Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

UniFrac: a New Phylogenetic Method for Comparing Microbial Communities

Lozupone, C., & Knight, R. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.12.8228-8235.2005 · Cited by 8,227

Effects of inoculants Lactobacillus brevis and Lactobacillus parafarraginis on the fermentation characteristics and microbial communities of corn stover silage

Xu, Z., He, H., Zhang, S., & Kong, J. (2017) · Scientific Reports · doi:10.1038/s41598-017-14052-1 · Cited by 94

Zooming into food-associated microbial consortia: a “cultural” evolution

Cocolin, L., & Ercolini, D. (2015) · Current Opinion in Food Science · doi:10.1016/j.cofs.2015.01.003 · Cited by 93

The effect of short-term exposure to energy-matched diets enriched in fat or sugar on memory, gut microbiota and markers of brain inflammation and plasticity

Beilharz, J. E., Kaakoush, N. O., Maniam, J., & Morris, M. J. (2016) · Brain Behavior and Immunity · doi:10.1016/j.bbi.2016.07.151 · Cited by 93

Elevated Levels of Pathogenic Indicator Bacteria and Antibiotic Resistance Genes after Hurricane Harvey’s Flooding in Houston

Yu, P., Zaleski, A., Li, Q., He, Y., Mapili, K., Pruden, A., Alvarez, P. J. J., & Stadler, L. B. (2018) · Environmental Science & Technology Letters · doi:10.1021/acs.estlett.8b00329 · Cited by 93

Formation of perfluorocarboxylic acids from 6:2 fluorotelomer sulfonate (6:2 FTS) in landfill leachate: Role of microbial communities

Hamid, H., Li, L. Y., & Grace, J. R. (2020) · Environmental Pollution · doi:10.1016/j.envpol.2019.113835 · Cited by 92

Bioinformatics for the Human Microbiome Project

Gevers, D., Pop, M., Schloss, P. D., & Huttenhower, C. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002779 · Cited by 91

Revegetation of urban green space rewilds soil microbiotas with implications for human health and urban design

Mills, J. G., Bissett, A., Gellie, N. J. C., Lowe, A. J., Selway, C. A., Thomas, T., Weinstein, P., Weyrich, L. S., & Breed, M. F. (2020) · Restoration Ecology · doi:10.1111/rec.13175 · Cited by 90

Effects of dietary supplementation with a microalga (Schizochytrium sp.) on the hemato-immunological, and intestinal histological parameters and gut microbiota of Nile tilapia in net cages

Souza, F. P. D., Lima, E. C. S. D., Urrea-Rojas, A. M., Suphoronski, S. A., Facimoto, C. T., Bezerra Júnior, J. D. S., Oliveira, T. E. S. D., Pereira, U. D. P., Santis, G. W. D., Oliveira, C. A. L. D., et al. (2020) · PLoS ONE · doi:10.1371/journal.pone.0226977 · Cited by 90

Microbial iron mats at the mid-atlantic ridge and evidence that zetaproteobacteria may be restricted to iron-oxidizing marine systems.

Scott, J. J., Breier, J. A., Luther, G. W., & Emerson, D. (2015) · PLoS ONE · doi:10.1371/journal.pone.0119284 · Cited by 88

Characterization of the bacterial biodiversity in Pico cheese (an artisanal Azorean food)

Riquelme, C., Câmara, S., Enes Dapkevicius, M. D. L. N., Vinuesa, P., da Silva, C. C. G., Malcata, F. X., & Rego, O. A. (2015) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2014.09.031 · Cited by 87

Nature-derived microbiota exposure as a novel immunomodulatory approach

Nurminen, N., Lin, J., Grönroos, M., Puhakka, R., Kramna, L., Vari, H. K., Viskari, H., Oikarinen, S., Roslund, M., Parajuli, A., et al. (2018) · Future Microbiology · doi:10.2217/fmb-2017-0286 · Cited by 80

One-year calorie restriction impacts gut microbial composition but not its metabolic performance in obese adolescents

Ruiz, A., Cerdó, T., Jáuregui, R., Pieper, D. H., Marcos, A., Clemente, A., García, F., Margolles, A., Ferrer, M., Campoy, C., et al. (2017) · Environmental Microbiology · doi:10.1111/1462-2920.13713 · Cited by 85

Transient changes in milk production efficiency and bacterial community composition resulting from near-total exchange of ruminal contents between high- and low-efficiency Holstein cows

Weimer, P. J., Cox, M. S., Vieira de Paula, T., Lin, M., Hall, M. B., & Suen, G. (2017) · Journal of Dairy Science · doi:10.3168/jds.2017-12746 · Cited by 86

Lactobacillus supports Clostridiales to restrict gut colonization by multidrug-resistant Enterobacteriaceae

Djukovic, A., Garzón, M. J., Canlet, C., Cabral, V., Lalaoui, R., García-Garcerá, M., Rechenberger, J., Tremblay-Franco, M., Peñaranda, I., Puchades-Carrasco, L., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-33313-w · Cited by 85

Injury, dysbiosis, and filaggrin deficiency drive skin inflammation through keratinocyte IL-1α release

Archer, N. K., Jo, J.-H., Lee, S. K., Kim, D., Smith, B., Ortines, R. V., Wang, Y., Marchitto, M. C., Ravipati, A., Cai, S. S., et al. (2019) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2018.08.042 · Cited by 82

FoodMicrobionet: A Database for the Visualisation and Exploration of Food Bacterial Communities Based on Network Analysis

Parente, E., Cocolin, L., De Filippis, F., Zotta, T., Ferrocino, I., O'Sullivan, O., Neviani, E., De Angelis, M., Cotter, P. D., & Ercolini, D. (2016) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2015.12.001 · Cited by 82

Bacterial Dynamics of Wheat Silage

Keshri, J., Chen, Y., Pinto, R., Kroupitski, Y., Weinberg, Z. G., & Sela Saldinger, S. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01532 · Cited by 82

Community profiling and gene expression of fungal assimilatory nitrate reductases in agricultural soil

Gorfer, M., Blumhoff, M., Klaubauf, S., Urban, A., Inselsbacher, E., Bandian, D., Mitter, B., Sessitsch, A., Wanek, W., & Strauss, J. (2011) · The ISME Journal · doi:10.1038/ismej.2011.53 · Cited by 78

The administration of intranasal live attenuated influenza vaccine induces changes in the nasal microbiota and nasal epithelium gene expression profiles

Tarabichi, Y., Li, K., Hu, S., Nguyen, C., Wang, X., Elashoff, D., Saira, K., Frank, B., Bihan, M., Ghedin, E., et al. (2015) · Microbiome · doi:10.1186/s40168-015-0133-2 · Cited by 77

Impact of hypocaloric hyperproteic diet on gut microbiota in overweight or obese patients with nonalcoholic fatty liver disease: a pilot study

Pataky, Z., Genton, L., Spahr, L., Lazarevic, V., Terraz, S., Gaïa, N., Rubbia-Brandt, L., Golay, A., Schrenzel, J., & Pichard, C. (2016) · Digestive Diseases and Sciences · doi:10.1007/s10620-016-4179-1 · Cited by 75

Gene transfer in Leptolyngbya sp. strain BL0902, a cyanobacterium suitable for production of biomass and bioproducts

Taton, A., Lis, E., Adin, D. M., Dong, G., Cookson, S., Kay, S. A., Golden, S. S., & Golden, J. W. (2012) · PLoS ONE · doi:10.1371/journal.pone.0030901 · Cited by 70

Barrett's esophagus is associated with a distinct oral microbiome

Snider, E. J., Compres, G., Freedberg, D. E., Giddins, M. J., Khiabanian, H., Lightdale, C. J., Nobel, Y. R., Toussaint, N. C., Uhlemann, A.-C., & Abrams, J. A. (2018) · Clinical and Translational Gastroenterology · doi:10.1038/s41424-018-0005-8 · Cited by 72

Differentiated mechanisms of biochar mitigating straw-induced greenhouse gas emissions in two contrasting paddy soils

Wang, Y.-Q., Bai, R., Di, H. J., Mo, L.-Y., Han, B., Zhang, L.-M., & He, J.-Z. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02566 · Cited by 74

Microbial community compositions in the gastrointestinal tract of Chinese Mongolian sheep using Illumina MiSeq sequencing revealed high microbial diversity

Zeng, Y., Zeng, D., Ni, X., Zhu, H., Jian, P., Zhou, Y., Xu, S., Lin, Y., Li, Y., Yin, Z., et al. (2017) · AMB Express · doi:10.1186/s13568-017-0378-1 · Cited by 72

Changes in the swine gut microbiota in response to porcine epidemic diarrhea infection.

Koh, H.-W., Kim, M. S., Lee, J.-S., Kim, H., & Park, S.-J. (2015) · Microbes and Environments · doi:10.1264/jsme2.me15046 · Cited by 69

Characterization of the upper respiratory tract microbiomes of patients with pandemic H1N1 influenza

Chaban, B., Albert, A., Links, M. G., Gardy, J., Tang, P., & Hill, J. E. (2013) · PLoS ONE · doi:10.1371/journal.pone.0069559 · Cited by 69

High-Throughput Analysis Reveals Seasonal Variation of the Gut Microbiota Composition Within Forest Musk Deer (Moschus berezovskii)

Hu, X., Liu, G., Li, Y., Wei, Y., Lin, S., Liu, S., Zheng, Y., & Hu, D. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.01674 · Cited by 69

Dietary Manganese Promotes Staphylococcal Infection of the Heart

Juttukonda, L. J., Berends, E. T. M., Zackular, J. P., Moore, J. L., Stier, M. T., Zhang, Y., Schmitz, J. E., Beavers, W. N., Wijers, C. D., Gilston, B. A., et al. (2017) · Cell Host & Microbe · doi:10.1016/j.chom.2017.08.009 · Cited by 68

Farm-to-Fork Profiling of Bacterial Communities Associated with an Artisan Cheese Production Facility

Falardeau, J., Keeney, K., Trmčić, A., Kitts, D., & Wang, S. (2019) · Food Microbiology · doi:10.1016/j.fm.2019.04.002 · Cited by 69

Deep 16S rRNA metagenomics and quantitative PCR analyses of the premature infant fecal microbiota

Arboleya, S., Ang, L., Margolles, A., Yiyuan, L., Dongya, Z., Liang, X., Solís, G., Fernández, N., de los Reyes-Gavilán, C. G., & Gueimonde, M. (2012) · Anaerobe · doi:10.1016/j.anaerobe.2012.04.013 · Cited by 66

Nasopharyngeal microbiome diversity changes over time in children with asthma

Pérez-Losada, M., Alamri, L., Crandall, K. A., & Freishtat, R. J. (2017) · PLoS ONE · doi:10.1371/journal.pone.0170543 · Cited by 63

An Investigation into Rumen Fungal and Protozoal Diversity in Three Rumen Fractions, during High-Fiber or Grain-Induced Sub-Acute Ruminal Acidosis Conditions, with or without Active Dry Yeast Supplementation

Ishaq, S. L., AlZahal, O., Walker, N., & McBride, B. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01943 · Cited by 61

Analysis of gut microbiota and their metabolic potential in patients with schizophrenia treated with olanzapine: results from a six-week observational prospective cohort study

Pełka-Wysiecka, J., Kaczmarczyk, M., Bąba-Kubiś, A., Liśkiewicz, P., Wroński, M., Skonieczna-Żydecka, K., Marlicz, W., Misiak, B., Starzyńska, T., Kucharska-Mazur, J., et al. (2019) · Journal of Clinical Medicine · doi:10.3390/jcm8101605 · Cited by 59

Reprogrammed and transmissible intestinal microbiota confer diminished susceptibility to induced colitis in TMF −/− mice

Bel, S., Elkis, Y., Elifantz, H., Koren, O., Ben-Hamo, R., Lerer-Goldshtein, T., Rahimi, R., Ben Horin, S., Nyska, A., Shpungin, S., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1319114111 · Cited by 56

Feeding essential oils to neonatal holstein dairy calves results in increased ruminal prevotellaceae abundance and propionate concentrations

Poudel, P., Froehlich, K., Casper, D. P., & St-Pierre, B. (2019) · Microorganisms · doi:10.3390/microorganisms7050120 · Cited by 58

Metagenome analysis of bacterial diversity in Tibetan kefir grains

Gao, J., Gu, F., He, J., Xiao, J., Chen, Q., Ruan, H., & He, G. (2013) · European Food Research and Technology · doi:10.1007/s00217-013-1912-2 · Cited by 57

Effect of Bifidobacterium bifidum on Clinical Characteristics and Gut Microbiota in Attention-Deficit/Hyperactivity Disorder

Wang, L.-J., Yang, C.-Y., Kuo, H.-C., Chou, W.-J., Tsai, C.-S., & Lee, S.-Y. (2022) · Journal of Personalized Medicine · doi:10.3390/jpm12020227 · Cited by 58

Ultradeep Microbial Communities at 4.4 km within Crystalline Bedrock: Implications for Habitability in a Planetary Context

Purkamo, L., Kietäväinen, R., Nuppunen-Puputti, M., Bomberg, M., & Cousins, C. (2020) · Life · doi:10.3390/life10010002 · Cited by 55

Response of the human gut and saliva microbiome to urbanization in Cameroon

Lokmer, A., Aflalo, S., Amougou, N., Lafosse, S., Froment, A., Tabe, F. E., Poyet, M., Groussin, M., Said-Mohamed, R., & Ségurel, L. (2020) · Scientific Reports · doi:10.1038/s41598-020-59849-9 · Cited by 46

Microbial communities from the world’s largest lithium reserve, Salar de Atacama, Chile: Life at high LiCl concentrations

Cubillos, C. F., Aguilar, P., Grágeda, M., & Dorador, C. (2018) · Journal of Geophysical Research: Biogeosciences · doi:10.1029/2018jg004621 · Cited by 51

Dietary ursolic acid improves health span and life span in male Drosophila melanogaster

Staats, S., Wagner, A. E., Lüersen, K., Künstner, A., Meyer, T., Kahns, A. K., Derer, S., Graspeuntner, S., Rupp, J., Busch, H., et al. (2019) · BioFactors · doi:10.1002/biof.1467 · Cited by 48

Total rRNA-seq analysis gives insight into bacterial, fungal, protozoal and archaeal communities in the rumen using an optimized RNA isolation method

Elekwachi, C. O., Wang, Z., Wu, X., Rabee, A., & Forster, R. J. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01814 · Cited by 48

Molecular diversity of bacteria in commercially available “Spirulina” food supplements

Vardaka, E., Kormas, K. A., Katsiapi, M., Genitsaris, S., & Moustaka-Gouni, M. (2016) · PeerJ · doi:10.7717/peerj.1610 · Cited by 48

The structural and functional capacity of ruminal and cecal microbiota in growing cattle was unaffected by dietary supplementation of linseed oil and nitrate

Popova, M., McGovern, E., McCabe, M. S., Martin, C., Doreau, M., Arbre, M., Meale, S. J., Morgavi, D. P., & Waters, S. M. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.00937 · Cited by 48

Gut microbiota in ALS: possible role in pathogenesis?

McCombe, P. A., Henderson, R. D., Lee, A., Lee, J. D., Woodruff, T. M., Restuadi, R., McRae, A., Wray, N. R., Ngo, S., & Steyn, F. J. (2019) · Expert Review of Neurotherapeutics · doi:10.1080/14737175.2019.1623026 · Cited by 46

An altered fecal microbial profiling in rosacea patients compared to matched controls

Chen, Y.-J., Lee, W.-H., Ho, H. J., Tseng, C.-H., & Wu, C.-Y. (2021) · Journal of the Formosan Medical Association · doi:10.1016/j.jfma.2020.04.034 · Cited by 46

Experimentally induced metamorphosis in highly regenerative axolotl (ambystoma mexicanum) under constant diet restructures microbiota

Demircan, T., Ovezmyradov, G., Yıldırım, B., Keskin, İ., İlhan, A. E., Fesçioğlu, E. C., Öztürk, G., & Yıldırım, S. (2018) · Scientific Reports · doi:10.1038/s41598-018-29373-y · Cited by 45

Intermittent cafeteria diet identifies fecal microbiome changes as a predictor of spatial recognition memory impairment in female rats

Leigh, S.-J., Kaakoush, N. O., Bertoldo, M. J., Westbrook, R. F., & Morris, M. J. (2020) · Translational Psychiatry · doi:10.1038/s41398-020-0734-9 · Cited by 45

Differences in the Composition of Gut Microbiota between Patients with Parkinson’s Disease and Healthy Controls: A Cohort Study

Zapała, B., Stefura, T., Wójcik-Pędziwiatr, M., Kabut, R., Bałajewicz-Nowak, M., Milewicz, T., Dudek, A., Stój, A., & Rudzińska-Bar, M. (2021) · Journal of Clinical Medicine · doi:10.3390/jcm10235698 · Cited by 44

Unique communities of anoxygenic phototrophic bacteria in saline lakes of Salar de Atacama (Chile): evidence for a new phylogenetic lineage of phototrophic Gammaproteobacteria from pufLM gene analyses: APB of Salar de Atacama using functional genes

Thiel, V., Tank, M., Neulinger, S. C., Gehrmann, L., Dorador, C., & Imhoff, J. F. (2010) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2010.00966.x · Cited by 44

Carbohydrate complexity limits microbial growth and reduces the sensitivity of human gut communities to perturbations

Ostrem Loss, E., Thompson, J., Cheung, P. L. K., Qian, Y., & Venturelli, O. S. (2023) · Nature Ecology & Evolution · doi:10.1038/s41559-022-01930-9 · Cited by 38

Impact of poplar-based phytomanagement on soil properties and microbial communities in a metal-contaminated site

Foulon, J., Zappelini, C., Durand, A., Valot, B., Blaudez, D., & Chalot, M. (2016) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiw163 · Cited by 42

Comparison of bacterial communities in faeces of beef cattle fed diets containing corn and wet distillers’ grain with solubles: Cattle faecal communities

Durso, L. M., Wells, J. E., Harhay, G. P., Rice, W. C., Kuehn, L., Bono, J. L., Shackelford, S., Wheeler, T., & Smith, T. P. L. (2012) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2012.03265.x · Cited by 42

Parkinson’s Disease Medication Alters Small Intestinal Motility and Microbiota Composition in Healthy Rats

van Kessel, S. P., Bullock, A., van Dijk, G., & El Aidy, S. (2022) · mSystems · doi:10.1128/msystems.01191-21 · Cited by 41

Host immune selection of rumen bacteria through salivary secretory IgA

Fouhse, J. M., Smiegielski, L., Tuplin, M., Guan, L. L., & Willing, B. P. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.00848 · Cited by 37

High-resolution microbiome profiling for detection and tracking of Salmonella enterica

Grim, C. J., Daquigan, N., Lusk Pfefer, T. S., Ottesen, A. R., White, J. R., & Jarvis, K. G. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01587 · Cited by 36

Shifting Microbial Communities Sustain Multiyear Iron Reduction and Methanogenesis in Ferruginous Sediment Incubations

Bray, M. S., Wu, J., Reed, B. C., Kretz, C. B., Belli, K. M., Simister, R. L., Henny, C., Stewart, F. J., DiChristina, T. J., Brandes, J. A., et al. (2017) · Geobiology · doi:10.1111/gbi.12239 · Cited by 34

Elevated fecal calprotectin is associated with gut microbial dysbiosis, altered serum markers and clinical outcomes in older individuals

Heinzel, S., Jureczek, J., Kainulainen, V., Nieminen, A. I., Suenkel, U., von Thaler, A.-K., Kaleta, C., Eschweiler, G. W., Brockmann, K., Aho, V. T. E., et al. (2024) · Scientific Reports · doi:10.1038/s41598-024-63893-0 · Cited by 36

The Intestinal Microbiome in Nonalcoholic Fatty Liver Disease

Puri, P., & Sanyal, A. J. (2018) · Clinics in Liver Disease · doi:10.1016/j.cld.2017.08.009 · Cited by 33

Prediction of Gut Microbial Community Structure and Function in Polycystic Ovary Syndrome With High Low-Density Lipoprotein Cholesterol

Zhu, X., Li, Y., Jiang, Y., Zhang, J., Duan, R., Liu, L., Liu, C., Xu, X., Yu, L., Wang, Q., et al. (2021) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2021.665406 · Cited by 32

Classification of 16S rRNA reads is improved using a niche-specific database constructed by near-full length sequencing

Myer, P. R., McDaneld, T. G., Kuehn, L. A., Dedonder, K. D., Apley, M. D., Capik, S. F., Lubbers, B. V., Harhay, G. P., Harhay, D. M., Keele, J. W., et al. (2020) · PLOS ONE · doi:10.1371/journal.pone.0235498 · Cited by 31

Assessing the colonic microbiome, hydrogenogenic and hydrogenotrophic genes, transit and breath methane in constipation

Wolf, P. G., Parthasarathy, G., Chen, J., O'Connor, H. M., Chia, N., Bharucha, A. E., & Gaskins, H. R. (2017) · Neurogastroenterology & Motility · doi:10.1111/nmo.13056 · Cited by 26

Community structure of lithotrophically-driven hydrothermal microbial mats from the Mariana Arc and back-arc.

Hager, K. W., Fullerton, H., Butterfield, D. A., & Moyer, C. L. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01578 · Cited by 28

Fibrolytic Bacteria Isolated from the Rumen of North American Moose (Alces alces) and Their Use as a Probiotic in Neonatal Lambs

Ishaq, S. L., Kim, C. J., Reis, D., & Wright, A.-D. G. (2015) · PLoS ONE · doi:10.1371/journal.pone.0144804 · Cited by 29

Timing of antimicrobial prophylaxis for cesarean section is critical for gut microbiome development in term born infants

Bossung, V., Lupatsii, M., Dashdorj, L., Tassiello, O., Jonassen, S., Pagel, J., Demmert, M., Wolf, E. A., Rody, A., Waschina, S., et al. (2022) · Gut Microbes · doi:10.1080/19490976.2022.2038855 · Cited by 28

Dynamic changes and correlation of organic acids, physicochemical properties, and microbial communities during fermentation of Sichuan bran vinegar

Tong, W., Chen, G., Yu, H., Wang, X., Xue, R., Yang, Y., Luo, H., & Huang, D. (2024) · Journal of Food Composition and Analysis · doi:10.1016/j.jfca.2024.106355 · Cited by 24

Nicotinamide Riboside-Conditioned Microbiota Deflects High-Fat Diet-Induced Weight Gain in Mice

Lozada-Fernández, V. V., deLeon, O., Kellogg, S. L., Saravia, F. L., Hadiono, M. A., Atkinson, S. N., Grobe, J. L., & Kirby, J. R. (2022) · mSystems · doi:10.1128/msystems.00230-21 · Cited by 23

Molecular hydrogen produced by elemental magnesium inhibits rumen fermentation and enhances methanogenesis in dairy cows

Ma, Z. Y., Zhang, X. M., Wang, M., Wang, R., Jiang, Z. Y., Tan, Z. L., Gao, F. X., & Muhammed, A. (2019) · Journal of Dairy Science · doi:10.3168/jds.2018-15647 · Cited by 22

Effect of Chia (Salvia hispanica L.) Associated with High-Fat Diet on the Intestinal Health of Wistar Rats

Mishima, M. D. V., Da Silva, B. P., Gomes, M. J. C., Toledo, R. C. L., Mantovani, H. C., José, V. P. B. D. S., Costa, N. M. B., Tako, E., & Martino, H. S. D. (2022) · Nutrients · doi:10.3390/nu14224924 · Cited by 23

Effects of ID-HWS1000 on the Perception of Bowel Activity and Microbiome in Subjects with Functional Constipation: A Randomized, Double-Blind Placebo-Controlled Study

Kim, M. C., Lee, S., Park, J. K., Park, J., Lee, D., Park, J., Kim, B.-Y., Cho, M. S., Kim, T.-Y., Park, H. Y., et al. (2021) · Journal of Medicinal Food · doi:10.1089/jmf.2020.4746 · Cited by 18

Leveraging Sequence-based Faecal Microbial Community Survey Data to Identify Alterations in Gut Microbiota among Patients with Parkinson’s Disease

Ji, T., Huang, H., Liu, J., Peng, T., Zhou, X., Tan, Q., Yuan, J., Hua, H., Ding, S., & Liu, H. (2021) · European Journal of Neuroscience · doi:10.1111/ejn.14952 · Cited by 17

Effect of cattle breed and basal diet on digestibility, rumen bacterial communities, and eating and rumination activity

Carvalho, P. H. V., Pinto, A. C. J., Millen, D. D., & Felix, T. L. (2020) · Journal of Animal Science · doi:10.1093/jas/skaa114 · Cited by 18

Brassicaceous seed meal, root removal, and chemical fumigation vary in their effects on soil quality parameters and Pratylenchus penetrans in a replanted floricane raspberry production system

Rudolph, R. E., Zasada, I. A., Hesse, C., & DeVetter, L. W. (2019) · Applied Soil Ecology · doi:10.1016/j.apsoil.2018.08.024 · Cited by 15

Deciphering Trifolium pratense L. holobiont reveals a microbiome resilient to future climate changes

Wahdan, S. F. M., Tanunchai, B., Wu, Y., Sansupa, C., Schädler, M., Dawoud, T. M., Buscot, F., & Purahong, W. (2021) · MicrobiologyOpen · doi:10.1002/mbo3.1217 · Cited by 15

Strategies for building computing skills to support microbiome analysis: A five‐year perspective from the EDAMAME workshop

Shade, A., Dunivin, T. K., Choi, J., Teal, T. K., & Howe, A. C. (2019) · mSystems · doi:10.1128/msystems.00297-19 · Cited by 14

Comprehensive probiogenomics analysis of the commensal Escherichia coli CEC15 as a potential probiotic strain

da Silva, T. F., Glória, R. D. A., de Sousa, T. J., Americo, M. F., Freitas, A. D. S., Viana, M. V. C., de Jesus, L. C. L., da Silva Prado, L. C., Daniel, N., Ménard, O., et al. (2023) · BMC Microbiology · doi:10.1186/s12866-023-03112-4 · Cited by 11

‘Microbial monitoring in the EDEN ISS greenhouse, a mobile test facility in antarctica’.

Fahrion, J., Fink, C., Zabel, P., Schubert, D., Mysara, M., Van Houdt, R., Eikmanns, B., Beblo-Vranesevic, K., & Rettberg, P. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00525 · Cited by 7

Guts Bacterial Communities of Porcellio dilatatus: Symbionts Predominance, Functional Significance and Putative Biotechnological Potential

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