The language of covalent histone modifications
DOI 10.1038/47412
Cited by (215)
Items 101–200 of 215
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- Pimelic Diphenylamide 106 Is a Slow, Tight-binding Inhibitor of Class I Histone DeacetylasesChou, C. James, Herman, David, Gottesfeld, Joel M. · 2008 · Journal of Biological Chemistry
- A Paradigm for Gene Regulation: Inflammation, NF-κB and PPARVanden Berghe, Wim, Vermeulen, Linda, Delerive, Philippe, De Bosscher, Karolien, Staels, Bart, Haegeman, Guy · 2003 · Advances in experimental medicine and biology
- Intrinsically disordered proteins play diverse roles in cell signalingBondos, Sarah E., Dunker, A. Keith, Uversky, Vladimir N. · 2022 · Cell Communication and Signaling
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- Allosteric post-translational modification codesNussinov, Ruth, Tsai, Chung-Jung, Xin, Fuxiao, Radivojac, Predrag · 2012 · Trends in Biochemical Sciences
- hTERT Is Expressed in Cancer Cell Lines Despite Promoter DNA Methylation by Preservation of Unmethylated DNA and Active Chromatin around the Transcription Start SiteZinn, Rebekah L., Pruitt, Kevin, Eguchi, Sayaka, Baylin, Stephen B., Herman, James G. · 2007 · Cancer Research
- The RING domain of Mdm2 mediates histone ubiquitylation and transcriptional repressionMinsky, Neri, Oren, Moshe · 2004 · Molecular Cell
- The Drosophila heterochromatic gene encoding poly(ADP-ribose) polymerase (PARP) is required to modulate chromatin structure during developmentTulin, Alexei, Stewart, Dianne, Spradling, Allan C. · 2002 · Genes & Development
- Epigenetic mechanisms in anti-cancer actions of bioactive food components—the implications in cancer preventionStefanska, B, Karlic, H, Varga, F, Fabianowska‐Majewska, K, Haslberger, AG · 2012 · British Journal of Pharmacology
- ERK Activation Following Macrophage FcγR Ligation Leads to Chromatin Modifications at the IL-10 LocusLucas, Mark, Zhang, Xia, Prasanna, Vikram, Mosser, David M · 2005 · The Journal of Immunology
- Epigenetic changes to the MDR1 locus in response to chemotherapeutic drugsBaker, Emma K, Johnstone, Ricky W, Zalcberg, John R, El-Osta, Assam · 2005 · Oncogene
- In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylationVerschure, Pernette J., van der Kraan, Ineke, de Leeuw, Wim, van der Vlag, Johan, Carpenter, Anne E., Belmont, Andrew S., van Driel, Roel · 2005 · Molecular and Cellular Biology
- Isolation and Characterization of Mammalian HDAC10, a Novel Histone DeacetylaseKao, Hung-Ying, Lee, Chih-Hao, Komarov, Andrei, Han, Chris C., Evans, Ronald M. · 2002 · Journal of Biological Chemistry
- Distinguishing Hyperglycemic Changes by Set7 in Vascular Endothelial CellsOkabe, Jun, Orlowski, Christian, Balcerczyk, Aneta, Tikellis, Chris, Thomas, Merlin C., Cooper, Mark E., El-Osta, Assam · 2012 · Circulation Research
- Epigenetic signaling in psychiatric disorders: stress and depressionBagot, Rosemary C., Labonté, Benoit, Peña, Catherine J., Nestler, Eric J. · 2014 · Dialogues in Clinical Neuroscience
- Is there a future for histone deacetylase inhibitors in the pharmacotherapy of psychiatric disordersGrayson, Dennis R., Kundakovic, Marija, Sharma, Rajiv P. · 2010 · Molecular Pharmacology
- Choline deficiency alters global histone methylation and epigenetic marking at the Rel site of the calbindin 1 geneMehedint, Mihai G., Niculescu, Mihai D., Craciunescu, Corneliu N., Zeisel, Steven H. · 2010 · The FASEB Journal
- Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cellsPhanstiel, Doug, Brumbaugh, Justin, Berggren, W. Travis, Conard, Kevin, Feng, Xuezhu, Levenstein, Mark E., McAlister, Graeme C., Thomson, James A., Coon, Joshua J. · 2008 · Proceedings of the National Academy of Sciences
- Infant exposure to lead (Pb) and epigenetic modifications in the aging primate brain: implications for Alzheimer’s diseaseBihaqi, Syed Waseem, Huang, Hui, Wu, Jinfang, Zawia, Nasser H. · 2011 · Journal of Alzheimer’s Disease
- KDM7 is a dual demethylase for histone H3 Lys 9 and Lys 27 and functions in brain developmentTsukada, Yu-ichi, Ishitani, Tohru, Nakayama, Keiichi I. · 2010 · Genes & Development
- N6-Methyladenosine: a conformational marker that regulates the substrate specificity of human demethylases FTO and ALKBH5Zou, Shui, Toh, Joel D. W., Wong, Kendra H. Q., Gao, Yong-Gui, Hong, Wanjin, Woon, Esther C. Y. · 2016 · Scientific Reports
- YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancerMi, Wenyi, Guan, Haipeng, Lyu, Jie, Zhao, Dan, Xi, Yuanxin, Jiang, Shiming, Andrews, Forest H., Wang, Xiaolu, Gagea, Mihai, Wen, Hong et al. · 2017 · Nature Communications
- Dual Requirement of CHD8 for Chromatin Landscape Establishment and Histone Methyltransferase Recruitment to Promote CNS Myelination and RepairZhao, Chuntao, Dong, Chen, Frah, Magali, Deng, Yaqi, Marie, Corentine, Zhang, Feng, Xu, Lingli, Ma, Zhixing, Dong, Xinran, Lin, Yifeng et al. · 2018 · Developmental Cell
- Intrinsically disordered proteins and multicellular organismsDunker, A. Keith, Bondos, Sarah E., Huang, Fei, Oldfield, Christopher J. · 2015 · Seminars in Cell & Developmental Biology
- Histone deacetylases (HDACs) and brain functionVolmar, Claude-Henry, Wahlestedt, Claes · 2015 · Neuroepigenetics
- Steroidogenic Acute Regulatory ProteinChristenson, Lane K, Strauss, Jerome F · 2001 · Archives of Medical Research
- Genetic and epigenetic regulation of human aging and longevityMorris, Brian J., Willcox, Bradley J., Donlon, Timothy A. · 2019 · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
- Cloning and characterization of human histone deacetylase 8Van den Wyngaert, Ilse, de Vries, Winfred, Kremer, Andreas, Neefs, Jean-Marc, Verhasselt, Peter, Luyten, Walter H.M.L., Kass, Stefan U. · 2000 · FEBS Letters
- Epigenetics, hippocampal neurogenesis, and neuropsychiatric disorders: Unraveling the genome to understand the mindHsieh, Jenny, Eisch, Amelia J. · 2010 · Neurobiology of Disease
- DAMPs, ageing, and cancer: The ‘DAMP Hypothesis’Huang, Jin, Xie, Yangchun, Sun, Xiaofang, Zeh, Herbert J., Kang, Rui, Lotze, Michael T., Tang, Daolin · 2015 · Ageing Research Reviews
- Epigenetic flexibility in metabolic regulation: disease cause and preventionKirchner, Henriette, Osler, Megan E., Krook, Anna, Zierath, Juleen R. · 2013 · Trends in Cell Biology
- Hypoxia induces trimethylated H3 lysine 4 by inhibition of JARID1A demethylaseZhou, Xue, Sun, Hong, Chen, Haobin, Zavadil, Jiri, Kluz, Thomas, Arita, Adriana, Costa, Max · 2010 · Cancer Research
- Childhood adversity and DNA methylation of genes involved in the hypothalamus-pituitary-adrenal axis and immune system: whole-genome and candidate-gene associationsBick, Johanna, Naumova, Oksana, Hunter, Scott, Barbot, Baptiste, Lee, Maria, Luthar, Suniya S., Raefski, Adam, Grigorenko, Elena L. · 2012 · Development and Psychopathology
- Genome-wide analysis of histone modifications in human pancreatic isletsBhandare, Reena, Schug, Jonathan, Le Lay, John, Fox, Alan, Smirnova, Olga, Liu, Chengyang, Naji, Ali, Kaestner, Klaus H. · 2010 · Genome Research
- Stress-Dependent Dynamics of Global Chromatin Remodeling in Yeast: Dual Role for SWI/SNF in the Heat Shock Stress ResponseShivaswamy, Sushma, Iyer, Vishwanath R. · 2008 · Molecular and Cellular Biology
- Regulation of chromatin structure in memory formationRoth, Tania L, Sweatt, J David · 2009 · Current Opinion in Neurobiology
- Genome-Wide Survey and Developmental Expression Mapping of Zebrafish SET Domain-Containing GenesSun, Xiao-Jian, Xu, Peng-Fei, Zhou, Ting, Hu, Ming, Fu, Chun-Tang, Zhang, Yong, Jin, Yi, Chen, Yi, Chen, Sai-Juan, Huang, Qiu-Hua et al. · 2008 · PLoS ONE
- Acetate reduces microglia inflammatory signaling in vitroSoliman, Mahmoud L., Puig, Kendra L., Combs, Colin K., Rosenberger, Thad A. · 2012 · Journal of Neurochemistry
- Rb family proteins as modulators of gene expression and new aspects regarding the interaction with chromatin remodeling enzymesMacaluso, M, Montanari, M, Giordano, A · 2006 · Oncogene
- At the frontier of epigenetics of brain sex differencesMcCarthy, Margaret M., Nugent, Bridget M. · 2015 · Frontiers in Behavioral Neuroscience
- The histone methyltransferase Dot1/DOT1L as a critical regulator of the cell cycleKim, Wootae, Choi, Minji, Kim, Ja-Eun · 2014 · Cell Cycle
- SAHA Enhances Synaptic Function and Plasticity In Vitro but Has Limited Brain Availability In Vivo and Does Not Impact CognitionHanson, Jesse E., La, Hank, Plise, Emile, Chen, Yung-Hsiang, Ding, Xiao, Hanania, Taleen, Sabath, Emily V., Alexandrov, Vadim, Brunner, Dani, Leahy, Emer et al. · 2013 · PLoS ONE
- Human class I histone deacetylase complexes show enhanced catalytic activity in the presence of ATP and co-immunoprecipitate with the ATP-dependent chaperone protein Hsp70Johnson, Colin A., White, Darren A., Lavender, Jayne S., O'Neill, Laura P., Turner, Bryan M. · 2002 · Journal of Biological Chemistry
- Primary hepatocyte cultures for pharmaco-toxicological studies: at the busy crossroad of various anti-dedifferentiation strategiesFraczek, J., Bolleyn, J., Vanhaecke, T., Rogiers, V., Vinken, M. · 2013 · Archives of Toxicology
- Chromatin Decondensation and Nuclear Reprogramming by NucleoplasminTamada, Hiroshi, Thuan, Nguyen Van, Reed, Peter, Nelson, Dominic, Katoku-Kikyo, Nobuko, Wudel, Justin, Wakayama, Teruhiko, Kikyo, Nobuaki · 2006 · Molecular and Cellular Biology
- Strategy for “Detoxification” of a Cancer-Derived Histone Mutant Based on Mapping Its Interaction with the Methyltransferase PRC2Brown, Zachary Z., Müller, Manuel M., Jain, Siddhant U., Allis, C. David, Lewis, Peter W., Muir, Tom W. · 2014 · Journal of the American Chemical Society
- Hippocampal histone acetylation regulates object recognition and the estradiol-induced enhancement of object recognitionZhao, Zaorui, Fan, Lu, Fortress, Ashley M., Boulware, Marissa I., Frick, Karyn M. · 2012 · The Journal of Neuroscience
- CaMK activation during exercise is required for histone hyperacetylation and MEF2A binding at the MEF2 site on the Glut4 geneSmith, James A. H., Kohn, Tertius A., Chetty, Ashley K., Ojuka, Edward O. · 2008 · American Journal of Physiology-Endocrinology and Metabolism
- Trichostatin A, a Histone Deacetylase Inhibitor, Suppresses Collagen Synthesis and Prevents TGF-β1-Induced Fibrogenesis in Skin FibroblastsRombouts, K · 2002 · Experimental Cell Research
- Blood biomarkers and treatment response in major depressionMora, Cristina, Zonca, Valentina, Riva, Marco A., Cattaneo, Annamaria · 2018 · Expert Review of Molecular Diagnostics
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- RIP140 directs histone and DNA methylation to silence Ucp1 expression in white adipocytesKiskinis, Evangelos, Hallberg, Magnus, Christian, Mark, Olofsson, Martina, Dilworth, Stephen M, White, Roger, Parker, Malcolm G · 2007 · The EMBO Journal
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- Histone dynamics in living cells revealed by photobleachingKimura, Hiroshi · 2005 · DNA Repair
- Retracted: Ligand‐induced transrepression by VDR through association of WSTF with acetylated histonesFujiki, Ryoji, Kim, Mi‐sun, Sasaki, Yasumasa, Yoshimura, Kimihiro, Kitagawa, Hirochika, Kato, Shigeaki · 2005 · The EMBO Journal · Retracted
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- Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-proZhang, Bingjie, Srivastava, Avi, Mimitou, Eleni, Stuart, Tim, Raimondi, Ivan, Hao, Yuhan, Smibert, Peter, Satija, Rahul · 2022 · Nature Biotechnology
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- Endometriosis is characterized by a distinct pattern of histone 3 and histone 4 lysine modificationsMonteiro, Janice B., Colón-Díaz, Maricarmen, García, Miosotis, Gutierrez, Sylvia, Colón, Mariano, Seto, Edward, Laboy, Joaquin, Flores, Idhaliz · 2014 · Reproductive Sciences
- Histone methylation and ubiquitination with their cross-talk and roles in gene expression and stabilityShukla, A., Chaurasia, P., Bhaumik, S. R. · 2009 · Cellular and Molecular Life Sciences
- IKKα Causes Chromatin Modification on Pro-Inflammatory Genes by Cigarette Smoke in Mouse LungYang, Se-Ran, Valvo, Samantha, Yao, Hongwei, Kode, Aruna, Rajendrasozhan, Saravanan, Edirisinghe, Indika, Caito, Samuel, Adenuga, David, Henry, Ryan, Fromm, George et al. · 2008 · American Journal of Respiratory Cell and Molecular Biology
- Gcn5 Is Required for PU.1-Dependent IL-9 Induction in Th9 CellsGoswami, Ritobrata, Kaplan, Mark H · 2012 · The Journal of Immunology
- Antidepressant action of HDAC inhibition in the prefrontal cortexCovington, H.E., Maze, I., Vialou, V., Nestler, E.J. · 2015 · Neuroscience
- Mechanisms of transgenerational inheritance of addictive-like behaviorsVassoler, F.M., Sadri-Vakili, G. · 2014 · Neuroscience
- Histone Core Phosphorylation Regulates DNA AccessibilityBrehove, Matthew, Wang, Tao, North, Justin, Luo, Yi, Dreher, Sarah J., Shimko, John C., Ottesen, Jennifer J., Luger, Karolin, Poirier, Michael G. · 2015 · Journal of Biological Chemistry
- Intrinsically Disordered Proteins Link Alternative Splicing and Post-translational Modifications to Complex Cell Signaling and RegulationZhou, Jianhong, Zhao, Suwen, Dunker, A. Keith · 2018 · Journal of Molecular Biology
- Histone deacetylases in fungi: novel members, new factsTrojer, P. · 2003 · Nucleic Acids Research
- Modulation of inflammatory cytokines and mitogen-activated protein kinases by acetate in primary astrocytesSoliman, Mahmoud L., Combs, Colin K., Rosenberger, Thad A. · 2013 · Journal of Neuroimmune Pharmacology
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- Distinct Mechanisms Involving Diverse Histone Deacetylases Repress Expression of the Two Gonadotropin β-Subunit Genes in Immature Gonadotropes, and Their Actions Are Overcome by Gonadotropin-Releasing HormoneLim, Stefan, Luo, Min, Koh, Mingshi, Yang, Meng, bin Abdul Kadir, Mohammed Nizam, Tan, Jing Hui, Ye, Zhiyong, Wang, Wen, Melamed, Philippa · 2007 · Molecular and Cellular Biology
- Nuclear Factor κB-Dependent Histone Acetylation is Specifically Involved in Persistent Forms of MemoryFederman, Noel, de la Fuente, Verónica, Zalcman, Gisela, Corbi, Nicoletta, Onori, Annalisa, Passananti, Claudio, Romano, Arturo · 2013 · The Journal of Neuroscience
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- Selective degradation of BET proteins with dBET1, a proteolysis-targeting chimera, potently reduces pro-inflammatory responses in lipopolysaccharide-activated microgliaDeMars, Kelly M., Yang, Changjun, Castro-Rivera, Carolina I., Candelario-Jalil, Eduardo · 2018 · Biochemical and Biophysical Research Communications
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- Mass Spectrometric Analysis of Histone ProteoformsYuan, Zuo-Fei, Arnaudo, Anna M., Garcia, Benjamin A. · 2014 · Annual Review of Analytical Chemistry
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