Cited by 11,314Advanced MRI Techniques and ApplicationsAdvanced Neuroimaging Techniques and ApplicationsFunctional Brain Connectivity Studies

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FSL

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Jenkinson, Mark, Beckmann, Christian F., Behrens, Timothy E.J., Woolrich, Mark W., Smith, Stephen M.·2012·NeuroImage

DOI 10.1016/j.neuroimage.2011.09.015

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Abstract

FSL (the FMRIB Software Library) is a comprehensive library of analysis tools for functional, structural and diffusion MRI brain imaging data, written mainly by members of the Analysis Group, FMRIB, Oxford. For this NeuroImage special issue on "20 years of fMRI" we have been asked to write about the history, developments and current status of FSL. We also include some descriptions of parts of FSL that are not well covered in the existing literature. We hope that some of this content might be of interest to users of FSL, and also maybe to new research groups considering creating, releasing and supporting new software packages for brain image analysis.

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Authors: Jenkinson, M., Beckmann, C. F., Behrens, T. E. J., Woolrich, M. W., & Smith, S. M.
Affiliations: University of Oxford (GB)
Corresponding author: Jenkinson, Mark
ORCID: Jenkinson, Mark
Beckmann, Christian F.
Behrens, Timothy E.J.
Woolrich, Mark W.
Smith, Stephen M.
Venue: NeuroImage
Publisher: Elsevier BV
Published: 2012-08
Volume: 62
Issue: 2
Pages: 782-790
ISSN: 1053-8119 (ISSN-L)
DOI: 10.1016/j.neuroimage.2011.09.015
OpenAlex: W2977883299
Cited by: 11,314
References: 18
Citations by year: 2026: 995 · 2025: 1331 · 2024: 1189 · 2023: 1077 · 2022: 1062 · 2021: 1090 · 2020: 1024 · 2019: 827 · 2018: 713 · 2017: 592 · 2016: 531 · 2015: 456 · 2014: 269 · 2013: 142 · 2012: 10
FWCI: 102.30
Type: journal article
Language: en
Open access: bronze
doi.org
Licence: www.elsevier.com/tdm/userlicense/1.0/ (tdm)
Locations: NeuroImage (publishedVersion)
PubMed (publishedVersion)
HAL (submittedVersion, other-oa)
Funders: Engineering and Physical Sciences Research Council (EP/F05727X/1)
Topics: Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced MRI Techniques and Applications
Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
Keywords: FSL, functional MRI, structural MRI, diffusion MRI, software development history, open source software
MeSH terms: Brain, Brain Mapping, Humans, Image Processing, Computer-Assisted, Software, Diffusion Magnetic Resonance Imaging, History, 20th Century, History, 21st Century

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