Mitochondrial reactive oxygen species regulate cellular signaling and dictate biological outcomes
Open accessAbstract
Reactive oxygen species (ROS) have historically been viewed as toxic metabolic byproducts and causal agents in a myriad of human pathologies. More recent work, however, indicates that ROS are critical intermediates of cellular signaling pathways. Although it is clear that dedicated cellular ROS producers such as NADPH oxidases participate in signaling, evidence suggests that mitochondrial production of ROS is also a tightly controlled process, and plays a role in the maintenance of cellular oxidative homeostasis and propagation of cellular signaling pathways. Production of ROS at mitochondria thus integrates cellular energy state, metabolite concentrations, and other upstream signaling events and has important implications in cellular stress signaling, maintenance of stem cell populations, cellular survival, and oncogenic transformation.
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TL;DR
This review argues that mitochondrial reactive oxygen species (ROS) are not merely toxic byproducts but regulated signaling intermediates that influence hypoxia responses, PI3K/Akt/FOXO signaling, stem cell maintenance, TNFα/NF-κB-mediated death, and oncogenic transformation. It proposes a hormetic model in which low ROS support proliferation/differentiation, moderate stress-induced ROS promote adaptation, and very high ROS cause senescence or death.
Key findings
- Mitochondrial ROS are produced mainly as superoxide from electron transport chain complexes I, II, and III; complex III can release ROS on both sides of the inner membrane, and estimates suggest 0.15%–2% of cellular oxygen consumption results in superoxide in vitro, though in vivo production is unknown.
- Hypoxia increases mitochondrial ROS, especially from complex III, and this ROS is required for HIF stabilization, AMPK/PKCζ-mediated Na/K-ATPase endocytosis, and pulmonary artery vasoconstriction; Na/K-ATPase can account for 20–80% of oxygen expenditure in mammalian cells.
- PI3K-Akt activation increases mitochondrial ROS and inhibits FOXO-dependent expression of SOD2 and catalase, while FOXO activity supports antioxidant defense, stem cell maintenance, and protection against cardiac hypertrophy.
- Mitochondrial ROS contribute to transformation: Sirt3−/− fibroblasts accumulate mitochondrial ROS and become transformed with either Myc or Ras alone, whereas wild-type cells require both oncogenes; SOD2 expression inhibits this transformation.
Methods
- Narrative review synthesizing published literature on mitochondrial ROS production and ROS-dependent signaling pathways.
- No primary experimental data are presented; the paper discusses studies in cell lines, mouse models, Drosophila, and C. elegans.
- Main analysis is conceptual synthesis, including a proposed hormetic model of mitochondrial ROS in cellular and organismal fitness.
Limitations
- The paper states that in many pathways direct biochemical evidence for ROS involvement has yet to be provided, and that little is known about mitochondrial function and superoxide production in vivo.
- The paper states that the mechanism of hypoxic induction of mitochondrial ROS remains unclear, including whether it is intrinsic to mitochondria or requires other cellular factors.
- As evident from the text, this is a review rather than a systematic review or primary study, so it does not provide new quantitative data or formal risk-of-bias assessment.
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0 of 167 cited sources checked · 0 supported · 0 flagged
- Interpretationnone given§ Mitochondrial reactive oxygen species regulate cellular signaling and dictate biological outcomes
Mitochondrial production of ROS is a tightly controlled process.
“evidence suggests that mitochondrial production of ROS is also a tightly controlled process”
Quote in the paperNot a substantial claim - Premisecitation
Between 0.15% and 2% of cellular oxygen consumption results in superoxide, based on in vitro measurements.
“Several groups have measured the rate of mitochondrial superoxide production in vitro, leading to the estimation that between 0.15% and 2% of cellular oxygen consumption results in superoxide 2, 5.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [2] Murphy, 2009, How mitochondria produce reactive oxygen species, Biochem. J. source
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- cites [5] Brand, M.D. The sites and topology of mitochondrial superoxide production. Exp Gerontol, in press
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- Premisecitation
For a given cell, the rate of ROS production from the electron transport chain varies with the amount of electron carriers present in a state capable of reacting with O2.
“For a given cell, the rate of ROS production from the electron transport chain varies with the amount of electron carriers present in a state capable of reacting with O2.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [2] Murphy, 2009, How mitochondria produce reactive oxygen species, Biochem. J. source
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- Interpretationnone given§ Mitochondrial reactive oxygen species regulate cellular signaling and dictate biological outcomes
Production of ROS at mitochondria integrates cellular energy state, metabolite concentrations, and other upstream signaling events.
“Production of ROS at mitochondria thus integrates cellular energy state, metabolite concentrations, and other upstream signaling events”
Quote in the paperNot a substantial claim - Premisecitation
Hypoxia leads to an increase in mitochondrial production of ROS.
“Paradoxically, hypoxia leads to an increase in mitochondrial production of ROS.”
Quote in the paperSubstantial claim0 of 7 sources checked- cites [8] Chandel, 1998, Mitochondrial reactive oxygen species trigger hypoxia-induced transcription, Proc. Natl. Acad. Sci. U. S. A. source
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- cites [9] Waypa, 2001, Model for hypoxic pulmonary vasoconstriction involving mitochondrial oxygen sensing, Circ. Res. source
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- cites [10] Bell, 2007, Mitochondrial reactive oxygen species trigger hypoxia-inducible factor-dependent extension of the replicative life span during hypoxia, Mol. Cell. Biol. source
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- cites [11] Chandel, 2000, Reactive oxygen species generated at mitochondrial complex III stabilize hypoxia-inducible factor-1alpha during hypoxia: a mechanism of O2 sensing, J. Biol. Chem. source
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- cites [12] Dada, 2003, Hypoxia-induced endocytosis of Na,K-ATPase in alveolar epithelial cells is mediated by mitochondrial reactive oxygen species and PKC-zeta, J. Clin. Invest. source
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- cites [13] Emerling, 2009, Hypoxic activation of AMPK is dependent on mitochondrial ROS but independent of an increase in AMP/ATP ratio, Free Radic. Biol. Med. source
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- cites [14] Waypa, 2006, Increases in mitochondrial reactive oxygen species trigger hypoxia-induced calcium responses in pulmonary artery smooth muscle cells, Circ. Res. source
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- Interpretationcitation
H2O2 emission from mitochondria during hypoxia is a central upstream regulator of many cellular responses to hypoxia.
“Current evidence suggests that this H2O2 emission from mitochondria during hypoxia is a central upstream regulator of many of the cellular responses to hypoxia 8–14.”
Quote in the paperSubstantial claim0 of 7 sources checked- cites [8] Chandel, 1998, Mitochondrial reactive oxygen species trigger hypoxia-induced transcription, Proc. Natl. Acad. Sci. U. S. A. source
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- cites [9] Waypa, 2001, Model for hypoxic pulmonary vasoconstriction involving mitochondrial oxygen sensing, Circ. Res. source
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- cites [10] Bell, 2007, Mitochondrial reactive oxygen species trigger hypoxia-inducible factor-dependent extension of the replicative life span during hypoxia, Mol. Cell. Biol. source
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- cites [11] Chandel, 2000, Reactive oxygen species generated at mitochondrial complex III stabilize hypoxia-inducible factor-1alpha during hypoxia: a mechanism of O2 sensing, J. Biol. Chem. source
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- cites [12] Dada, 2003, Hypoxia-induced endocytosis of Na,K-ATPase in alveolar epithelial cells is mediated by mitochondrial reactive oxygen species and PKC-zeta, J. Clin. Invest. source
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- cites [13] Emerling, 2009, Hypoxic activation of AMPK is dependent on mitochondrial ROS but independent of an increase in AMP/ATP ratio, Free Radic. Biol. Med. source
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- cites [14] Waypa, 2006, Increases in mitochondrial reactive oxygen species trigger hypoxia-induced calcium responses in pulmonary artery smooth muscle cells, Circ. Res. source
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- Premisecitation
Complex III can produce ROS on both sides of the mitochondrial inner membrane.
“complex III can produce ROS on both sides of the mitochondrial inner membrane 1, 3”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
Complexes I and II produce ROS only into the mitochondrial matrix.
“Although complexes I and II produce ROS only into the matrix”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
The cellular response to hypoxia requires induction of hypoxia inducible transcription factors.
“The cellular response to hypoxia requires the induction of the hypoxia inducible transcription factors (HIFs)”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [15] Weidemann, 2008, Biology of HIF-1alpha, Cell Death Differ. source
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- Interpretationcitation
ROS produced into the intermembrane space theoretically have an easier route to the cytosol to act as signaling molecules than do ROS produced into the matrix.
“ROS produced into the intermembrane space theoretically have an easier route to the cytosol to act as signaling molecules than do ROS produced into the matrix 4.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [4] Han, 2003, Voltage-dependent anion channels control the release of the superoxide anion from mitochondria to cytosol, J. Biol. Chem. source
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- Premisecitation
Complexes I, II, and III of the electron transport chain contain sites where electrons can prematurely reduce oxygen, resulting in superoxide formation.
“Complexes I, II, and III of the electron transport chain contain sites wherein electrons can prematurely reduce oxygen, resulting in the formation of superoxide 1, 2.”
Quote in the paperSubstantial claim0 of 2 sources checked - Interpretationcitation§ Mitochondrial reactive oxygen species regulate cellular signaling and dictate biological outcomes
Reactive oxygen species are critical intermediates of cellular signaling pathways.
“More recent work, however, indicates that ROS are critical intermediates of cellular signaling pathways.”
Quote in the paperSubstantial claim - Premisereasoning
Superoxide is the proximal ROS produced by mitochondria.
“Superoxide is the proximal ROS produced by mitochondria”
Quote in the paperNot a substantial claim - Premisecitation
Non-respiratory chain enzymes, including glycerol-3-phosphate dehydrogenase, produce superoxide in mitochondria.
“There are other non-respiratory chain enzymes that produce superoxide in mitochondria, including glycerol-3-phosphate dehydrogenase”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [2] Murphy, 2009, How mitochondria produce reactive oxygen species, Biochem. J. source
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- cites [5] Brand, M.D. The sites and topology of mitochondrial superoxide production. Exp Gerontol, in press
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- Premisecitation
During hypoxia, HIF-α subunits become stabilized, allowing transcriptional transactivation and expression of genes regulating erythropoiesis, glycolysis, angiogenesis, cell cycle, and survival.
“During hypoxia, the normally degraded HIF-α subunits become stabilized, allowing for transcriptional transactivation and expression of genes regulating erythropoiesis, glycolysis, angiogenesis, cell cycle, and survival 15.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [15] Weidemann, 2008, Biology of HIF-1alpha, Cell Death Differ. source
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- Premisecitation
The rate of ROS production from the electron transport chain is affected by the concentration of a given electron carrier and by the rate of electron supply and release from each carrier.
“This is affected by the concentration of a given electron carrier in a cell as well as the rate of electron supply and release from each carrier 2.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [2] Murphy, 2009, How mitochondria produce reactive oxygen species, Biochem. J. source
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- Premisecitation
ρ0 Hep3B cells are incapable of HIF-mediated transcription during hypoxia due to a lack of HIF-α subunit stabilization.
“moreover, they are incapable of HIF-mediated transcription during hypoxia due to a lack of HIF-α subunit stabilization 8.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [8] Chandel, 1998, Mitochondrial reactive oxygen species trigger hypoxia-induced transcription, Proc. Natl. Acad. Sci. U. S. A. source
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- Premisecitation
FOXO-mediated transcription is activated upon cellular stress, including oxidative stress, via phosphorylation events mediated by JNK, MST1, or AMPK.
“FOXO-mediated transcription is activated upon cellular stress, including oxidative stress, via phosphorylation events mediated by JNK (c-Jun N-terminal kinase), MST1 (mammalian Sterile20-like 1), or AMPK 34.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [34] Hedrick, 2009, The cunning little vixen: Foxo and the cycle of life and death, Nat. Immunol. source
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- Premisecitation
Mitochondrial ROS production triggers AMPK activation during hypoxia.
“Mitochondrial ROS production triggers AMPK activation during hypoxia, providing a link between ROS and Na/K-ATPase inhibition 13, 23.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [13] Emerling, 2009, Hypoxic activation of AMPK is dependent on mitochondrial ROS but independent of an increase in AMP/ATP ratio, Free Radic. Biol. Med. source
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- cites [23] Gusarova, 2009, Alpha1-AMP-activated protein kinase regulates hypoxia-induced Na,K-ATPase endocytosis via direct phosphorylation of protein kinase C zeta, Mol. Cell. Biol. source
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- Premisereasoning
Hypoxic generation of ROS at mitochondrial complex III occurs through the Q-cycle.
“Hypoxic generation of ROS at mitochondrial complex III occurs through a process termed the Q-cycle.”
Quote in the paperSubstantial claim - Premisereasoning
Because coenzyme Q accepts two electrons and cytochrome c accepts only one, complex III must sequentially remove each electron from reduced coenzyme Q.
“Whereas coenzyme Q accepts two electrons from either complex I or II, cytochrome c is only capable of reduction with one electron. Thus complex III must sequentially remove each electron from reduced coenzyme Q (ubiquinol, QH2).”
Quote in the paperSubstantial claim - Interpretationcitation
HIF stabilization afforded by mitochondrial ROS is a result of PHD inhibition.
“HIF stabilization afforded by mitochondrial ROS is a result of PHD inhibition”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [20] Bell, 2007, The Qo site of the mitochondrial complex III is required for the transduction of hypoxic signaling via reactive oxygen species production, J. Cell Biol. source
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- Premisecitation
During hypoxia, AMPK phosphorylates and activates the tuberous sclerosis complex.
“In addition to regulating the Na/K-ATPase, AMPK phosphorylates and activates the tuberous sclerosis complex during hypoxia.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [24] Liu, 2006, Hypoxia-induced energy stress regulates mRNA translation and cell growth, Mol. Cell source
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- Premisecitation
Hypoxia-induced Na/K-ATPase endocytosis requires the activity of AMP-activated protein kinase.
“Hypoxia-induced Na/K-ATPase endocytosis requires the activity of AMP-activated protein kinase (AMPK) 23.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [23] Gusarova, 2009, Alpha1-AMP-activated protein kinase regulates hypoxia-induced Na,K-ATPase endocytosis via direct phosphorylation of protein kinase C zeta, Mol. Cell. Biol. source
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- Premisecitation
PKCζ phosphorylates Na/K-ATPase α-subunits on serine-18, leading to endocytosis of the complex.
“which then phosphorylates Na/K-ATPase α-subunits on serine-18, leading to endocytosis of the complex 12.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [12] Dada, 2003, Hypoxia-induced endocytosis of Na,K-ATPase in alveolar epithelial cells is mediated by mitochondrial reactive oxygen species and PKC-zeta, J. Clin. Invest. source
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- Premisecitation
Akt phosphorylates FOXO transcription factors on three conserved residues, resulting in cytosolic sequestration through interaction with 14-3-3 adaptor proteins.
“Akt phosphorylates forkhead box O (FOXO) transcription factors on three conserved residues, resulting in cytosolic sequestration through interaction with 14-3-3 adaptor proteins 34.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [34] Hedrick, 2009, The cunning little vixen: Foxo and the cycle of life and death, Nat. Immunol. source
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- Premisecitation
Exposure of cells to hypoxia reversibly suppresses Na/K-ATPase activity via a mitochondrial ROS-mediated process that promotes rapid endocytosis of this protein complex.
“Exposure of cells to hypoxia reversibly suppresses Na/K-ATPase activity via a mitochondrial ROS-mediated process that promotes the rapid endocytosis of this protein complex 12.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [12] Dada, 2003, Hypoxia-induced endocytosis of Na,K-ATPase in alveolar epithelial cells is mediated by mitochondrial reactive oxygen species and PKC-zeta, J. Clin. Invest. source
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- Premisecitation
Hypoxia triggers contraction of pulmonary artery smooth muscle cells through an increase in cytosolic calcium from both intracellular and extracellular stores.
“Hypoxia triggers contraction of pulmonary artery smooth muscle cells through an increase in cytosolic calcium from both intracellular and extracellular stores 25.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [25] Ward, 2004, Calcium, mitochondria and oxygen sensing in the pulmonary circulation, Cell Calcium source
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- Interpretationreasoning
The cellular response to hypoxia requires mitochondrial generation of ROS to propagate signaling events that regulate transcription, calcium stores, and energy stores at the cellular level.
“Thus, the cellular response to hypoxia requires the mitochondrial generation of ROS to propagate signaling events that regulate transcription, calcium stores, and energy stores at the cellular level.”
Quote in the paperSubstantial claim - Premisecitation
Akt activation is associated with the accumulation of mitochondrial ROS.
“Akt activation is also associated with the accumulation of mitochondrial ROS 31.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31] Nogueira, 2008, Akt determines replicative senescence and oxidative or oncogenic premature senescence and sensitizes cells to oxidative apoptosis, Cancer Cell source
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- Premisecitation
Rapamycin-mediated inhibition of mTOR activity results in reduced oxygen consumption and oxidative capacity.
“Conversely, rapamycin-mediated inhibition of mTOR activity results in reduced oxygen consumption and oxidative capacity 29.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [29] Schieke, 2006, The mammalian target of rapamycin (mTOR) pathway regulates mitochondrial oxygen consumption and oxidative capacity, J. Biol. Chem. source
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- Interpretationcitation
Hypoxic downregulation of Na/K-ATPase activity has important implications for airway fluid absorption during hypoxia.
“Thus, hypoxic downregulation of Na/K-ATPase activity has important implications for airway fluid absorption during hypoxia 22.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [22] Zhou, 2008, Regulation of alveolar epithelial function by hypoxia, Eur. Respir. J. source
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- Premisecitation
FOXOs robustly regulate the expression of mitochondrial manganese superoxide dismutase (SOD2) and catalase.
“Of note, FOXOs robustly regulate the expression of mitochondrial manganese superoxide dismutase (SOD2) and catalase 35, 36.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [35] Kops, 2002, Forkhead transcription factor FOXO3a protects quiescent cells from oxidative stress, Nature source
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- cites [36] Nemoto, 2002, Redox regulation of forkhead proteins through a p66shc-dependent signaling pathway, Science source
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- Premisecitation
During hypoxia, AMPK phosphorylates and activates protein kinase C zeta.
“During hypoxia, AMPK phosphorylates and activates protein kinase C zeta (PKCζ) 23”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [23] Gusarova, 2009, Alpha1-AMP-activated protein kinase regulates hypoxia-induced Na,K-ATPase endocytosis via direct phosphorylation of protein kinase C zeta, Mol. Cell. Biol. source
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- Premisereasoning
Removal of the first electron from ubiquinol results in formation of the radical ubisemiquinone.
“Removal of the first electron of ubiquiol results in the formation of the radical ubisemiquinone (QH•).”
Quote in the paperSubstantial claim - Premisereasoning
During hypoxia, PHD activity is inhibited, allowing stabilization of HIF-α subunits.
“During hypoxia, PHD activity is inhibited, allowing for stabilization of HIF-α subunits.”
Quote in the paperSubstantial claim - Premisecitation
Normoxic turnover of HIF-α subunits requires proline-directed hydroxylation that targets them for recognition by the von Hippel-Lindau tumor suppressor protein and subsequent proteasomal degradation.
“The normoxic turnover of HIF-α subunits requires proline-directed hydroxylation of HIF-α subunits that targets them for recognition by the von Hippel-Lindau tumor suppressor protein and subsequent proteasomal degradation 16.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [16] Kaelin, 2008, Oxygen sensing by metazoans: the central role of the HIF hydroxylase pathway, Mol. Cell source
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- Premisecitation
The ability of complex III to pump protons or to participate in oxidative phosphorylation is not required for ROS generation at this complex.
“Later work demonstrated that the ability of complex III to pump protons or to participate in oxidative phosphorylation is not required for ROS generation at this complex.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [20] Bell, 2007, The Qo site of the mitochondrial complex III is required for the transduction of hypoxic signaling via reactive oxygen species production, J. Cell Biol. source
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- Interpretationcitation
Mitochondrial ROS are required for hypoxia-mediated HIF stabilization.
“The requirement of mitochondrial ROS for hypoxia-mediated HIF stabilization was first suggested by studies in ρ0 Hep3B cells.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [8] Chandel, 1998, Mitochondrial reactive oxygen species trigger hypoxia-induced transcription, Proc. Natl. Acad. Sci. U. S. A. source
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- Premisecitation
The Na/K-ATPase can account for 20-80% of oxygen expenditure in mammalian cells.
“A major consumer of cellular ATP is the Na/K-ATPase, which can account for 20–80% of oxygen expenditure in mammalian cells 21.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [21] Michiels, 2004, Physiological and pathological responses to hypoxia, Am. J. Pathol. source
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- Premisecitation
In the absence of NF-κB, JNK activation is greatly extended, allowing for increased cell death.
“However, in the absence of NF-κB, this JNK activation is greatly extended, allowing for increased cell death 57, 58.”
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Administration of antioxidants to FOXO-deficient mice rescued the defect in the hematopoietic stem cell compartment.
“Remarkably, administration of antioxidants to FOXO-deficient mice rescued this defect in the HSC compartment, suggesting the necessity of ROS regulation in stem cell maintenance.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [41] Tothova, 2007, FoxOs are critical mediators of hematopoietic stem cell resistance to physiologic oxidative stress, Cell source
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Treatment of mice with antioxidants or p38 inhibitors rescued stem cell hyperproliferation caused by Atm deficiency.
“treatment of mice with antioxidants or p38 inhibitors rescued this stem cell hyperproliferation 42.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [42] Ito, 2006, Reactive oxygen species act through p38 MAPK to limit the lifespan of hematopoietic stem cells, Nat. Med. source
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- Premisecitation
Treatment of cells with antioxidants inhibits TNFα-induced killing of NF-κB-deficient cells.
“Furthermore, treatment of cells with antioxidants inhibits TNFα-induced killing of NF-κB-deficient cells 60, 64.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [60] Sakon, 2003, NF-kappaB inhibits TNF-induced accumulation of ROS that mediate prolonged MAPK activation and necrotic cell death, EMBO J. source
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- cites [64] Pham, 2004, Ferritin heavy chain upregulation by NF-kappaB inhibits TNFalpha-induced apoptosis by suppressing reactive oxygen species, Cell source
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- Interpretationcitation
ROS levels increase as a population of stem cells differentiates.
“Thus, a paradigm appears to be set in which ROS levels increase as a population of stem cells differentiates.”
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Cellular ROS levels increase upon the differentiation of both neural and epithelial stem cells.
“Cellular ROS levels also increase upon the differentiation of both neural and epithelial stem cells 44–46.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [44] Smith, 2000, Redox state is a central modulator of the balance between self-renewal and differentiation in a dividing glial precursor cell, Proc. Natl. Acad. Sci. U. S. A. source
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- cites [46] Diehn, 2009, Association of reactive oxygen species levels and radioresistance in cancer stem cells, Nature source
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- Premisecitation
Oxidation of two intra- or intermolecular cysteines forms disulfide bridges allowing for conformational changes or oligomerization of proteins.
“Additionally, oxidation of two intra- or intermolecular cysteines forms disulfide bridges allowing for conformational changes or oligomerization of proteins 6, 7.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [6] Janssen-Heininger, 2008, Redox-based regulation of signal transduction: principles, pitfalls, and promises, Free Radic. Biol. Med. source
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- cites [7] Brandes, 2009, Thiol-based redox switches in eukaryotic proteins, Antioxid. Redox Signal. source
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- Premisereasoning
Protein tyrosine phosphatases possess a reactive cysteine in their catalytic domain that is required for enzymatic activity.
“These enzymes oppose the activity of protein kinases and possess a reactive cysteine in their catalytic domain that is required for enzymatic activity.”
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Enforced expression of SOD2 in the absence of NF-κB can counteract TNFα-induced cell death.
“and enforced expression of SOD2 in the absence of NF-κB can counteract TNFα-induced cell death 53.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
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- Premisecitation
Protein tyrosine phosphatase 1B was the first phosphatase demonstrated to be inhibited by ROS under physiological conditions.
“Protein tyrosine phosphatase 1B was the first phosphatase demonstrated to be inhibited by ROS under physiological conditions 49, 50.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [49] Lee, 1998, Reversible inactivation of protein-tyrosine phosphatase 1B in A431 cells stimulated with epidermal growth factor, J. Biol. Chem. source
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- cites [50] Meng, 2002, Reversible oxidation and inactivation of protein tyrosine phosphatases in vivo, Mol. Cell source
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- Premisecitation
The key regulator of NF-κB-mediated inhibition of the JNK pathway is the mitochondrial antioxidant protein SOD2.
“Although NF-κB regulates the expression of several anti-apoptotic genes, the key regulator of NF-κB-mediated inhibition of the JNK pathway is the mitochondrial antioxidant protein SOD2 53.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
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- Interpretationcitation
The mechanism by which SOD2 confers survival to cells treated with TNFα lies in the ability of ROS to inactivate JNK phosphatases.
“The mechanism by which SOD2 confers survival to cells treated with TNFα lies in the ability of ROS to inactivate JNK phosphatases 53.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
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- Premisecitation
JNK is an important mediator of pro-apoptotic signaling downstream of TNFα.
“The c-Jun N-terminal kinase (JNK) is an important mediator of pro-apoptotic signaling downstream of TNFα.”
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Upon treatment with TNFα, mitochondrial production of ROS is increased.
“Upon treatment with TNFα, mitochondrial production of ROS is increased 59.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [59] Chandel, 2001, Reactive oxygen species are downstream products of TRAF-mediated signal transduction, J. Biol. Chem. source
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- Premisecitation
ROS have been shown to inhibit other classes of phosphatases, including PTEN and MAPK phosphatases.
“Since then, ROS have been shown to inhibit other classes of phosphatases, including phosphatase and tensin homolog (PTEN, lipid phosphatase) and MAPK phosphatases 51–53.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [51] Kwon, 2004, Reversible oxidation and inactivation of the tumor suppressor PTEN in cells stimulated with peptide growth factors, Proc. Natl. Acad. Sci. U. S. A. source
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- cites [52] Levinthal, 2005, Reversible oxidation of ERK-directed protein phosphatases drives oxidative toxicity in neurons, J. Biol. Chem. source
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- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
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- Premisecitation
The thymocyte maturation defect characteristic of Bmi1−/− mice is largely rescued by treatment with antioxidants.
“The thymocyte maturation defect characteristic of Bmi1−/− mice is largely rescued by treatment with antioxidants.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [43] Liu, 2009, Bmi1 regulates mitochondrial function and the DNA damage response pathway, Nature source
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- Interpretationreasoning
NF-κB promotes survival through regulation of mitochondrial antioxidant protein expression during the response to TNFα.
“Thus, NF-κB promotes survival through regulation of mitochondrial antioxidant protein expression during the response to TNFα.”
Quote in the paperSubstantial claim - Premisecitation
Upon binding of TNFα to its receptors, JNK activity is rapidly but transiently stimulated.
“Upon binding of TNFα to its receptors, JNK activity is rapidly, but transiently, stimulated 56.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [56] Liu, 1996, Dissection of TNF receptor 1 effector functions: JNK activation is not linked to apoptosis while NF-kappaB activation prevents cell death, Cell source
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- Premisecitation
Deletion of Foxo1, 3, and 4 in hematopoietic stem cells results in cell cycle entry and terminal differentiation.
“Deletion of Foxo1, 3, and 4 in hematopoietic stem cells (HSCs) results in cell cycle entry and terminal differentiation 41.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [41] Tothova, 2007, FoxOs are critical mediators of hematopoietic stem cell resistance to physiologic oxidative stress, Cell source
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- Interpretationcitation
Mitochondrial ROS play a large role in maintaining the oxidative homeostasis of the proteome.
“Mitochondrial ROS play a large role in maintaining the oxidative homeostasis of the proteome as inhibition of mitochondrial ROS production drastically decreases the total number of cellular protein disulfide bonds 48.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [48] Yang, 2007, Regulation of the protein disulfide proteome by mitochondria in mammalian cells, Proc. Natl. Acad. Sci. U. S. A. source
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- Premisecitation
Inhibition of mitochondrial ROS production drastically decreases the total number of cellular protein disulfide bonds.
“inhibition of mitochondrial ROS production drastically decreases the total number of cellular protein disulfide bonds 48.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [48] Yang, 2007, Regulation of the protein disulfide proteome by mitochondria in mammalian cells, Proc. Natl. Acad. Sci. U. S. A. source
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- Premisecitation
In Drosophila melanogaster, ROS levels increase as multipotent hematopoietic progenitors differentiate.
“ROS levels increase as Drosophila multipotent hematopoietic progenitors differentiate 47”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Owusu-Ansah, 2009, Reactive oxygen species prime Drosophila haematopoietic progenitors for differentiation, Nature source
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- Premisecitation
SOD2 is essential for cellular survival following TNFα treatment.
“SOD2 is thus essential for cellular survival following TNFα treatment 61–63”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [61] Wong, 1988, Induction of manganous superoxide dismutase by tumor necrosis factor: possible protective mechanism, Science source
Not checked in the free run.
- cites [62] Wong, 1989, Manganous superoxide dismutase is essential for cellular resistance to cytotoxicity of tumor necrosis factor, Cell source
Not checked in the free run.
- cites [63] Jones, 1997, Tumor necrosis factor alpha and interleukin-1beta regulate the murine manganese superoxide dismutase gene through a complex intronic enhancer involving C/EBP-beta and NF-kappaB, Mol. Cell. Biol. source
Not checked in the free run.
- Interpretationreasoning
ROS regulation is necessary for stem cell maintenance.
“suggesting the necessity of ROS regulation in stem cell maintenance”
Quote in the paperSubstantial claim - Premisecitation
Deletion of the polycomb gene Bmi1 leads to mitochondrial dysfunction and increased ROS production in thymocytes.
“Deletion of the polycomb gene Bmi1 leads to mitochondrial dysfunction and increased ROS production in thymocytes 43.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [43] Liu, 2009, Bmi1 regulates mitochondrial function and the DNA damage response pathway, Nature source
Not checked in the free run.
- Premisecitation
TNFα acts on its receptors to promote either cell survival or cell death.
“Tumor necrosis factor alpha (TNFα) is a pleiotropic cytokine that acts on its receptors (TNFRs) to promote either cell survival or cell death 54.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [54] Aggarwal, 2003, Signalling pathways of the TNF superfamily: a double-edged sword, Nat. Rev. Immunol. source
Not checked in the free run.
- Premisecitation
Antioxidants inhibited tumor growth in a mouse model of Kaposi's sarcoma.
“Similarly, antioxidants inhibited tumor growth in a mouse model of Kaposi’s sarcoma.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [71] Ma, 2009, Antitumorigenesis of antioxidants in a transgenic Rac1 model of Kaposi's sarcoma, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
- Premisecitation
The discovery of the first antioxidant enzymes (superoxide dismutase) came decades before the discovery that non-phagocytic cells also possess enzymes (NADPH oxidases) whose sole biological function is to produce ROS.
“First, the discovery of the first antioxidant enzymes (superoxide dismutase) came decades before the discovery that non-phagocytic cells also possess enzymes (NADPH oxidases) whose sole biological function is to produce ROS 78, 79.”
Quote in the paperNot a substantial claim0 of 2 sources checked - Interpretationreasoning
Mitochondrial ROS play an important role in the Sirt3−/− phenotype.
“suggesting that mitochondrial ROS play an important role in the Sirt3−/− phenotype”
Quote in the paperSubstantial claim - Premisecitation
SIRT3 deacetylates FOXO3a, promoting its nuclear localization and transcriptional activation.
“SIRT3 deacetylates FOXO3a, promoting its nuclear localization and transcriptional activation 40, 72.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [40] Sundaresan, 2009, Sirt3 blocks the cardiac hypertrophic response by augmenting Foxo3a-dependent antioxidant defense mechanisms in mice, J. Clin. Invest.
Not checked in the free run.
- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Interpretationcitation
The effect of antioxidant treatment in myc-driven tumorigenesis was a result of the inhibition of HIF accumulation.
“However, the effect of antioxidant treatment was a result of the inhibition of HIF accumulation: expression of a stable HIF mutant alone could provide resistance to antioxidant treatment.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [70] Gao, 2007, HIF-dependent antitumorigenic effect of antioxidants in vivo, Cancer Cell source
Not checked in the free run.
- Premisecitation
Sod2−/− fibroblasts are capable of transformation with single oncogenes.
“These finding are consistent with observations in Sod2−/− fibroblasts, which like their Sirt3−/− counterparts, are capable of transformation with single oncogenes 72.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Premisecitation
Sod2 heterozygous mice have a normal lifespan.
“However, these heterozygous mice have a normal lifespan 88, 89.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [88] Li, 1995, Dilated cardiomyopathy and neonatal lethality in mutant mice lacking manganese superoxide dismutase, Nat. Genet. source
Not checked in the free run.
- cites [89] Lebovitz, 1996, Neurodegeneration, myocardial injury, and perinatal death in mitochondrial superoxide dismutase-deficient mice, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
- Premisecitation
Sod2 heterozygous littermates exhibit mitochondrial damage and oxidative modifications to both nuclear and mitochondrial DNA.
“their heterozygous littermates exhibit mitochondrial damage and oxidative modifications to both nuclear and mitochondrial DNA”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [88] Li, 1995, Dilated cardiomyopathy and neonatal lethality in mutant mice lacking manganese superoxide dismutase, Nat. Genet. source
Not checked in the free run.
- cites [89] Lebovitz, 1996, Neurodegeneration, myocardial injury, and perinatal death in mitochondrial superoxide dismutase-deficient mice, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
- Premisecitation
Another common trait of transformed cells is oxidative stress.
“Another common trait of transformed cells is oxidative stress 67, 68.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [67] Szatrowski, 1991, Production of large amounts of hydrogen peroxide by human tumor cells, Cancer Res.
Not checked in the free run.
- cites [68] Toyokuni, 1995, Persistent oxidative stress in cancer, FEBS Lett. source
Not checked in the free run.
- Premisecitation
The increased metastatic potential resulting from transfer of mutant mitochondria was inhibited by treatment with antioxidants.
“Notably, this metastasis was inhibited by treatment with antioxidants 76.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [76] Ishikawa, 2008, ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis, Science source
Not checked in the free run.
- Premisecitation
Sirt3−/− murine fibroblasts display increased levels of mitochondrial ROS accumulation compared to wild-type cells when either Myc or Ras oncogenes are expressed.
“Moreover, Sirt3−/− murine fibroblasts display increased levels of mitochondrial ROS accumulation (compared to wild-type cells) when either Myc or Ras oncogenes are expressed.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Interpretationreasoning
The common notion of ROS solely as damaging agents likely stems from two factors.
“The common notion of ROS solely as damaging agents likely stems from two factors.”
Quote in the paperNot a substantial claim- Rests on an assumption: The failure of clinical trials using antioxidants to scavenge ROS is due to the inadequacy of the damaging-only view of ROS rather than other factors.
- Premisecitation
ROS-mediated signaling promotes metastasis in addition to its involvement in tumor initiation and maintenance.
“ROS-mediated signaling is not only involved in tumor initiation and maintenance; it also promotes metastasis.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [76] Ishikawa, 2008, ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis, Science source
Not checked in the free run.
- cites [77] Koshikawa, 2009, Reactive oxygen species-generating mitochondrial DNA mutation up-regulates hypoxia-inducible factor-1alpha gene transcription via phosphatidylinositol 3-kinase-Akt/protein kinase C/histone deacetylase pathway, J. Biol. Chem. source
Not checked in the free run.
- Premisecitation
Sod2 transgenic mice do not have an increased lifespan compared to wild-type.
“Furthermore, Sod2 transgenic mice do not have an increased lifespan compared to wild-type”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [90] Van Remmen, 2003, Life-long reduction in MnSOD activity results in increased DNA damage and higher incidence of cancer but does not accelerate aging, Physiol. Genomics source
Not checked in the free run.
- cites [91] Raineri, 2001, Strain-dependent high-level expression of a transgene for manganese superoxide dismutase is associated with growth retardation and decreased fertility, Free Radic. Biol. Med. source
Not checked in the free run.
- Premisecitation
Transfer of mutant mitochondria to a poorly metastatic tumor cell line was sufficient to increase the metastatic potential of the recipient cell line.
“Transfer of mutant mitochondria to a poorly metastatic tumor cell line was sufficient to increase the metastatic potential of the recipient cell line.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [76] Ishikawa, 2008, ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis, Science source
Not checked in the free run.
- Premisecitation
In the Kaposi's sarcoma model, antioxidant treatment was associated with reduced Akt and HIF activities in tumors.
“In this case, treatment was associated with reduced Akt and HIF activities in tumors71.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [71] Ma, 2009, Antitumorigenesis of antioxidants in a transgenic Rac1 model of Kaposi's sarcoma, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
- Interpretationcitation
Mitochondrial ROS directly contribute to cellular transformation induced by either Ras or Myc overexpression.
“Recent work demonstrates that mitochondrial ROS directly contribute to cellular transformation induced by either Ras or Myc overexpression.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Premisecitation
Sod2−/− mice die before birth.
“Sod2−/− mice die before birth”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [88] Li, 1995, Dilated cardiomyopathy and neonatal lethality in mutant mice lacking manganese superoxide dismutase, Nat. Genet. source
Not checked in the free run.
- cites [89] Lebovitz, 1996, Neurodegeneration, myocardial injury, and perinatal death in mitochondrial superoxide dismutase-deficient mice, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
- Interpretationreasoning
Genetic experiments in mouse models have cast doubt on the idea that less is better when it comes to ROS.
“In addition to these clinical trials, genetic experiments in mouse models have cast doubt on the idea that less is better when it comes to ROS.”
Quote in the paperSubstantial claim - Premisecitation
In a mouse model of myc-driven tumorigenesis, tumor growth is inhibited by treatment with antioxidants.
“In a mouse model of myc-driven tumorigenesis, tumor growth is inhibited by treatment with antioxidants 70.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [70] Gao, 2007, HIF-dependent antitumorigenic effect of antioxidants in vivo, Cancer Cell source
Not checked in the free run.
- Premisecitation
SIRT3 acts as a tumor suppressor through its regulation of FOXO activity and ROS maintenance.
“The NAD-dependent deacetylase sirtuin 3 (SIRT3) acts as a tumor suppressor through its regulation of FOXO activity and ROS maintenance 72.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Premisecitation
Compounds that raise ROS levels can effectively and selectively kill a variety of tumor cell lines.
“Indeed, this seems to be the case as compounds that raise ROS levels can effectively and selectively kill a variety of tumor cell lines 31, 74, 75.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [31] Nogueira, 2008, Akt determines replicative senescence and oxidative or oncogenic premature senescence and sensitizes cells to oxidative apoptosis, Cancer Cell source
Not checked in the free run.
- cites [74] Yu, 1998, Chemopreventive isothiocyanates induce apoptosis and caspase-3-like protease activity, Cancer Res.
Not checked in the free run.
- cites [75] Trachootham, 2006, Selective killing of oncogenically transformed cells through a ROS-mediated mechanism by beta-phenylethyl isothiocyanate, Cancer Cell source
Not checked in the free run.
- Premisecitation
Expression of SOD2 inhibited oncogene-mediated transformation of Sirt3−/− cells.
“Expression of SOD2 inhibited this oncogene-mediated transformation of Sirt3−/− cells, suggesting that mitochondrial ROS play an important role in the Sirt3−/− phenotype.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
- Premisecitation
Part of the fitness of Clk1+/− mice is attributed to the ability of mitochondrial ROS to modulate HIF function and inflammation.
“and indeed, part of the fitness of Clk1+/− mice is attributed to the ability of mitochondrial ROS to modulate HIF function and inflammation 98.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [98] Wang, D. et al. Elevated mitochondrial reactive oxygen species generation affects the immune response via hypoxia-inducible factor-1alpha in long-lived Mclk1± mouse mutants. J. Immunol. 184, 582–590 source
Not checked in the free run.
- Interpretationreasoning
There is no unified model of mitochondrial ROS as a detrimental or beneficial agent in biology.
“Thus, there is no unified model of mitochondrial ROS as a detrimental or beneficial agent in biology.”
Quote in the paperSubstantial claim- Rests on an assumption: The failure of clinical trials using antioxidants to scavenge ROS is due to the inadequacy of the damaging-only view of ROS rather than other factors.
- Premisecitation
Various combinations of Sod2, cytosolic Sod1, or catalase transgenes also fail to extend the lifespan of mice.
“Various combinations of Sod2, cytosolic Sod1, or catalase transgenes also fail to extend the lifespan of mice 92.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [92] Perez, 2009, The overexpression of major antioxidant enzymes does not extend the lifespan of mice, Aging Cell source
Not checked in the free run.
- Interpretationreasoning
Mitochondrial complex III produces superoxide through the Q-cycle.
“Figure I Mitochondrial complex III produces superoxide through the Q-cycle.”
Quote in the paperSubstantial claim - Premisecitation
In C. elegans, lifespan extension mediated by glucose restriction is associated with increased mitochondrial metabolism and ROS production.
“Furthermore, in C. elegans, lifespan extension mediated by glucose restriction is associated with increased mitochondrial metabolism and ROS production.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [97] Schulz, 2007, Glucose restriction extends Caenorhabditis elegans life span by inducing mitochondrial respiration and increasing oxidative stress, Cell Metab. source
Not checked in the free run.
- Interpretationreasoning
Even higher levels of ROS will trigger senescence or cell death.
“Even higher levels of ROS will trigger senescence or cell death.”
Quote in the paperSubstantial claim - Interpretationreasoning
The authors propose a new view of mitochondrial ROS in which low levels of ROS are required for cellular processes such as proliferation and differentiation.
“Based on the entirety of published observations, we propose a new view of mitochondrial ROS in which low levels of ROS are required for cellular processes such as proliferation and differentiation.”
Quote in the paperSubstantial claim- Rests on an assumption: The failure of clinical trials using antioxidants to scavenge ROS is due to the inadequacy of the damaging-only view of ROS rather than other factors.
- Premisecitation
Mice heterozygous for mitochondrial glutathione peroxidase 4 or the ubiquinone biosynthesis protein CLK1 display high levels of mitochondrial oxidative stress, yet live longer than their wild-type counterparts.
“Mice heterozygous for the mitochondrial glutathione peroxidase 4 or the ubiquinone biosynthesis protein CLK1 display high levels of mitochondrial oxidative stress, yet live longer than their wild-type counterparts 93, 94.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [93] Ran, 2007, Reduction in glutathione peroxidase 4 increases life span through increased sensitivity to apoptosis, J. Gerontol. A Biol. Sci. Med. Sci. source
Not checked in the free run.
- cites [94] Liu, 2005, Evolutionary conservation of the clk-1-dependent mechanism of longevity: loss of mclk1 increases cellular fitness and lifespan in mice, Genes Dev. source
Not checked in the free run.
- Premisecitation
In Caenorhabditis elegans, inactivation of clk-1 or sod-2 is associated with increased lifespan.
“These results correlate with those from Caenorhabditis elegans, in which inactivation of clk-1 or sod-2 is associated with increased lifespan 95, 96.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [95] Wong, 1995, Mutations in the clk-1 gene of Caenorhabditis elegans affect developmental and behavioral timing, Genetics source
Not checked in the free run.
- cites [96] Van Raamsdonk, 2009, Deletion of the mitochondrial superoxide dismutase sod-2 extends lifespan in Caenorhabditis elegans, PLoS Genet. source
Not checked in the free run.
- Interpretationnone given
Levels of ROS that cause irreversible damage to cellular proteins, DNA, or lipids might only be seen under super-physiological conditions such as UV irradiation or direct treatment of cells in culture with oxidants.
“Levels of ROS that cause irreversible damage to cellular proteins, DNA, or lipids might only be seen under super-physiological conditions such as UV irradiation or direct treatment of cells in culture with oxidants.”
Quote in the paperNot a substantial claim - Premisecitation
The theory of hormesis can be applied to mitochondrial ROS.
“This theory can be applied to mitochondrial ROS 97”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [97] Schulz, 2007, Glucose restriction extends Caenorhabditis elegans life span by inducing mitochondrial respiration and increasing oxidative stress, Cell Metab. source
Not checked in the free run.
- Premisecitation
Recent publications draw a correlation between high oxidative stress and lifespan extension.
“To make matters more complicated, recent publications draw a correlation between high oxidative stress and lifespan extension.”
Quote in the paperSubstantial claim - Premisecitation
Treatment of worms with antioxidants abolished the life extension mediated by glucose restriction.
“Treatment of worms with antioxidants abolished this life extension 97.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [97] Schulz, 2007, Glucose restriction extends Caenorhabditis elegans life span by inducing mitochondrial respiration and increasing oxidative stress, Cell Metab. source
Not checked in the free run.
- May combine two claims. 36
- Classified as probably not a substantial claim. 7
May combine two claims.
Interpretationreasoning§ Mitochondrial reactive oxygen species regulate cellular signaling and dictate biological outcomesMitochondrial ROS production plays a role in the maintenance of cellular oxidative homeostasis and in the propagation of cellular signaling pathways.
“and plays a role in the maintenance of cellular oxidative homeostasis and propagation of cellular signaling pathways”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S4 (based).
Premisenone givenMitochondria are a principal source of cellular reactive oxygen species.
“Mitochondria are a principal source of cellular reactive oxygen species (ROS).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenSuperoxide is converted to hydrogen peroxide by superoxide dismutases both within mitochondria and in the cytosol.
“Superoxide is the proximal ROS produced by mitochondria and is converted to hydrogen peroxide (H2O2) through the action of superoxide dismutases (SODs) both within the mitochondria and in the cytosol.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationAMPK phosphorylation of the tuberous sclerosis complex during hypoxia leads to inhibition of mTOR activity and conservation of cellular energy by inhibiting protein translation.
“This leads to inhibition of mTOR activity and further conservation of cellular energy by inhibiting the energetically-costly process of protein translation 24.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [24] Liu, 2006, Hypoxia-induced energy stress regulates mRNA translation and cell growth, Mol. Cell source
Not checked in the free run.
May combine two claims.
PremisecitationAkt positively regulates mTOR, which is a key regulator of mitochondrial oxygen consumption and oxidative capacity.
“Akt positively regulates the mammalian target of rapamycin (mTOR), which is a key regulator of mitochondrial oxygen consumption and oxidative capacity 29.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [29] Schieke, 2006, The mammalian target of rapamycin (mTOR) pathway regulates mitochondrial oxygen consumption and oxidative capacity, J. Biol. Chem. source
Not checked in the free run.
May combine two claims.
PremisecitationActivation of phosphoinositide-3-kinase by ligation of growth factors to their cellular receptors promotes recruitment of Akt to the plasma membrane and its subsequent activation.
“Activation of phosphoinositide-3-kinase (PI3K) by ligation of growth factors to their cellular receptors promotes recruitment of Akt to the plasma membrane and its subsequent activation 28.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [28] Cantley, 2002, The phosphoinositide 3-kinase pathway, Science source
Not checked in the free run.
May combine two claims.
Premisecitationρ0 Hep3B cells do not contain mitochondrial DNA and demonstrate no electron transport or ROS production.
“These cells do not contain mitochondrial DNA and thus demonstrate no electron transport or ROS production”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [8] Chandel, 1998, Mitochondrial reactive oxygen species trigger hypoxia-induced transcription, Proc. Natl. Acad. Sci. U. S. A. source
Not checked in the free run.
Classified as probably not a substantial claim.
Premisenone givenComplex III accepts electrons donated to coenzyme Q by mitochondrial complexes I and II and transfers them to cytochrome c.
“Complex III accepts electrons donated to coenzyme Q by mitochondrial complexes I and II and transfers them to cytochrome c.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationGenetic targeting of the complex III subunit Rieske iron-sulfur protein abolishes ROS formation during hypoxia, preventing activation of downstream signaling effectors.
“Thus, genetic targeting of the complex III subunit Rieske iron-sulfur protein, the protein required for electron transfer from ubiquiol, abolishes ROS formation during hypoxia, preventing the activation of downstream signaling effectors 17, 19, 20.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [17] Brunelle, 2005, Oxygen sensing requires mitochondrial ROS but not oxidative phosphorylation, Cell Metab. source
Not checked in the free run.
- cites [19] Guzy, 2005, Mitochondrial complex III is required for hypoxia-induced ROS production and cellular oxygen sensing, Cell Metab. source
Not checked in the free run.
- cites [20] Bell, 2007, The Qo site of the mitochondrial complex III is required for the transduction of hypoxic signaling via reactive oxygen species production, J. Cell Biol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisereasoningThe hydroxylation reaction that targets HIF-α subunits is carried out by prolyl hydroxylases 1, 2, and 3.
“This hydroxylation reaction is carried out by a family of 2-oxoglutarate-dependent dioxygenases termed prolyl hydroxylases 1, 2, and 3 (PHD1-3).”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationInduction of FOXO3a activity during the hypertrophic response increases mitochondrial ROS scavenging, attenuating pro-growth signaling and protecting cardiomyocytes from prolonged hypertrophic growth.
“Induction of FOXO3a activity during the hypertrophic response thus increases mitochondrial ROS scavenging, attenuating pro-growth signaling and protecting cardiomyocytes from prolonged hypertrophic growth 40.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [40] Sundaresan, 2009, Sirt3 blocks the cardiac hypertrophic response by augmenting Foxo3a-dependent antioxidant defense mechanisms in mice, J. Clin. Invest.
Not checked in the free run.
May combine two claims.
PremisecitationCells expressing a mutant cytochrome b subunit are unable to consume oxygen for oxidative phosphorylation but are able to produce complex III-derived ROS and stabilize HIF during hypoxia.
“Thus, cells that express a mutant cytochrome b subunit are unable to consume oxygen for oxidative phosphorylation, but are able to produce complex III-derived ROS and stabilize HIF during hypoxia 20.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [20] Bell, 2007, The Qo site of the mitochondrial complex III is required for the transduction of hypoxic signaling via reactive oxygen species production, J. Cell Biol. source
Not checked in the free run.
May combine two claims.
InterpretationcitationHypoxia induces ROS production from mitochondrial complex III, creating a cytosolic signal that stabilizes HIF.
“Further experiments using mitochondrial inhibitors, antioxidants, and genetic targeting of mitochondrial proteins suggested that hypoxia induces ROS production from mitochondrial complex III, creating a cytosolic signal that stabilizes HIF 11, 17–19.”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [11] Chandel, 2000, Reactive oxygen species generated at mitochondrial complex III stabilize hypoxia-inducible factor-1alpha during hypoxia: a mechanism of O2 sensing, J. Biol. Chem. source
Not checked in the free run.
- cites [17] Brunelle, 2005, Oxygen sensing requires mitochondrial ROS but not oxidative phosphorylation, Cell Metab. source
Not checked in the free run.
- cites [18] Mansfield, 2005, Mitochondrial dysfunction resulting from loss of cytochrome c impairs cellular oxygen sensing and hypoxic HIF-alpha activation, Cell Metab. source
Not checked in the free run.
- cites [19] Guzy, 2005, Mitochondrial complex III is required for hypoxia-induced ROS production and cellular oxygen sensing, Cell Metab. source
Not checked in the free run.
May combine two claims.
InterpretationreasoningAt the organismal level, mitochondrial ROS regulate airway fluid absorption and oxygen exchange in the pulmonary vasculature.
“At the organismal level, mitochondrial ROS regulate airway fluid absorption and oxygen exchange in the pulmonary vasculature.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationThe increase in calcium and subsequent pulmonary artery vasoconstriction are both dependent on hypoxic mitochondrial ROS production.
“This increase in calcium and subsequent pulmonary artery vasoconstriction are both dependent on hypoxic mitochondrial ROS production 9, 14.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [9] Waypa, 2001, Model for hypoxic pulmonary vasoconstriction involving mitochondrial oxygen sensing, Circ. Res. source
Not checked in the free run.
- cites [14] Waypa, 2006, Increases in mitochondrial reactive oxygen species trigger hypoxia-induced calcium responses in pulmonary artery smooth muscle cells, Circ. Res. source
Not checked in the free run.
May combine two claims.
PremisecitationAkt activation is associated with increased oxygen consumption and an increase in total cellular ATP derived from both glycolytic and oxidative sources.
“Akt activation is associated with increased oxygen consumption as well as an increase in total cellular ATP derived from both glycolytic and oxidative sources 30, 31.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [30] Gottlob, 2001, Inhibition of early apoptotic events by Akt/PKB is dependent on the first committed step of glycolysis and mitochondrial hexokinase, Genes Dev. source
Not checked in the free run.
- cites [31] Nogueira, 2008, Akt determines replicative senescence and oxidative or oncogenic premature senescence and sensitizes cells to oxidative apoptosis, Cancer Cell source
Not checked in the free run.
May combine two claims.
PremisecitationThe unpaired electron of ubisemiquinone is normally transferred to the cytochrome b center of complex III, but can also react with molecular oxygen to form superoxide.
“Normally, the unpaired electron of ubisemiquinone is transferred to the cytochrome b center of complex III; however, this electron can also react with molecular oxygen to form superoxide 2, 26.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [2] Murphy, 2009, How mitochondria produce reactive oxygen species, Biochem. J. source
Not checked in the free run.
- cites [26] Turrens, 1985, Ubisemiquinone is the electron donor for superoxide formation by complex III of heart mitochondria, Arch. Biochem. Biophys. source
Not checked in the free run.
May combine two claims.
InterpretationreasoningActivation of the PI3K-Akt pathway results in increased production of ROS from mitochondria through metabolic pathways and in the inability to scavenge mitochondrial ROS through inhibition of FOXOs.
“Thus, activation of the PI3K-Akt pathway not only results in increased production of ROS from mitochondria through metabolic pathways, but also the inability to scavenge mitochondrial ROS through inhibition of FOXOs.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationAtm deficiency leads to increased cellular ROS levels in hematopoietic stem cells, resulting in activation of p38 MAPK and mitotic entry.
“Atm deficiency leads to increased cellular ROS levels in HSCs, resulting in activation of p38 mitogen-activated protein kinase (MAPK) and mitotic entry”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [42] Ito, 2006, Reactive oxygen species act through p38 MAPK to limit the lifespan of hematopoietic stem cells, Nat. Med. source
Not checked in the free run.
May combine two claims.
InterpretationcitationSOD2 provides a protective effect by lowering cellular ROS levels and decreasing JNK activation after TNFα treatment.
“SOD2 provides a protective effect by lowering cellular ROS levels and decreasing JNK activation after TNFα treatment 53.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
Not checked in the free run.
May combine two claims.
InterpretationreasoningTreatment of cells with TNFα leads to mitochondrial ROS production, oxidation of JNK phosphatase catalytic cysteines, and activation of JNK signaling and cell death.
“Treatment of cells with TNFα thus leads to mitochondrial ROS production, oxidation of JNK phosphatase catalytic cysteines, and activation of JNK signaling and cell death.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationOxidation of the cysteine sulfhydryl group can alter protein-protein interactions, the DNA binding activity of transcription factors, and the catalytic activity of enzymes.
“Oxidation of the cysteine sulfhydryl group can alter protein–protein interactions, the DNA binding activity of transcription factors, and the catalytic activity of enzymes.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationCellular transformation is a multistep process requiring acquisition of activated oncogenes and loss of tumor-suppressor genes, leading to usurpation of cellular signaling pathways controlling proliferation, survival, and metabolism.
“Cellular transformation is a multistep process requiring acquisition of activated oncogenes and loss of tumor-suppressor genes, leading to usurpation of cellular signaling pathways controlling proliferation, survival, and metabolism 65, 66.”
Quote in the paperNot a substantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationOverproduction of mitochondrial ROS leads to precocious differentiation into mature blood cells, whereas increased scavenging ability inhibits differentiation.
“overproduction of mitochondrial ROS leads to precocious differentiation into mature blood cells whereas increased scavenging ability inhibits differentiation.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Owusu-Ansah, 2009, Reactive oxygen species prime Drosophila haematopoietic progenitors for differentiation, Nature source
Not checked in the free run.
May combine two claims.
PremisecitationThe low pKa of the catalytic cysteine allows it to act as a nucleophile for catalysis of dephosphorylation but also makes it a target for oxidation by ROS.
“The low pKa of this cysteine allows it to act as a nucleophile for catalysis of the dephosphorylation reaction, but also makes it a target for oxidation by ROS 6, 7.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [6] Janssen-Heininger, 2008, Redox-based regulation of signal transduction: principles, pitfalls, and promises, Free Radic. Biol. Med. source
Not checked in the free run.
- cites [7] Brandes, 2009, Thiol-based redox switches in eukaryotic proteins, Antioxid. Redox Signal. source
Not checked in the free run.
May combine two claims.
PremisecitationThe outcome of TNFα exposure on cell fate depends on the activities of two separate TNFR complexes, one of which mediates survival through activation of NF-κB.
“The outcome of TNFα exposure on cell fate depends on the activities of two separate TNFR complexes, one of which mediates survival through activation of nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) 55.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [55] Micheau, 2003, Induction of TNF receptor I-mediated apoptosis via two sequential signaling complexes, Cell source
Not checked in the free run.
May combine two claims.
InterpretationreasoningLow levels of ROS are required for quiescence and stem cell maintenance, whereas ROS induction leads to proliferation and differentiation programs.
“Low levels of ROS are required for quiescence and stem cell maintenance, whereas ROS induction leads to proliferation and differentiation programs.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationCells without intact NF-κB lack SOD2 induction and accumulate ROS at much higher levels than wild-type cells when treated with TNFα, corresponding with increased JNK activation.
“Cells without intact NF-κB lack SOD2 induction and accumulate ROS at much higher levels than their wild-type counterparts when treated with TNFα, corresponding with increased JNK activation 53, 60.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [53] Kamata, 2005, Reactive oxygen species promote TNFalpha-induced death and sustained JNK activation by inhibiting MAP kinase phosphatases, Cell source
Not checked in the free run.
- cites [60] Sakon, 2003, NF-kappaB inhibits TNF-induced accumulation of ROS that mediate prolonged MAPK activation and necrotic cell death, EMBO J. source
Not checked in the free run.
May combine two claims.
PremisecitationActivation of oncogenes, aberrant metabolism, mitochondrial dysfunction, and loss of the tumor suppressor p53 can all promote increased ROS accumulation in cancer cells.
“Activation of oncogenes, aberrant metabolism, mitochondrial dysfunction, and loss of the tumor suppressor p53 can all promote increased ROS accumulation in cancer cells 69.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [69] Trachootham, 2009, Targeting cancer cells by ROS-mediated mechanisms: a radical therapeutic approach?, Nat. Rev. Drug Discov. source
Not checked in the free run.
May combine two claims.
InterpretationreasoningElevated ROS levels are required for tumor growth and can promote transformation, even acting as the "second hit" in the Knudson two-hit model of carcinogenesis.
“The available data suggests that elevated ROS levels are required for tumor growth and can promote transformation, even acting as the “second hit” in the Knudson two-hit model of carcinogenesis.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationThe G13997A mutation in the gene encoding the ND6 subunit of mitochondrial complex I is associated with high HIF activity and increased metastatic potential.
“This mutation is also associated with high HIF activity and increased metastatic potential 76, 77.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [76] Ishikawa, 2008, ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis, Science source
Not checked in the free run.
- cites [77] Koshikawa, 2009, Reactive oxygen species-generating mitochondrial DNA mutation up-regulates hypoxia-inducible factor-1alpha gene transcription via phosphatidylinositol 3-kinase-Akt/protein kinase C/histone deacetylase pathway, J. Biol. Chem. source
Not checked in the free run.
May combine two claims.
PremisecitationSirt3−/− cells become transformed after expression of either Myc or Ras, whereas wild-type cells require expression of both oncogenes.
“Sirt3−/− cells become transformed after expression of either Myc or Ras, whereas wild-type cells require expression of both oncogenes.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
May combine two claims.
PremisecitationThe ROS accumulation in Sirt3−/− fibroblasts is associated with decreased flux through mitochondrial complexes I and III and reduced cellular levels of SOD2.
“This ROS accumulation is associated with decreased flux through mitochondrial complexes I and III (possibly allowing for increased escape of electrons to O2), and reduced cellular levels of SOD2 72.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Kim, H.S. et al. SIRT3 Is a mitochondria-localized tumor suppressor required for maintenance of mitochondrial integrity and metabolism during stress. Cancer Cell 17, 41–52 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationHigh cellular ROS levels are associated with cancer, diabetes, inflammatory diseases, ischemia-related diseases, and neurodegeneration.
“Second, high cellular ROS levels are associated with cancer, diabetes, inflammatory diseases, ischemia-related diseases, and neurodegeneration, and are thus commonly thought to contribute to human pathologies and aging 80–83.”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [80] Finkel, 2007, The common biology of cancer and ageing, Nature source
Not checked in the free run.
- cites [81] Lin, 2006, Mitochondrial dysfunction and oxidative stress in neurodegenerative diseases, Nature source
Not checked in the free run.
- cites [82] Brownlee, 2001, Biochemistry and molecular cell biology of diabetic complications, Nature source
Not checked in the free run.
- cites [83] Nathan, 2002, Points of control in inflammation, Nature source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisenone givenTransformed cells acquire capabilities such as anchorage-independent growth, limitless proliferation, and evasion of apoptotic signals.
“Transformed cells acquire capabilities such as anchorage-independent growth, limitless proliferation, and evasion of apoptotic signals.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationClinical trials using antioxidants to scavenge ROS have consistently failed, and in some cases, actually increased mortality.
“This line of thinking has led to multiple clinical trials using antioxidants to scavenge ROS, yet these trials have consistently failed, and in some cases, actually increased mortality 84–87.”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [84] Storch, 2007, Randomized, double-blind, placebo-controlled trial on symptomatic effects of coenzyme Q(10) in Parkinson disease, Arch. Neurol. source
Not checked in the free run.
- cites [85] Kang, 2009, Vitamin E, vitamin C, beta carotene, and cognitive function among women with or at risk of cardiovascular disease: the Women's Antioxidant and Cardiovascular Study, Circulation source
Not checked in the free run.
- cites [86] Lin, 2009, Vitamins C and E and beta carotene supplementation and cancer risk: a randomized controlled trial, J. Natl. Cancer Inst. source
Not checked in the free run.
- cites [87] Bjelakovic, 2007, Mortality in randomized trials of antioxidant supplements for primary and secondary prevention: systematic review and meta-analysis, J. Am. Med. Assoc. source
Not checked in the free run.
May combine two claims.
PremisecitationDepending on the level of transgene expression, Sod2 transgenic mice display growth retardation and decreased fertility.
“depending on the level of transgene expression, these mice display growth retardation and decreased fertility 90, 91.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [90] Van Remmen, 2003, Life-long reduction in MnSOD activity results in increased DNA damage and higher incidence of cancer but does not accelerate aging, Physiol. Genomics source
Not checked in the free run.
- cites [91] Raineri, 2001, Strain-dependent high-level expression of a transgene for manganese superoxide dismutase is associated with growth retardation and decreased fertility, Free Radic. Biol. Med. source
Not checked in the free run.
May combine two claims.
PremisecitationSIRT3 is present in mitochondria, where it regulates the acetylation and activity of a variety of metabolic enzymes.
“Interestingly, SIRT3 is present in mitochondria, where it regulates the acetylation and activity of a variety of metabolic enzymes, suggesting additional ways that it might affect mitochondrial ROS production 73.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [73] Hirschey, M.D. et al. SIRT3 regulates mitochondrial fatty-acid oxidation by reversible enzyme deacetylation. Nature 464, 121–125 source
Not checked in the free run.
May combine two claims.
PremisecitationCells harboring the G13997A mutation in the gene encoding the ND6 subunit of mitochondrial complex I are characterized by respiratory deficiency and high ROS production.
“Cells harboring the G13997A mutation in the gene encoding the ND6 subunit of mitochondrial complex I are characterized by respiratory deficiency and high ROS production.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [76] Ishikawa, 2008, ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis, Science source
Not checked in the free run.
- cites [77] Koshikawa, 2009, Reactive oxygen species-generating mitochondrial DNA mutation up-regulates hypoxia-inducible factor-1alpha gene transcription via phosphatidylinositol 3-kinase-Akt/protein kinase C/histone deacetylase pathway, J. Biol. Chem. source
Not checked in the free run.
May combine two claims.
InterpretationreasoningCellular stress can cause increased ROS levels, which can promote adaptation and possibly organismal fitness.
“Cellular stress can cause increased ROS levels, which can promote adaptation and possibly organismal fitness.”
Quote in the paperSubstantial claim
The paper relies on this without support.
The failure of clinical trials using antioxidants to scavenge ROS is due to the inadequacy of the damaging-only view of ROS rather than other factors.
“This line of thinking has led to multiple clinical trials using antioxidants to scavenge ROS, yet these trials have consistently failed, and in some cases, actually increased mortality 84–87.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Intracellular ROS changes might control whether HSCs and possibly other adult stem cells stay quiescent or proliferate.
“Changes in intracellular levels of ROS may also determine the balance between quiescence and proliferation of HSCs, and perhaps other adult stem cells133.”
From Stem cell aging: mechanisms, regulators and therapeutic opportunities (2014) · cites this paper as [133]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Q-cycle description switches ubiquinol to ubiquinone
MinorThe description says complex III receives ubiquinol and removes an electron from it, but then calls the same step a one-electron oxidation of ubiquinone.
“This one electron oxidation of ubiquinone results in the transient formation of ubisemiquinone (QH•).”
“Complex III receives ubiquinol at the Qo site. The Rieske iron-sulfur protein (RISP) then removes one electron from ubiquinol”
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Self-citationVitamins C and E and beta carotene supplementation and cancer risk: a randomized controlled trial
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Chemopreventive isothiocyanates induce apoptosis and caspase-3-like protease activity.
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Reactive oxygen species are downstream products of TRAF-mediated signal transduction
Chandel, N. S., Schumacker, P. T., & Arch, R. H. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m103074200 · Cited by 203 · see citing works
Self-citationReduction in glutathione peroxidase 4 increases life span through increased sensitivity to apoptosis
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The cunning little vixen: Foxo and the cycle of life and death
Hedrick, S. M. (2009) · Nature Immunology · doi:10.1038/ni.1784 · Cited by 157 · see citing works
Koshikawa, N., Hayashi, J.-I., Nakagawara, A., & Takenaga, K. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.054221 · Cited by 147 · see citing works
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Tsatmali, M., Walcott, E. C., & Crossin, K. L. (2005) · Brain Research · doi:10.1016/j.brainres.2005.01.087 · Cited by 133 · see citing works
Mitochondrial Oxidative Stress, DNA Damage, and Heart Failure
Tsutsui, H., Ide, T., & Kinugawa, S. (2006) · Antioxidants and Redox Signaling · doi:10.1089/ars.2006.8.1737 · Cited by 130 · see citing works
Regulation of the protein disulfide proteome by mitochondria in mammalian cells
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Reversible oxidation of ERK-directed protein phosphatases drives oxidative toxicity in neurons
Levinthal, D. J., & DeFranco, D. B. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m410771200 · Cited by 126 · see citing works
Wang, D., Malo, D., & Hekimi, S. (2010) · The Journal of Immunology · doi:10.4049/jimmunol.0902352 · Cited by 123 · see citing works
Gusarova, G. A., Dada, L. A., Kelly, A. M., Brodie, C., Witters, L. A., Chandel, N. S., & Sznajder, J. I. (2009) · Molecular and Cellular Biology · doi:10.1128/mcb.00054-09 · Cited by 118 · see citing works
Self-citationAntitumorigenesis of antioxidants in a transgenic Rac1 model of Kaposi's sarcoma
Ma, Q., Cavallin, L. E., Yan, B., Zhu, S., Duran, E. M., Wang, H., Hale, L. P., Dong, C., Cesarman, E., Mesri, E. A., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0812688106 · Cited by 105 · see citing works
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Regulation of alveolar epithelial function by hypoxia
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Calcium, mitochondria and oxygen sensing in the pulmonary circulation
Ward, J. P. T., Snetkov, V. A., & Aaronson, P. I. (2004) · Cell Calcium · doi:10.1016/j.ceca.2004.02.017 · Cited by 45 · see citing works
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Mitochondria: In Sickness and in Health
Nunnari, J., & Suomalainen, A. (2012) · Cell · doi:10.1016/j.cell.2012.02.035 · Cited by 3,479 · see citing works
From Krebs to clinic: glutamine metabolism to cancer therapy
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Mitochondria in innate immune responses
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Regulation of autophagy by ROS: physiology and pathology
Scherz-Shouval, R., & Elazar, Z. (2011) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2010.07.007 · Cited by 1,263 · see citing works
Metformin inhibits mitochondrial complex I of cancer cells to reduce tumorigenesis
Wheaton, W. W., Weinberg, S. E., Hamanaka, R. B., Soberanes, S., Sullivan, L. B., Anso, E., Glasauer, A., Dufour, E., Mutlu, G. M., Budigner, G. S., et al. (2014) · eLife · doi:10.7554/elife.02242 · Cited by 1,105 · see citing works
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Tebay, L. E., Robertson, H., Durant, S. T., Vitale, S. R., Penning, T. M., Dinkova-Kostova, A. T., & Hayes, J. D. (2015) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2015.06.021 · Cited by 837 · see citing works
Stem cell aging: mechanisms, regulators and therapeutic opportunities
Oh, J., Lee, Y. D., & Wagers, A. J. (2014) · Nature Medicine · doi:10.1038/nm.3651 · Cited by 796 · see citing works
Cross talk between mitochondria and NADPH oxidases
Dikalov, S. (2011) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2011.06.033 · Cited by 783 · see citing works
Taking a good look at free radicals in the aging process
Hekimi, S., Lapointe, J., & Wen, Y. (2011) · Trends in Cell Biology · doi:10.1016/j.tcb.2011.06.008 · Cited by 606 · see citing works
Mitochondrial uncoupling, ROS generation and cardioprotection
Cadenas, S. (2018) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2018.05.019 · Cited by 591 · see citing works
Cellular Metabolic Stress: Considering How Cells Respond to Nutrient Excess
Wellen, K. E., & Thompson, C. B. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.10.004 · Cited by 486 · see citing works
ROS production in phagocytes: Why, when, and where?
Dupré-Crochet, S., Erard, M., & Nüβe, O. (2013) · Journal of Leukocyte Biology · doi:10.1189/jlb.1012544 · Cited by 467 · see citing works
Hypoxia. 2. Hypoxia regulates cellular metabolism
Wheaton, W. W., & Chandel, N. S. (2011) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00485.2010 · Cited by 426 · see citing works
Self-citationMitochondrial ROS regulation of proliferating cells
Diebold, L., & Chandel, N. S. (2016) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2016.04.198 · Cited by 391 · see citing works
Self-citationSuperoxide generation by complex III: From mechanistic rationales to functional consequences
Bleier, L., & Dröse, S. (2013) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2012.12.002 · Cited by 369 · see citing works
Cardiac Aging: From Molecular Mechanisms to Significance in Human Health and Disease
Dai, D.-F., Chen, T., Johnson, S. C., Szeto, H., & Rabinovitch, P. S. (2012) · Antioxidants & Redox Signaling · doi:10.1089/ars.2011.4179 · Cited by 334 · see citing works
SIRT3 regulation of mitochondrial oxidative stress
Bause, A. S., & Haigis, M. C. (2013) · Experimental Gerontology · doi:10.1016/j.exger.2012.08.007 · Cited by 311 · see citing works
Hamanaka, R. B., Glasauer, A., Hoover, P., Yang, S., Blatt, H., Mullen, A. R., Getsios, S., Gottardi, C. J., DeBerardinis, R. J., Lavker, R. M., et al. (2013) · Science Signaling · doi:10.1126/scisignal.2003638 · Cited by 315 · see citing works
Self-citationDNA damage induces reactive oxygen species generation through the H2AX-Nox1/Rac1 pathway
Kang, M. A., So, E.-Y., Simons, A. L., Spitz, D. R., & Ouchi, T. (2012) · Cell Death & Disease · doi:10.1038/cddis.2011.134 · Cited by 311 · see citing works
“A well-characterized pathway of ROS production and regulation is through the p53 tumor suppressor and the mitochondria.(21,24) However, the”
BackgroundT cells and reactive oxygen species
Belikov, A. V., Schraven, B., & Simeoni, L. (2015) · Journal of Biomedical Science · doi:10.1186/s12929-015-0194-3 · Cited by 264 · see citing works
Fanconi Anemia Proteins Function in Mitophagy and Immunity
Sumpter, R., Sirasanagandla, S., Fernández, Á. F., Wei, Y., Dong, X., Franco, L., Zou, Z., Marchal, C., Lee, M. Y., Clapp, D. W., et al. (2016) · Cell · doi:10.1016/j.cell.2016.04.006 · Cited by 250 · see citing works
“…levels of mtROS are required for many homeostatic functions (including control of cell growth, differentiation, death, senescence and inflammation (Hamanaka and Chandel, 2010)), alterations in cellular signaling pathways and genotoxic stress arising from dysregulated mtROS production are…”
Mitochondrial Dysfunction in Alzheimer’s Disease and the Rationale for Bioenergetics Based Therapies
Onyango, I. G., Dennis, J., & Khan, S. M. (2016) · Aging and Disease · doi:10.14336/ad.2015.1007 · Cited by 260 · see citing works
Na(+) controls hypoxic signalling by the mitochondrial respiratory chain
Hernansanz-Agustín, P., Choya-Foces, C., Carregal-Romero, S., Ramos, E., Oliva, T., Villa-Piña, T., Moreno, L., Izquierdo-Álvarez, A., Cabrera-García, J. D., Cortés, A., et al. (2020) · Nature · doi:10.1038/s41586-020-2551-y · Cited by 238 · see citing works
Redox interplay between mitochondria and peroxisomes
Lismont, C., Nordgren, M., Van Veldhoven, P. P., & Fransen, M. (2015) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2015.00035 · Cited by 214 · see citing works
Hong, X., Isern, J., Campanario, S., Perdiguero, E., Ramírez-Pardo, I., Segalés, J., Hernansanz-Agustín, P., Curtabbi, A., Deryagin, O., Pollán, A., et al. (2022) · Cell stem cell · doi:10.1016/j.stem.2022.07.009 · Cited by 213 · see citing works
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“Under normal conditions, transiently elevated ROS is known to be involved in cellular signaling pathways [28,29] and mitochondrial functions are correctly maintained through proper redox balance.”
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BackgroundStructural basis of mitochondrial transcription
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A Synopsis of the Associations of Oxidative Stress, ROS, and Antioxidants with Diabetes Mellitus
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The Role of Mitochondrial Stress in Muscle Wasting Following Severe Burn Trauma
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- Authors
- Hamanaka, R. B., & Chandel, N. S.
- Affiliations
- Northwestern University (US)
- Corresponding author
- Chandel, Navdeep S.
- Venue
- Trends in Biochemical Sciences
- Publisher
- Elsevier BV
- Published
- 2010-09
- Volume
- 35
- Issue
- 9
- Pages
- 505-513
- ISSN
- 0968-0004 (ISSN-L)
- PMC
- PMC2933303
- OpenAlex
- W2040856926
- Semantic Scholar
- d15e7733a704b214863986af876214605f411a00
- Cited by
- 1,011
- References
- 99
- Citations by year
- 2026: 54 · 2025: 51 · 2024: 61 · 2023: 58 · 2022: 51 · 2021: 68 · 2020: 75 · 2019: 67 · 2018: 72 · 2017: 65 · 2016: 72 · 2015: 54 · 2014: 74 · 2013: 65 · 2012: 72
- FWCI
- 5.28
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Trends in Biochemical Sciences (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institutes of Health
- National Heart, Lung, and Blood Institute (F32HL099007)
- National Cancer Institute (R01CA123067, T32CA070085)
- National Institute of General Medical Sciences (R01GM60472-10, R01GM060472)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Redox biology and oxidative stress
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Keywords
- mitochondrial reactive oxygen species, signal transduction, oxidative homeostasis, NADPH oxidase, mitochondrial ROS production, cellular energy state, metabolite signaling, cellular stress signaling, stem cell maintenance, oncogenic transformation, cell survival
- MeSH terms
- Animals, Cell Physiological Phenomena, Humans, Mitochondria, Signal Transduction, Reactive Oxygen Species
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-10.
Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-10.
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