29 000 transcripts were assembled, which identified 13 187 mRNA transcripts (Becker et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Becker et al., 2011 source
- Premisecitation
Many chemical inhibitors have been synthesized to target sialidases but their use in large-scale bioprocess productions is still very limited due to their elevated fabrication cost.
“Many chemical inhibitors have been synthesized to target these enzymes but their use in large-scale bioprocess productions is still very limited due to their elevated fabrication cost (Ferrari et al., 1998).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Ferrari et al., 1998 source
- Premisecitation
This study revealed predominant roles for some enzymes in the CHO cell glycosylation pathway.
“This study revealed predominant roles for some enzymes into CHO cells glycosylation pathway.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Yang et al., 2015 source
- Premisecitation
Approaches based on supplementation of cell culture media with precursors of the sialic acid pathway such as CMP-sialic acid, ManNAc and NeuNAc have limited and still debated effects.
“Some of these approaches are based on the supplementation of cell culture media with different precursors of the sialic acid pathway, such as CMP-sialic acid, ManNAc and NeuNAc, but their effects are limited and still debated (Gu and Wang, 1998;Baker et al., 2001;Hills et al., 2001;Bork et al., 2009;Hossler et al., 2009;Wong et al., 2010;Kildegaard et al., 2016).”
Quote in the paperNot a substantial claim0 of 3 sources checked
- May combine two claims. 47
- Classified as probably not a substantial claim. 30
- The quote only partly states this claim. 1
May combine two claims.
PremisecitationCHO cells can achieve substantial production rate, are suitable for large-scale industrial suspension culture, and can be adapted to grow in various serum-free and chemically defined culture media.
“These cells can achieve substantial production rate, are suitable for large-scale industrial suspension culture and can be adapted to grow in various serum-free and chemically defined culture media (Kim et al., 2012;Lai et al., 2013).”
Quote in the paperSubstantial claim1 of 2 sources checkedMay combine two claims.
PremisecitationProper glycosylation profiles can improve recombinant protein properties by increasing stability and half-life in blood circulation and decreasing immunogenicity.
“Studies have demonstrated that proper glycosylation profiles can improve recombinant protein properties such as increase their stability and half-life in blood circulation and decrease their immunogenicity (Ashwell and Harford, 1982;Runkel et al., 1998;Ghaderi et al., 2010;Ghaderi et al., 2012;Jefferis, 2016a;Jefferis, 2016b;Kuriakose et al., 2016).”
Quote in the paperSubstantial claim1 of 3 sources checkedMay combine two claims.
PremisecitationPlants produce core α1,3-fructose and β1,2-xylose, which are completely absent in human cells and could be immunogenic.
“Indeed, plants produce core α1,3-fructose and β1,2-xylose, which are completely absent in human cells and could be immunogenic (Karg et al., 2009;Ghaderi et al., 2012).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Karg et al., 2009 source
- cites Ghaderi et al., 2012 source
The plant-based expression systems section says plant N-glycans may carry β1,2-xylose and α1,3-fucose residues that are absent in humans and may be immunogenic. The claim says “fructose” rather than the paper’s “fucose,” so that component is not supported as written. (LLM, conf=0.88)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationCAP and HuH-7 cells display human-like glycosylation profiles.
“Two other cell lines, the CAP (CEVEC's Amniocyte Production) cells of human amniocytes origin and the HuH-7 cells of human hepatocellular carcinoma origin, are presently tested for recombinant glycoprotein production in preclinical phases and both display human-like glycosylation profiles (Schiedner et al., 2008;Wolfel et al., 2011;Enjolras et al., 2012;Swiech et al., 2012;Wissing et al., 2015).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites Schiedner et al., 2008 source
The Results section (page unavailable) reports that hAAT produced in human amniocyte cell lines was glycosylated and sialylated, with test results comparable to hAAT from human serum. This supports a human-like feature for the amniocyte-derived cells, but the paper does not establish a full glycosylation profile for CAP cells or address HuH-7 cells. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites Wolfel et al., 2011 source
The Summary (page not provided) says proteins produced by CAP-T cells showed a fully human posttranslational modification pattern, also observed in the original CAP cells. The Background describes CAP cells as producing proteins with authentic human posttranslational modifications. These passages support the claim for CAP cells, but the paper does not address HuH-7 cells or their glycosylation profiles. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites Enjolras et al., 2012 source
May combine two claims.
PremisecitationVelaglucerase alfa and other β-glucocerebrosidases produced in CHO and carrot cells show diverse glycan profiles but similar macrophage uptake, in vitro enzymatic activity, stability, and efficacy.
“Even though these three products show diverse glycan profiles, they showed similar macrophage uptake, in vitro enzymatic activity, stability and efficacy (Ben Turkia et al., 2013;Tekoah et al., 2013).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites Ben Turkia et al., 2013 source
The Introduction (page not specified) describes different glycan compositions, while the trial results report non-inferior clinical efficacy for velaglucerase alfa versus imiglucerase. But the Introduction says velaglucerase alfa enters cultured human macrophages more rapidly, not at a similar rate. This paper does not establish comparable in vitro activity or stability, or compare a carrot-cell product. (LLM, conf=0.90)
Experimental — accuracy not yet measured - cites Tekoah et al., 2013 source
The Introduction table identifies the three enzymes as produced in human fibrosarcoma, CHO, and carrot cells. The Discussion reports different glycan profiles but comparable enzymatic activity, stability, and macrophage uptake. It says clinical trial data *suggest* no significant differences in clinical improvement, rather than establishing similar efficacy as a finding of this study. (LLM, conf=0.83)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationNeutralizing anti-Imiglucerase antibodies were observed in 24% of patients, with an impact on the protein activity.
“Notably, neutralizing anti-Imiglucerase antibodies were observed in 24% of patients, with an impact on the protein activity (Ben Turkia et al., 2013).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Ben Turkia et al., 2013 source
The Discussion reports anti-imiglucerase antibodies in 23.5% of treated patients, approximately 24%. The Adverse events section identifies neutralizing antibodies that inhibited enzyme activity in vitro in one patient, but does not say that all four antibody-positive patients had neutralizing antibodies. The claim incorrectly applies the 24% figure to neutralizing antibodies. (LLM, conf=0.91)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTo date, only viral vectors used in gene therapy have been produced by transient transfections for clinical applications.
“To date, only viral vectors used in gene therapy have been produced by transient transfections for clinical applications (Wright, 2009).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Wright, 2009 source
The paper’s opening section describes transient transfection-based methods for generating clinical-grade AAV vectors, which are viral vectors used in gene therapy. It does not establish the claim’s exclusivity—that only gene-therapy viral vectors had been produced this way for clinical applications. (LLM, conf=0.85)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationHuman-cl rhFVIII produced in HEK293-F has a similar glycosylation profile to plasma-derived factor VIII and is deprived of α-gal and Neu5Gc.
“It is produced in HEK293-F cell line and has shown similar glycosylation profile to the plasma-derived factor VIII, deprived of α-gal and Neu5Gc (Casademunt et al., 2012;Kannicht et al., 2013).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Casademunt et al., 2012 source
The Methods and results passage identifies HEK 293 F cells as the source of the rhFVIII, and the Discussion says the product lacks Neu5Gc-type sialic acids and Galα1,3Gal (α-gal). Our copy does not establish that its glycosylation profile is similar to plasma-derived factor VIII; its discussion of an authentic human pattern of post-translational modifications does not make that comparison. No page numbers are available in the indexed passages. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites Kannicht et al., 2013 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationBecause the genome contains numerous sequence repetitions or highly homologous DNA sequences, efforts have been made to improve off-target effects and specificity of ZFN and TALEN enzymes.
“Because the genome contains numerous sequence repetitions or has highly homologous DNA sequences, efforts have been made in the last years to improve the offtarget effects and the specificity of these enzymes (Miller et al., 2007;Szczepek et al., 2007;Guo et al., 2010;Doyon et al., 2011).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites Miller et al., 2007 source
- cites Szczepek et al., 2007 source
The Results (page not provided) say the authors altered ZFN dimerization to improve cleavage specificity, and the Discussion links ZFN toxicity to off-target cleavage at related DNA sites. The paper does not address TALENs or establish that numerous genomic repetitions or highly homologous sequences motivated this work. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites Guo et al., 2010 source
The Discussion says that improving the FokI cleavage domain’s discrimination between highly homologous target sites may increase ZFN specificity and reduce off-target cleavage. It does not address TALENs or establish that numerous genomic repetitions motivated these efforts; the specificity and off-target benefits are framed as possibilities, not demonstrated outcomes. (LLM, conf=0.85)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationDifferent endonucleases employed as second generation tools include zinc finger nucleases (ZFN), meganucleases, TALEN, and CRISPR/Cas9.
“As second generation tools, different endonucleases have been employed.This category includes zinc finger nucleases (ZFN), meganucleases, transcription activators like effectors nucleases (TALEN) and CRISPR/Cas9 (Durai et al., 2005;Porteus and Carroll 2005;Cabaniols et al., 2010;Silva et al., 2011;Kim et al., 2012;Sanjana et al., 2012;Cho et al., 2013;Sun and Zhao, 2013).”
Quote in the paperNot a substantial claim1 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe PiggyBac transposon system uses an efficient transposase purified from the cabbage looper to integrate the gene of interest into the host genome.
“Also, the PiggyBac™ (System Bioscience inc.) transposon system uses an efficient transposase purified from the cabbage looper (Trichoplusia ni) to easily integrate the gene of interest into the host genome (Ding et al., 2005).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Ding et al., 2005 source
The supplied passage and the additional indexed passages have no section or page labels and contain unrelated, repetitive Arabic text. Searches for the cabbage looper, purified transposase, and genomic integration found no passage in our copy that addresses the claim. (LLM, conf=0.78)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationExpressing rFVIIIFc and rFIXFc in HEK293 resulted in greater tyrosine sulfation and glutamic acid γ-carboxylation compared to CHO cells and excluded α-gal and Neu5Gc from the manufactured products.
“Expressing these glycoproteins in HEK293 resulted in greater tyrosine sulfation and glutamic acid γ-carboxylation compared to CHO cells and excluded any α-gal and Neu5Gc from the manufactured products (Berkner, 1993;Kannicht et al., 2013;Peters et al., 2013;McCue et al., 2014McCue et al., , 2015)).”
Quote in the paperSubstantial claim1 of 3 sources checked- cites Berkner, 1993 source
- cites Kannicht et al., 2013 source
- cites Peters et al., 2013 source
The Materials and methods section reports that rFVIIIFc was produced in HEK293 cells, and the Results section reports nearly complete tyrosine sulfation. Neither section establishes greater sulfation than in CHO cells. The paper does not substantiate the sentence’s claims about rFIXFc, γ-carboxylation, or exclusion of α-gal and Neu5Gc. (LLM, conf=0.88)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationAn UCOE can prevent DNA methylation of the CMV promoter region, thus preventing gene expression silencing.
“It has been shown that an UCOE can also prevent DNA methylation of the CMV promoter region, thus preventing gene expression silencing (Lindahl Allen and Antoniou, 2007;Zhang et al., 2010a).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Lindahl Allen and Antoniou, 2007 source
The Introduction reports that the HNRPA2B1-CBX3 UCOE negates DNA-methylation-mediated silencing of hCMV-promoter-driven transgenes in stably transfected tissue-culture cells. It does not specifically say that the UCOE prevents methylation of the CMV promoter region; the paper’s own methylation analysis concerns the HNRPA2B1-CBX3 locus, not that promoter. (LLM, conf=0.85)
Experimental — accuracy not yet measured - cites Zhang et al., 2010a
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCell cycle progression was faster when using c-myc oncogene in CHO cells.
“Cell cycle progression was also faster when using c-myc oncogene in CHO cells (Kuystermans and Al-Rubeai, 2009).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Kuystermans and Al-Rubeai, 2009 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSTAR elements were discovered by a genomic screen of elements that would increase transgene expression.
“They were discovered by a genomic screen of elements that would increase transgene expression.(Kwaks et al., 2003;Sautter and Enenkel, 2005;Hoeksema et al., 2011;Van Blokland et al., 2011;Harraghy et al., 2015).”
Quote in the paperNot a substantial claim1 of 3 sources checkedMay combine two claims.
PremisecitationMAR and UCOE helped decrease the variability of expression between different clones and contributed to maintaining an active transcriptional state for better transgene expression.
“It was also demonstrated that MAR and UCOE helped decrease the variability of expression between the different clones and contributed in maintaining an active transcriptional state for better transgene expression (Williams et al., 2005;Galbete et al., 2009;Harraghy et al., 2011).”
Quote in the paperSubstantial claim1 of 3 sources checked- cites Williams et al., 2005 source
The Results and Discussion report that the CpG-island vectors increased the proportion of expressing clones, and the Conclusion says the findings are consistent with UCOEs maintaining a more open chromatin domain. But the paper does not demonstrate reduced expression variability between clones with the vectors studied; the Conclusion says they showed greater variability than the larger CpG-island construct used in earlier work. This paper studies UCOEs, not MARs. The indexed copy provides section labels but no page numbers. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites Galbete et al., 2009 source
- cites Harraghy et al., 2011 source
May combine two claims.
PremisecitationCst-II allows efficient polysialylation by the bacterial polysialyltransferase on recombinant alpha-1-antitrypsin in vitro and this results in a significantly longer half-life in mice, without affecting its specific activity.
“Cst-II, a bacterial sialyltransferase that can catalyze α2,8 sialylation, allows efficient polysialylation by the bacterial polysialyltransferase on recombinant alpha-1-antitrypsin in vitro and this results in a significantly longer half-life in mice, without affecting its specific activity (Lindhout et al., 2011).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Lindhout et al., 2011 source
The Abstract describes Cst-II priming A1AT for in vitro polysialylation, and the Results report a longer terminal half-life in mice without adversely affecting its in vitro inhibitory activity. However, the Discussion says the A1AT used was derived from human plasma, not recombinant A1AT. (LLM, conf=0.90)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationCo-expression of ST6Gal1 and β4GalT1 in HEK293 also helped optimizing sialylation of human Fc-IVIg, therefore enhancing its therapeutic activity.
“Co-expression of the same enzymes in HEK293 also helped optimizing sialylation of human Fc-IVIg (intravenous immunoglobulin), therefore enhancing its therapeutic activity (Washburn et al., 2015).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Washburn et al., 2015 source
Materials and Methods says B4GalT1 and ST6Gal1 were produced by transient expression in HEK293 cells, but does not say they were co-expressed. The Results describe using the enzymes in an optimized sialylation reaction, and the Discussion reports enhanced anti-inflammatory activity of the resulting IVIg. The paper therefore supports the enzyme-based sialylation and activity, but not the claimed co-expression mechanism. (LLM, conf=0.88)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationOthers have tried to reduce the fucosyltransferase level using siRNA.
“Others have tried to reduce the fucosyltransferase level using siRNA (Imai-Nishiya et al., 2007).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Imai-Nishiya et al., 2007 source
May combine two claims.
PremisecitationA bottleneck at the malate dehydrogenase II (MDHII) level was characterized for the tricarboxylic acid (TCA) cycle in CHO cells and pyruvate metabolism was shown to vary between high producing and low producing anti-CD20 CHO clones.
“A bottleneck at the malate dehydrogenase II (MDHII) level was characterized for the tricarboxylic acid (TCA) cycle in CHO cells and pyruvate metabolism was shown to vary between high producing and low producing anti-CD20 CHO clones (Chong et al., 2010;Ghorbaniaghdam et al., 2014).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Chong et al., 2010 source
- cites Ghorbaniaghdam et al., 2014 source
The Materials and Methods section identifies the high- and low-producing clones as producers of anti-CD20 antibody. The Discussion reports different pyruvate dehydrogenase and pyruvate carboxylase fluxes between those clones, supporting the pyruvate-metabolism part of the sentence. The passages from this paper do not characterize a TCA-cycle bottleneck at MDHII. (LLM, conf=0.88)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA first large-scale proteomic analysis identified 6164 proteins from both the proteome and glycoproteome of CHO-K1 cells.
“A first large-scale proteomic analysis identified 6164 proteins from both the proteome and glycoproteome of CHO-K1 cells (Baycin-Hizal et al., 2012).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Baycin-Hizal et al., 2012 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInhibition of the mmu-miR-466 h microRNA was shown to increase apoptosis resistance of these cells.
“Also, as discussed earlier, inhibition of the mmu-miR-466 h microRNA was shown to increase apoptosis resistance of these cells (Druz et al., 2011;Druz et al., 2013).”
Quote in the paperNot a substantial claim2 of 2 sources checkedMay combine two claims.
PremisecitationIn vitro galactosylation and sialylation of IgG1 Fc glycans did not show any impact on ADCC activity but showed a slight improvement of binding to FcγRIIa.
“Besides, in vitro galactosylation and sialylation of IgG1 Fc glycans did not show any impact on ADCC activity but showed a slight improvement of binding to FcγRIIa (Thomann et al., 2015).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Thomann et al., 2015 source
The Summary of results (Table 2) reports that increased sialylation had no impact on ADCC and that both galactosylation and sialylation increased FcγRIIa binding (slightly in the column assay). But it reports that increased galactosylation increased ADCC activity, contrary to the claim that neither modification affected ADCC. (LLM, conf=0.92)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationUsing the GlycoDelete expression system for transient anti-CD-20 production, recombinant proteins had very short sialylated N-glycans with high homogeneity on the Fc domain and reduced affinity to FcγRs compared to proteins expressed in wild-type 293S.
“Using this expression system for transient anti-CD-20 production, recombinant proteins had very short sialylated N-glycans with high homogeneity on the Fc domain and reduced affinity to FcγRs compared to proteins expressed in wild-type 293S.”
Quote in the paperSubstantial claim1 of 1 sources checked- cites Meuris et al., 2014 source
Split into 2 atoms — 1 confirmed, 1 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationCHO cells are involved in the production of over 70% of recombinant biopharmaceutical proteins, most of them monoclonal antibodies.
“It is involved in the production of over 70% of recombinant biopharmaceutical proteins, most of them being monoclonal antibodies (mAbs) (Durocher and Butler, 2009;Kim et al., 2012;Butler and Spearman, 2014).”
Quote in the paperNot a substantial claim0 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationA significant portion of approved biopharmaceutical products are recombinant proteins, and the number of them produced in mammalian expression platforms is increasing.
“A significant portion of these products are recombinant proteins, with an ongoing increase in the number of them produced in mammalian expression platforms (Walsh, 2014).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Walsh, 2014 source
May combine two claims.
PremisecitationCHO cells are refractory to infection by human viruses, which minimizes biosafety risks for commercial production.
“Furthermore, these cells are refractory to infection by human viruses, which minimizes biosafety risks for commercial production purpose (Boeger et al., 2005).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Boeger et al., 2005 source
May combine two claims.
InterpretationcitationUsing human cell lines for recombinant protein production would favor human-like glycosylation and warrant that proteins harbor at least non-immunogenic glycans.
“One way to favor human-like glycosylation would be to use human cell lines for recombinant protein production.This strategy would warrant that proteins harbor, if not the ideal glycosylation pattern, at least a non-immunogenic glycans (Swiech et al., 2012).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Swiech et al., 2012 source
May combine two claims.
PremisecitationRMCE technology had good success in increasing the success rate and reducing timelines for generation of stable industrial-grade CHO cell lines stably expressing monoclonal antibodies.
“This technology had good success in increasing the success rate and reducing timelines for the generation of stable industrial-grade CHO cell lines stably expressing monoclonal antibodies (Kito et al., 2002;Huang et al., 2007;Zhang et al., 2015).”
Quote in the paperNot a substantial claim0 of 3 sources checkedMay combine two claims.
InterpretationcitationFactor VIIa and Factor VIII are abundantly glycosylated and sulfated and are thus challenging to manufacture.
“These large glycoproteins are abundantly glycosylated and sulfated and are thus challenging to manufacture (Soukharev et al., 2002;Ishaque et al., 2007;Nivitchanyong et al., 2007).”
Quote in the paperNot a substantial claim0 of 3 sources checkedMay combine two claims.
PremisecitationCRISPR/Cas9 has already been validated in CHO cells and reduces production variability between clones.
“This technique has already been validated in CHO cells and reduces the production variability between clones (Lee et al., 2015b).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Lee et al., 2015b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
PremisecitationConflicting results in the literature have led to the conclusion that MAR activity could be sequence-specific and is influenced by specific vector configuration.
“However, conflicting results in the literature have led to the conclusion that MAR activity could be sequence-specific and is influenced by specific vector configuration (Harraghy et al., 2015).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Harraghy et al., 2015 source
May combine two claims.
PremisecitationTransient expression is ideal for high throughput screening for hits identification and very helpful for early stage product characterization.
“Yet, it is ideal for high throughput screening for hits identification and very helpful for early stage product characterization (Ozturk and Hu, 2005;Rosser et al., 2005;Rita Costa et al., 2010).”
Quote in the paperNot a substantial claim0 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationOther selection systems developed more recently include the OSCAR system, which uses minigene vectors encoding hypoxanthine phosphoribosyltransferase (HPRT), essential for purine synthesis.
“Other selection systems have been developed more recently, such as the OSCAR™ system from the University of Edinburgh, that uses minigene vectors encoding the hypoxanthine phosphoribosyltransferase (HPRT), essential for purine synthesis (Melton et al., 2001;Costa et al., 2012).”
Quote in the paperNot a substantial claim0 of 2 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationBHK cells are mostly used for the production of vaccines.
“Baby Hamster Kidney (BHK) cells are mostly been used for the production of vaccines (Durocher and Butler, 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Durocher and Butler, 2009 source
May combine two claims.
PremisecitationYeast cells produce glycoproteins with high-mannose glycan structures, which may be immunogenic and less potent in humans.
“However, these cells produce glycoproteins with high-mannose glycans structures, which may be immunogenic and less potent in humans (Dean, 1999;Gemmill and Trimble, 1999;Gerngross, 2004;Dumont et al., 2015).”
Quote in the paperSubstantial claim0 of 3 sources checkedMay combine two claims.
InterpretationreasoningDuring transient transfection, plasmid DNA is mostly kept extrachromosomally, and cells rapidly lose it during division, limiting the amount of expressed proteins.
“Indeed, during transient transfection, the plasmid DNA is mostly kept extrachromosomally, the cells rapidly losing it during division, therefore limiting the amount of expressed proteins.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationEpoetin delta produced in HT-1080 had better homogeneity of tetra-antennary glycans, higher sialic acid content, and no Neu5Gc compared to CHO-produced erythropoietin.
“Epoeitin delta produced in HT-1080 was found to have better homogeneity of its tetra-antennary glycans, higher sialic acid content and no Neu5Gc, compared to CHO-produced erythropoietin (Llop et al., 2008).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Llop et al., 2008 source
Classified as probably not a substantial claim. May combine two claims.
InterpretationcitationTargeted site gene integration could help biopharmaceutical companies minimize randomness of gene insertion and increase predictability for high transgene expression.
“This approach could eventually help biopharmaceutical companies minimize the randomness of gene insertion and increase the predictability for high transgene expression (Estes and Melville, 2014).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Estes and Melville, 2014
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
InterpretationreasoningSpecific integration may not be a one-size-fits-all approach as some therapeutic proteins may require a particular level of expression to fold properly or acquire adequate quality attributes.
“One should also keep in mind that such specific integration may not be a one-size-fits-all approach as some therapeutic proteins may require a particular level of expression to fold properly, or to acquire adequate quality attributes (e.g.glycosylation, proteolytic processing, etc.)”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationHKB-11 cells have recently shown high-level protein production and α2,3 and α2,6-sialic acid linkages.
“It has recently showed high-level protein production and α2,3 and α2,6-sialic acid linkages (Picanco-Castro et al., 2013).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Picanco-Castro et al., 2013 source
Probably not a substantial claim: may not pass S3 (load-bearing).
Interpretationnone givenZFN, TALEN and CRISPR/Cas9 technologies are mostly used for gene-specific knockout.
“ZFN, TALEN and CRISPR/Cas9 technologies are however mostly used for gene-specific knockout.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationAlthough tremendous efforts are required to isolate a highly productive and stable recombination host cell line compared to random integration strategies, targeted integration remains an attractive avenue that should help control and predict expression level of daughter clones.
“Although tremendous efforts are required to isolate a highly productive and stable recombination host cell line compared to random integration strategies, it remains a very attractive avenue that should help control and predict the expression level of the daughter clones (Estes and Melville, 2014).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Estes and Melville, 2014
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Interpretationnone givenFor production of glycoproteins in large quantities, stable gene expression systems remain the preferred avenue.
“When it comes to production of glycoproteins in large quantities, stable gene expression systems remain the preferred avenue.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSeveral recombinases have been used for targeted site approaches, among which Cre/Lox and Flp/FRT were mostly utilized.
“As first generation tools, several recombinases have been used for targeted site approaches, among which the Cre/Lox and the Flp/FRT were mostly utilized (Kito et al., 2002;Huang et al., 2007;Kim et al., 2012).”
Quote in the paperNot a substantial claim0 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisenone givenSome FUT8 knock-out CHO cell lines have been established and one is currently available on the market for glycoprotein productions.
“Since then, some FUT8 knock-out CHO cell lines have been established and one is currently available on the market for glycoprotein productions.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationCHOK1 hosts have larger endoplasmic reticulum and higher mitochondrial mass compared to DUXB11-derived CHO cells.
“To explain such discrepancies between studies, it was recently determined that CHOK1 hosts have larger endoplasmic reticulum and higher mitochondrial mass compared to DUXB11-derived CHO cells (Hu et al., 2013).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hu et al., 2013
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe first FUT8 -/- cell line was created by sequential homologous recombination.
“The first FUT8 -/-cell line was created by sequential homologous recombination (Yamane-Ohnuki et al., 2004).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Yamane-Ohnuki et al., 2004 source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisenone givenYeasts and insect cells can produce high-mannose or paucimannose oligosaccharides, while plant cells introduce undesirable α1,3-fucose and β1,2-xylose.
“For example, yeasts and insect cells can produce high-mannose or paucimannose oligosaccharides, while plant cells introduce undesirable α1,3-fucose and β1,2-xylose.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Premisenone givenBoth Neu5Gc and α-gal levels are significantly higher in murine cells such as NS0 and Sp2/0, compared to hamster cells.
“However, both Neu5Gc and α-gal levels are significantly higher in murine cells such as NS0 and Sp2/0, compared to hamster cells.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationAlthough the effects on cell longevity are clear in anti-apoptosis studies, many conflicting results regarding enhanced productivity with anti-apoptosis engineering have been reported.
“Although the effects on cell longevity are clear in these studies, many conflicting results regarding enhanced productivity with anti-apoptosis engineering have been reported (Kim et al., 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Kim et al., 2012 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationE2F-1 cell cycle transcription factor overexpression contributes to increase viable cell density in CHO batch cultures.
“For example, the E2F-1 cell cycle transcription factor overexpression contributes to increase viable cell density in CHO batch cultures (Majors et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Majors et al., 2008 source
May combine two claims.
InterpretationreasoningThe shift toward protein production favors sustained nutrient availability and reduced secondary metabolite accumulation.
“This shift toward protein production favors sustained nutrient availability and reduced secondary metabolite accumulation.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTranslational and/or post-translational processes might also be rate-limiting for protein production, because of the lack of correlation between gene copy number and the amount of secreted proteins.
“It has been suggested that translational and/or post-translational processes might also be rate-limiting for protein production, because of the lack of correlation between gene copy number and the amount of secreted proteins (Wilson et al., 1990;Mohan et al., 2008).”
Quote in the paperNot a substantial claim0 of 2 sources checkedThe quote only partly states this claim.
Premisenone givenAll anti-apoptosis strategies resulted in increased protein production.
“All strategies resulted in increased protein production.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationCombining histone deacetylase inhibitors with mild hypothermia (30-32 °C) during production phase or with antiapoptosis cell engineering could also increase productivity.
“Moreover, combining these inhibitors with mild hypothermia (30-32 °C) during production phase or with antiapoptosis cell engineering could also increase productivity (Kim and Lee, 2000;Kim and Lee, 2002;Sung et al., 2007;Kim et al., 2009a;Chen et al., 2011).”
Quote in the paperNot a substantial claim0 of 3 sources checkedMay combine two claims.
PremisecitationATF4 has been overexpressed to restore translation and enhance levels of anti-thrombin III produced in CHO cells.
“ATF4, another critical transcription factor in the UPR system, has been overexpressed to restore translation and enhance levels of anti-thrombin III produced in CHO cells (Ohya et al., 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Ohya et al., 2008 source
May combine two claims.
PremisecitationOverexpression of the mir-17 microRNA in CHO was shown to augment cell proliferation speed, leading to higher Epo-Fc yield.
“Furthermore, overexpression of the mir-17 microRNA in CHO was shown to augment cell proliferation speed, leading to higher Epo-Fc yield (Jadhav et al., 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Jadhav et al., 2012 source
Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based). May combine two claims.
Premisenone givenAs opposed to human cells, CHO and BHK cells do not express any α2,6-sialyltransferase activity and can generate glycans with terminal Neu5Gc and α-gal.
“Moreover, as opposed to human cells, CHO and BHK cells do not express any α2,6-sialyltransferase activity and can generate glycans with terminal Neu5Gc and α-gal.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationCHO Lec13 cells and rat hybridoma YB2/0 cells were employed, the former for its impaired synthesis of GDP-fucose and the latter for its reduced expression level of the fucosyltransferase FUT8.
“As early strategies, CHO Lec13 cells and rat hybridoma YB2/0 cells were employed, the former for its impaired synthesis of GDP-fucose and the latter for its reduced expression level of the fucosyltransferase FUT8 (Durocher and Butler, 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Durocher and Butler, 2009 source
Probably not a substantial claim: may not pass S3 (load-bearing).
InterpretationcitationThe reduced affinity to FcγRs might be required to increase safety, for example in the context of neutralizing antibodies used for inflammatory cytokine targeting.
“This reduced affinity might be required to increase safety, for example in the context of neutralizing antibodies used for inflammatory cytokine targeting (Lux et al., 2013).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Lux et al., 2013 source
Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Premisenone givenGlycoengineering strategies have been developed to reduce fucosylation or increase sialylation of biologics.
“Besides, glycoengineering strategies have been developed to reduce fucosylation or increase sialylation of biologics.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationThe tobacco plant Nicotiana benthamiana expression system was genetically modified to carry the human-type sialylation pathway and to generate mono-and disialylated structures with α2,3 and α2,6 linkage.
“The tobacco plant Nicotiana benthamiana expression system was genetically modified to carry the human-type sialylation pathway and to generate mono-and disialylated structures with α2,3 and α2,6 linkage (Kallolimath et al., 2016).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Kallolimath et al., 2016 source
May combine two claims.
PremisecitationKnockouts of 19 glycosyltransferase genes were recently achieved and EPO glycosylation was characterized to measure their impact.
“In an effort to characterize the contributions of the various glycosylation enzymes in CHO-K1 cells, knockouts of 19 glycosyltransferase genes were recently achieved and EPO glycosylation was characterized to measure their impact (Yang et al., 2015).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Yang et al., 2015 source
May combine two claims.
PremisecitationSince expression of GnTIII blocks fucosylation, CHO cells were engineered with both GnTIII and Golgi mannosidase II (ManII) for IgG production.
“Since expression of the β1,4-mannosyl-glycoprotein 4-β-N-acetylglucosaminyltransferase III (GnTIII) blocks fucosylation, CHO cells were engineered with both GnTIII and Golgi mannosidase II (ManII) for IgG production (Davies et al., 2001;Ferrara et al., 2006).”
Quote in the paperNot a substantial claim0 of 2 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationThe biopharmaceutical industry has entered the omics era, where systems biology is a central concept.
“The biopharmaceutical industry has entered the “omics” era, where systems biology is a central concept (Kildegaard et al., 2013).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Kildegaard et al., 2013 source
May combine two claims.
PremisecitationThe mammalian genomes possess 4 sialidase genes or pseudogenes which are expressed in various cellular compartments.
“The mammalian genomes possess 4 sialidase genes or pseudogenes (depending on the specie) which are expressed in various cellular compartments (Warner et al., 1993;Ferrari et al., 1994;Zhang et al., 2010b).”
Quote in the paperNot a substantial claim0 of 3 sources checkedMay combine two claims.
InterpretationreasoningIt has become attractive for the industry to produce proteins with optimal sialylation as it could generate substantial savings and confer a therapeutical advantage for the patients.
“Therefore, it has become attractive for the industry to produce proteins with optimal sialylation as it could generate substantial savings and confer a therapeutical advantage for the patients.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationThe anti-CS1 antibody produced with these cells is afucosylated and has enhanced in vitro ADCC activity and in vivo anti-tumor activity compared to the same antibody produced in HEK293 cells.
“Consequently, the anti-CS1 antibody produced with these cells is afucosylated and has enhanced in vitro ADCC activity and in vivo anti-tumor activity compared to the same antibody produced in HEK293 cells (Gomathinayagam et al., 2015).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Gomathinayagam et al., 2015 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationUsing iTRAQ, MCM2 and MCM5 helicases were identified as cell growth markers in CHO cells.
“Using iTRAQ, MCM2 and MCM5 helicases were identified as cell growth markers in CHO cells (Carlage et al., 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Carlage et al., 2012 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationChaperones BiP and PDI were differentially expressed in stationary compared to exponential phase in CHO cells overexpressing Bcl-xl.
“Besides, chaperones BiP and PDI were differentially expressed in stationary compared to exponential phase in CHO cells overexpressing Bcl-xl (Carlage et al., 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Carlage et al., 2012 source
The paper relies on this without support.
Producing more proteins with fewer resources and in less time remains a significant challenge when working with mammalian cell expression systems.
“Producing more proteins with fewer resources and in less time remains a significant challenge when working with mammalian cell expression systems.”
The paper relies on this without support.
Histone deacetylase inhibitors preserve histone acetylation, reduce their interaction with DNA, and help maintain chromatin in an open configuration, leading to enhanced or prolonged transgene transcription.
“These histone deacetylase inhibitors, by preserving histones acetylation, reduce their interaction with DNA and helps maintain chromatin in an open configuration, leading to enhanced or prolonged transgene transcription.”
The paper relies on this without support.
Addition of terminal sialic acids on the glycans of protein therapeutics helps to maintain them into the blood circulation by preventing their recognition by the asialoglycoprotein receptors highly expressed in liver hepatocytes.
“Addition of terminal sialic acids on the glycans of protein therapeutics helps to maintain them into the blood circulation by preventing their recognition by the asialoglycoprotein receptors highly expressed in liver hepatocytes.”
The paper relies on this without support.
Mammalian cell lines, in particular CHO cells, are now extensively used for production of therapeutic glycoproteins by the biopharmaceutical industry.
“Mammalian cell lines, in particular CHO cells, are now extensively used for production of therapeutic glycoproteins by the biopharmaceutical industry.”
The paper relies on this without support.
These cells possess many advantages in terms of cell culture and have the capacity to generate high titers.
“These cells possess many advantages in terms of cell culture and have the capacity to generate high titers.”
The paper relies on this without support.
Another limitation of glycoprotein production is the proper folding of the desired biologics.
“Another limitation of glycoprotein production is the proper folding of the desired biologics.”
The paper relies on this without support.
Chaperones play a key role in the folding process of nascent proteins.
“Chaperones play a key role in the folding process of nascent proteins.”
The paper relies on this without support.
Combining all omics data using computational models will help broaden understanding and improve the various expression systems used by the biopharmaceutical industry for glycoprotein production.
“Yet, combining all “omics” data using computational models will help broaden our understanding and improve the various expression systems used by the biopharmaceutical industry for glycoprotein production.”
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Plant-specific glycan is identified as both fructose and fucose
MinorThe paper gives two different names for the plant-specific α1,3-linked sugar: fructose in Section 2.4 and fucose in Section 4.
“Indeed, plants produce core α1,3-fructose and β1,2-xylose, which are completely absent in human cells and could be immunogenic”
“while plant cells introduce undesirable α1,3-fucose and β1,2-xylose.”
Cites
Characteristics of a human cell line transformed by DNA from human adenovirus type 5
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- Authors
- Lalonde, M.-E., & Durocher, Y.
- Affiliations
- Université de Montréal (CA)
- National Research Council Canada (CA)
- Corresponding author
- Durocher, Yves
- ORCID
- Durocher, Yves
- Venue
- Journal of Biotechnology
- Publisher
- Elsevier BV
- Published
- 2017-06
- Volume
- 251
- Pages
- 128-140
- ISSN
- 0168-1656 (ISSN-L)
- OpenAlex
- W2608656888
- Semantic Scholar
- d121382e44037491f896fe3ef571c7ee21b21b3a
- Cited by
- 296
- References
- 257
- Citations by year
- 2026: 19 · 2025: 19 · 2024: 29 · 2023: 34 · 2022: 31 · 2021: 34 · 2020: 40 · 2019: 58 · 2018: 25 · 2017: 5 · 2013: 1
- FWCI
- 3.28
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biotechnology (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- NPARC (submittedVersion)
- Funders
- CIHR (Canadian Institutes of Health Research) fellowship
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Viral Infectious Diseases and Gene Expression in Insects
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein purification and stability
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Glycosylation and Glycoproteins Research
- Keywords
- therapeutic glycoproteins, mammalian cell expression systems, glycosylation, monoclonal antibodies, glycan profiles, cell engineering, CHO cells, recombinant protein expression, biopharmaceuticals, omics technologies
- MeSH terms
- Animals, Cell Line, Glycoproteins, Humans, Recombinant Proteins, Genomics, Cell Engineering
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-30.
Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-30.
Cited sources are checked by gpt-6-sol.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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