Guidelines for the use and interpretation of assays for monitoring autophagy

Klionsky, Daniel J., Abdalla, Fabio C., Abeliovich, Hagai, Abraham, Robert T., Acevedo-Arozena, Abraham, Adeli, Khosrow, Agholme, Lotta, Agnello, Maria, Agostinis, Patrizia, Aguirre-Ghiso, Julio A., Ahn, Hyung Jun, Ait-Mohamed, Ouardia, Ait-Si-Ali, Slimane, Akematsu, Takahiko, Akira, Shizuo, Al-Younes, Hesham M., Al-Zeer, Munir A., Albert, Matthew L., Albin, Roger L., Alegre-Abarrategui, Javier, Aleo, Maria Francesca, Alirezaei, Mehrdad, Almasan, Alexandru, Almonte-Becerril, Maylin, Amano, Atsuo, Amaravadi, Ravi K., Amarnath, Shoba, Amer, Amal O., Andrieu-Abadie, Nathalie, Anantharam, Vellareddy, Ann, David K., Anoopkumar-Dukie, Shailendra, Aoki, Hiroshi, Apostolova, Nadezda, Arancia, Giuseppe, Aris, John P., Asanuma, Katsuhiko, Asare, Nana Y.O., Ashida, Hisashi, Askanas, Valerie, Askew, David S., Auberger, Patrick, Baba, Misuzu, Backues, Steven K., Baehrecke, Eric H., Bahr, Ben A., Bai, Xue-Yuan, Bailly, Yannick, Baiocchi, Robert, Baldini, Giulia, Balduini, Walter, Ballabio, Andrea, Bamber, Bruce A., Bampton, Edward T.W., Juhász, Gábor, Bartholomew, Clinton R., Bassham, Diane C., Bast, Robert C., Batoko, Henri, Bay, Boon-Huat, Beau, Isabelle, Béchet, Daniel M., Begley, Thomas J., Behl, Christian, Behrends, Christian, Bekri, Soumeya, Bellaire, Bryan, Bendall, Linda J., Benetti, Luca, Berliocchi, Laura, Bernardi, Henri, Bernassola, Francesca, Besteiro, Sébastien, Bhatia-Kissova, Ingrid, Bi, Xiaoning, Biard-Piechaczyk, Martine, Blum, Janice S., Boise, Lawrence H., Bonaldo, Paolo, Boone, David L., Bornhauser, Beat C., Bortoluci, Karina R., Bossis, Ioannis, Bost, Frédéric, Bourquin, Jean-Pierre, Boya, Patricia, Boyer-Guittaut, Michaël, Bozhkov, Peter V., Brady, Nathan R, Brancolini, Claudio, Brech, Andreas, Brenman, Jay E., Brennand, Ana, Bresnick, Emery H., Brest, Patrick, Bridges, Dave, Bristol, Molly L., Brookes, Paul S., Brown, Eric J., Brumell, John H., Brunetti-Pierri, Nicola, Brunk, Ulf T., Bulman, Dennis E., Bultman, Scott J., Bultynck, Geert, Burbulla, Lena F., Bursch, Wilfried, Butchar, Jonathan P., Buzgariu, Wanda, Bydlowski, Sergio P., Cadwell, Ken, Cahová, Monika, Cai, Dongsheng, Cai, Jiyang, Cai, Qian, Calabretta, Bruno, Calvo-Garrido, Javier, Camougrand, Nadine, Campanella, Michelangelo, Campos-Salinas, Jenny, Candi, Eleonora, Cao, Lizhi, Caplan, Allan B., Carding, Simon R., Cardoso, Sandra M., Carew, Jennifer S., Carlin, Cathleen R., Carmignac, Virginie, Carneiro, Leticia A.M., Carra, Serena, Caruso, Rosario A., Casari, Giorgio, Casas, Caty, Castino, Roberta, Cebollero, Eduardo, Cecconi, Francesco, Celli, Jean, Chaachouay, Hassan, Chae, Han-Jung, Chai, Chee-Yin, Chan, David C., Chan, Edmond Y., Chang, Raymond Chuen-Chung, Che, Chi-Ming, Chen, Ching-Chow, Chen, Guang-Chao, Chen, Guo-Qiang, Chen, Min, Chen, Quan, Chen, Steve S.-L., Chen, WenLi, Chen, Xi, Chen, Xiangmei, Chen, Xiequn, Chen, Ye-Guang, Chen, Yingyu, Chen, Yongqiang, Chen, Yu-Jen, Chen, Zhixiang, Cheng, Alan, Cheng, Christopher H.K., Cheng, Yan, Cheong, Heesun, Cheong, Jae-Ho, Cherry, Sara, Chess-Williams, Russ, Cheung, Zelda H., Chevet, Eric, Chiang, Hui-Ling, Chiarelli, Roberto, Chiba, Tomoki, Chin, Lih-Shen, Chiou, Shih-Hwa, Chisari, Francis V., Cho, Chi Hin, Cho, Dong-Hyung, Choi, Augustine M.K., Choi, DooSeok, Choi, Kyeong Sook, Choi, Mary E., Chouaib, Salem, Choubey, Divaker, Choubey, Vinay, Chu, Charleen T., Chuang, Tsung-Hsien, Chueh, Sheau-Huei, Chun, Taehoon, Chwae, Yong-Joon, Chye, Mee-Len, Ciarcia, Roberto, Ciriolo, Maria R., Clague, Michael J., Clark, Robert S.B., Clarke, Peter G.H., Clarke, Robert, Codogno, Patrice, Coller, Hilary A., Colombo, María I., Comincini, Sergio, Condello, Maria, Condorelli, Fabrizio, Cookson, Mark R., Coombs, Graham H., Coppens, Isabelle, Corbalan, Ramon, Cossart, Pascale, Costelli, Paola, Costes, Safia, Coto-Montes, Ana, Couve, Eduardo, Coxon, Fraser P., Cregg, James M., Crespo, José L., Cronjé, Marianne J., Cuervo, Ana Maria, Cullen, Joseph J., Czaja, Mark J., D'Amelio, Marcello, Darfeuille-Michaud, Arlette, Davids, Lester M., Davies, Faith E., De Felici, Massimo, de Groot, John F., de Haan, Cornelis A.M., De Martino, Luisa, De Milito, Angelo, De Tata, Vincenzo, Debnath, Jayanta, Degterev, Alexei, Dehay, Benjamin, Delbridge, Lea M.D., Demarchi, Francesca, Deng, Yi Zhen, Dengjel, Jörn, Dent, Paul, Denton, Donna, Deretic, Vojo, Desai, Shyamal D., Devenish, Rodney J., Di Gioacchino, Mario, Di Paolo, Gilbert, Di Pietro, Chiara, Díaz-Araya, Guillermo, Díaz-Laviada, Inés, Diaz-Meco, Maria T., Diaz-Nido, Javier, Dikic, Ivan, Dinesh-Kumar, Savithramma P., Ding, Wen-Xing, Distelhorst, Clark W., Diwan, Abhinav, Djavaheri-Mergny, Mojgan, Dokudovskaya, Svetlana, Dong, Zheng, Dorsey, Frank C., Dosenko, Victor, Dowling, James J., Doxsey, Stephen, Dreux, Marlène, Drew, Mark E., Duan, Qiuhong, Duchosal, Michel A., Duff, Karen E., Dugail, Isabelle, Durbeej, Madeleine, Duszenko, Michael, Edelstein, Charles L., Edinger, Aimee L., Egea, Gustavo, Eichinger, Ludwig, Eissa, N. Tony, Ekmekcioglu, Suhendan, El-Deiry, Wafik S., Elazar, Zvulun, Elgendy, Mohamed, Ellerby, Lisa M., Eng, Kai Er, Engelbrecht, Anna-Mart, Engelender, Simone, Erenpreisa, Jekaterina, Escalante, Ricardo, Esclatine, Audrey, Eskelinen, Eeva-Liisa, Espert, Lucile, Espina, Virginia, Fan, Huizhou, Fan, Jia, Fan, Qi-Wen, Fan, Zhen, Fang, Shengyun, Fang, Yongqi, Fanto, Manolis, Fanzani, Alessandro, Farkas, Thomas, Farre, Jean-Claude, Faure, Mathias, Fechheimer, Marcus, Feng, Carl G., Feng, Jian, Feng, Qili, Feng, Youji, Fésüs, László, Feuer, Ralph, Figueiredo-Pereira, Maria E., Fimia, Gian Maria, Fingar, Diane C., Finkbeiner, Steven, Finkel, Toren, Finley, Kim D., Fiorito, Filomena, Fisher, Edward A., Fisher, Paul B., Flajolet, Marc, Florez-McClure, Maria L., Florio, Salvatore, Fon, Edward A., Fornai, Francesco, Fortunato, Franco, Fotedar, Rati, Fowler, Daniel H., Fox, Howard S., Franco, Rodrigo, Frankel, Lisa B., Fransen, Marc, Fuentes, José M., Fueyo, Juan, Fujii, Jun, Fujisaki, Kozo, Fujita, Eriko, Fukuda, Mitsunori, Furukawa, Ruth H., Gaestel, Matthias, Gailly, Philippe, Gajewska, Malgorzata, Galliot, Brigitte, Galy, Vincent, Ganesh, Subramaniam, Ganetzky, Barry, Ganley, Ian G., Gao, Fen-Biao, Gao, George F., Gao, Jinming, Garcia, Lorena, Garcia-Manero, Guillermo, Garcia-Marcos, Mikel, Garmyn, Marjan, Gartel, Andrei L., Gatti, Evelina, Gautel, Mathias, Gawriluk, Thomas R., Gegg, Matthew E., Geng, Jiefei, Germain, Marc, Gestwicki, Jason E., Gewirtz, David A., Ghavami, Saeid, Ghosh, Pradipta, Giammarioli, Anna M., Giatromanolaki, Alexandra N., Gibson, Spencer B., Gilkerson, Robert W., Ginger, Michael L., Ginsberg, Henry N., Golab, Jakub, Goligorsky, Michael S., Golstein, Pierre, Gomez-Manzano, Candelaria, Goncu, Ebru, Gongora, Céline, Gonzalez, Claudio D., Gonzalez, Ramon, González-Estévez, Cristina, González-Polo, Rosa Ana, Gonzalez-Rey, Elena, Gorbunov, Nikolai V., Gorski, Sharon, Goruppi, Sandro, Gottlieb, Roberta A., Gozuacik, Devrim, Granato, Giovanna Elvira, Grant, Gary D., Green, Kim N., Gregorc, Ales, Gros, Frédéric, Grose, Charles, Grunt, Thomas W., Gual, Philippe, Guan, Jun-Lin, Guan, Kun-Liang, Guichard, Sylvie M., Gukovskaya, Anna S., Gukovsky, Ilya, Gunst, Jan, Gustafsson, Åsa B., Halayko, Andrew J., Hale, Amber N., Halonen, Sandra K., Hamasaki, Maho, Han, Feng, Han, Ting, Hancock, Michael K., Hansen, Malene, Harada, Hisashi, Harada, Masaru, Hardt, Stefan E., Harper, J. Wade, Harris, Adrian L., Harris, James, Harris, Steven D., Hashimoto, Makoto, Haspel, Jeffrey A., Hayashi, Shin-ichiro, Hazelhurst, Lori A., He, Congcong, He, You-Wen, Hébert, Marie-Josée, Heidenreich, Kim A., Helfrich, Miep H., Helgason, Gudmundur V., Henske, Elizabeth P., Herman, Brian, Herman, Paul K., Hetz, Claudio, Hilfiker, Sabine, Hill, Joseph A., Hocking, Lynne J., Hofman, Paul, Hofmann, Thomas G., Höhfeld, Jörg, Holyoake, Tessa L., Hong, Ming-Huang, Hood, David A., Hotamisligil, Gökhan S., Houwerzijl, Ewout J., Høyer-Hansen, Maria, Hu, Bingren, Hu, Chien-an A., Hu, Hong-Ming, Hua, Ya, Huang, Canhua, Huang, Ju, Huang, Shengbing, Huang, Wei-Pang, Huber, Tobias B., Huh, Won-Ki, Hung, Tai-Ho, Hupp, Ted R., Hur, Gang Min, Hurley, James B., Hussain, Sabah N.A., Hussey, Patrick J., Hwang, Jung Jin, Hwang, Seungmin, Ichihara, Atsuhiro, Ilkhanizadeh, Shirin, Inoki, Ken, Into, Takeshi, Iovane, Valentina, Iovanna, Juan L., Ip, Nancy Y., Isaka, Yoshitaka, Ishida, Hiroyuki, Isidoro, Ciro, Isobe, Ken-ichi, Iwasaki, Akiko, Izquierdo, Marta, Izumi, Yotaro, Jaakkola, Panu M., Jäättelä, Marja, Jackson, George R., Jackson, William T., Janji, Bassam, Jendrach, Marina, Jeon, Ju-Hong, Jeung, Eui-Bae, Jiang, Hong, Jiang, Hongchi, Jiang, Jean X., Jiang, Ming, Jiang, Qing, Jiang, Xuejun, Jiang, Xuejun, Jiménez, Alberto, Jin, Meiyan, Jin, Shengkan V., Joe, Cheol O., Johansen, Terje, Johnson, Daniel E., Johnson, Gail V.W., Jones, Nicola L., Joseph, Bertrand, Joseph, Suresh K., Joubert, Annie M., Juhász, Gábor, Juillerat-Jeanneret, Lucienne, Jung, Chang Hwa, Jung, Yong-Keun, Kaarniranta, Kai, Kaasik, Allen, Kabuta, Tomohiro, Kadowaki, Motoni, Kågedal, Katarina, Kamada, Yoshiaki, Kaminskyy, Vitaliy O., Kampinga, Harm H., Kanamori, Hiromitsu, Kang, Chanhee, Kang, Khong Bee, Kang, Kwang Il, Kang, Rui, Kang, Yoon-A, Kanki, Tomotake, Kanneganti, Thirumala-Devi, Kanno, Haruo, Kanthasamy, Anumantha G., Kanthasamy, Arthi, Karantza, Vassiliki, Kaushal, Gur P., Kaushik, Susmita, Kawazoe, Yoshinori, Ke, Po-Yuan, Kehrl, John H., Kelekar, Ameeta, Kerkhoff, Claus, Kessel, David H., Khalil, Hany, Kiel, Jan A.K.W., Kiger, Amy A., Kihara, Akio, Kim, Deok Ryong, Kim, Do-Hyung, Kim, Dong-Hou, Kim, Eun-Kyoung, Kim, Hyung-Ryong, Kim, Jae-Sung, Kim, Jeong Hun, Kim, Jin Cheon, Kim, John K., Kim, Peter K., Kim, Seong Who, Kim, Yong-Sun, Kim, Yonghyun, Kimchi, Adi, Kimmelman, Alec C., King, Jason S., Kinsella, Timothy J., Kirkin, Vladimir, Kirshenbaum, Lorrie A., Kitamoto, Katsuhiko, Kitazato, Kaio, Klein, Ludger, Klimecki, Walter T., Klucken, Jochen, Knecht, Erwin, Ko, Ben C.B., Koch, Jan C., Koga, Hiroshi, Koh, Jae-Young, Koh, Young Ho, Koike, Masato, Komatsu, Masaaki, Kominami, Eiki, Kong, Hee Jeong, Kong, Wei-Jia, Korolchuk, Viktor I., Kotake, Yaichiro, Koukourakis, Michael I., Flores, Juan B. Kouri, Kovács, Attila L., Kraft, Claudine, Krainc, Dimitri, Krämer, Helmut, Kretz-Remy, Carole, Krichevsky, Anna M., Kroemer, Guido, Krüger, Rejko, Krut, Oleg, Ktistakis, Nicholas T., Kuan, Chia-Yi, Kucharczyk, Roza, Kumar, Ashok, Kumar, Raj, Kumar, Sharad, Kundu, Mondira, Kung, Hsing-Jien, Kurz, Tino, Kwon, Ho Jeong, La Spada, Albert R., Lafont, Frank, Lamark, Trond, Landry, Jacques, Lane, Jon D., Lapaquette, Pierre, Laporte, Jocelyn F., László, Lajos, Lavandero, Sergio, Lavoie, Josée N., Layfield, Robert, Lazo, Pedro A., Le, Weidong, Le Cam, Laurent, Ledbetter, Daniel J., Lee, Alvin J.X., Lee, Byung-Wan, Lee, Gyun Min, Lee, Jongdae, lee, Ju-hyun, Lee, Michael, Lee, Myung-Shik, Lee, Sug Hyung, Leeuwenburgh, Christiaan, Legembre, Patrick, Legouis, Renaud, Lehmann, Michael, Lei, Huan-Yao, Lei, Qun-Ying, Leib, David A., Leiro, José, Lemasters, John J., Lemoine, Antoinette, Lesniak, Maciej S., Lev, Dina, Levenson, Victor V., Levine, Beth, Levy, Efrat, Li, Faqiang, Li, Jun-Lin, Li, Lian, Li, Sheng, Li, Weijie, Li, Xue-Jun, Li, Yan-Bo, Li, Yi-Ping, Liang, Chengyu, Liang, Qiangrong, Liao, Yung-Feng, Liberski, Pawel P., Lieberman, Andrew, Lim, Hyunjung J., Lim, Kah-Leong, Lim, Kyu, Lin, Chiou-Feng, Lin, Fu-Cheng, Lin, Jian, Lin, Jiandie D., Lin, Kui, Lin, Wan-Wan, Lin, Weei-Chin, Lin, Yi-Ling, Linden, Rafael, Lingor, Paul, Lippincott-Schwartz, Jennifer, Lisanti, Michael P., Liton, Paloma B., Liu, Bo, Liu, Chun-Feng, Liu, Kaiyu, Liu, Leyuan, Liu, Qiong A., Liu, Wei, Liu, Young-Chau, Liu, Yule, Lockshin, Richard A., Lok, Chun-Nam, Lonial, Sagar, Loos, Benjamin, Lopez-Berestein, Gabriel, López-Otín, Carlos, Lossi, Laura, Lotze, Michael T., Low, Peter, Lu, Binfeng, Lu, Bingwei, Lu, Bo, Lu, Zhen, Luciano, Fréderic, Lukacs, Nicholas W., Lund, Anders H., Lynch-Day, Melinda A., Ma, Yong, Macian, Fernando, MacKeigan, Jeff P., Macleod, Kay F., Madeo, Frank, Maiuri, Luigi, Maiuri, Maria Chiara, Malagoli, Davide, Malicdan, May Christine V., Malorni, Walter, Man, Na, Mandelkow, Eva-Maria, Manon, Stephen, Manov, Irena, Mao, Kai, Mao, Xiang, Mao, Zixu, Marambaud, Philippe, Marazziti, Daniela, Marcel, Yves L., Marchbank, Katie, Marchetti, Piero, Marciniak, Stefan J., Marcondes, Mateus, Mardi, Mohsen, Marfe, Gabriella, Mariño, Guillermo, Markaki, Maria, Marten, Mark R., Martin, Seamus J., Martinand-Mari, Camille, Martinet, Wim, Martinez-Vicente, Marta, Masini, Matilde, Matarrese, Paola, Matsuo, Saburo, Matteoni, Raffaele, Mayer, Andreas, Mazure, Nathalie M., McConkey, David J., McConnell, Melanie J., McDermott, Catherine, McDonald, Christine, McInerney, Gerald M., McKenna, Sharon L., McLaughlin, BethAnn, McLean, Pamela J., McMaster, Christopher R., McQuibban, G. Angus, Meijer, Alfred J., Meisler, Miriam H., Meléndez, Alicia, Melia, Thomas J., Melino, Gerry, Mena, Maria A., Menendez, Javier A., Menna-Barreto, Rubem F. S., Menon, Manoj B., Menzies, Fiona M., Mercer, Carol A., Merighi, Adalberto, Merry, Diane E., Meschini, Stefania, Meyer, Christian G., Meyer, Thomas F., Miao, Chao-Yu, Miao, Jun-Ying, Michels, Paul A.M., Michiels, Carine, Mijaljica, Dalibor, Milojkovic, Ana, Minucci, Saverio, Miracco, Clelia, Miranti, Cindy K., Mitroulis, Ioannis, Miyazawa, Keisuke, Mizushima, Noboru, Mograbi, Baharia, Mohseni, Simin, Molero, Xavier, Mollereau, Bertrand, Mollinedo, Faustino, Momoi, Takashi, Monastyrska, Iryna, Monick, Martha M., Monteiro, Mervyn J., Moore, Michael N., Mora, Rodrigo, Moreau, Kevin, Moreira, Paula I., Moriyasu, Yuji, Moscat, Jorge, Mostowy, Serge, Mottram, Jeremy C., Motyl, Tomasz, Moussa, Charbel E.-H., Müller, Sylke, Muller, Sylviane, Münger, Karl, Münz, Christian, Murphy, Leon O., Murphy, Maureen E., Musarò, Antonio, Mysorekar, Indira, Nagata, Eiichiro, Nagata, Kazuhiro, Nahimana, Aimable, Nair, Usha, Nakagawa, Toshiyuki, Nakahira, Kiichi, Nakano, Hiroyasu, Nakatogawa, Hitoshi, Nanjundan, Meera, Naqvi, Naweed I., Narendra, Derek P., Narita, Masashi, Navarro, Miguel, Nawrocki, Steffan T., Nazarko, Taras Y., Nemchenko, Andriy, Netea, Mihai G., Neufeld, Thomas P., Ney, Paul A., Nezis, Ioannis P., Nguyen, Huu Phuc, Nie, Daotai, Nishino, Ichizo, Nislow, Corey, Nixon, Ralph A., Noda, Takeshi, Noegel, Angelika A., Nogalska, Anna, Noguchi, Satoru, Notterpek, Lucia, Novak, Ivana, Nozaki, Tomoyoshi, Nukina, Nobuyuki, Nürnberger, Thorsten, Nyfeler, Beat, Obara, Keisuke, Oberley, Terry D., Oddo, Salvatore, Ogawa, Michinaga, Ohashi, Toya, Okamoto, Koji, Oleinick, Nancy L., Oliver, F. Javier, Olsen, Laura J., Olsson, Stefan, Opota, Onya, Osborne, Timothy F., Ostrander, Gary K., Otsu, Kinya, Ou, Jing-hsiung James, Ouimet, Mireille, Overholtzer, Michael, Ozpolat, Bulent, Paganetti, Paolo, Pagnini, Ugo, Pallet, Nicolas, Palmer, Glen E., Palumbo, Camilla, Pan, Tianhong, Panaretakis, Theocharis, Pandey, Udai Bhan, Papackova, Zuzana, Papassideri, Issidora, Paris, Irmgard, Park, Junsoo, Park, Ohkmae K., Parys, Jan B., Parzych, Katherine R., Patschan, Susann, Patterson, Cam, Pattingre, Sophie, Pawelek, John M., Peng, Jianxin, Perlmutter, David H., Perrotta, Ida, Perry, George, Pervaiz, Shazib, Peter, Matthias, Peters, Godefridus J., Petersen, Morten, Petrovski, Goran, Phang, James M., Piacentini, Mauro, Pierre, Philippe, Pierrefite-Carle, Valérie, Pierron, Gérard, Pinkas-Kramarski, Ronit, Piras, Antonio, Piri, Natik, Platanias, Leonidas C., Pöggeler, Stefanie, Poirot, Marc, Poletti, Angelo, Poüs, Christian, Pozuelo-Rubio, Mercedes, Prætorius-Ibba, Mette, Prasad, Anil, Prescott, Mark, Priault, Muriel, Produit-Zengaffinen, Nathalie, Progulske-Fox, Ann, Proikas-Cezanne, Tassula, Przedborski, Serge, Przyklenk, Karin, Puertollano, Rosa, Puyal, Julien, Qian, Shu-Bing, Qin, Liang, Qin, Zheng-Hong, Quaggin, Susan E., Raben, Nina, Rabinowich, Hannah, Rabkin, Simon W., Rahman, Irfan, Rami, Abdelhaq, Ramm, Georg, Randall, Glenn, Randow, Felix, Rao, V. Ashutosh, Rathmell, Jeffrey C., Ravikumar, Brinda, Ray, Swapan K., Reed, Bruce H., Reed, John C., Reggiori, Fulvio, Régnier-Vigouroux, Anne, Reichert, Andreas S., Reiners, Jr., John J., Reiter, Russel J., Ren, Jun, Revuelta, José L., Rhodes, Christopher J., Ritis, Konstantinos, Rizzo, Elizete, Robbins, Jeffrey, Roberge, Michel, Roca, Hernan, Roccheri, Maria C., Rocchi, Stephane, Rodemann, H. Peter, Rodríguez de Córdoba, Santiago, Rohrer, Bärbel, Roninson, Igor B., Rosen, Kirill, Rost-Roszkowska, Magdalena M., Rouis, Mustapha, Rouschop, Kasper M.A., Rovetta, Francesca, Rubin, Brian P., Rubinsztein, David C., Ruckdeschel, Klaus, Rucker, Edmund B., Rudich, Assaf, Rudolf, Emil, Ruiz-Opazo, Nelson, Russo, Rossella, Rusten, Tor Erik, Ryan, Kevin M., Ryter, Stefan W., Sabatini, David M., Sadoshima, Junichi, Saha, Tapas, Saitoh, Tatsuya, Sakagami, Hiroshi, Sakai, Yasuyoshi, Salekdeh, Ghasem Hoseini, Salomoni, Paolo, Salvaterra, Paul M., Salvesen, Guy, Salvioli, Rosa, Sanchez, Anthony M.J., Sánchez-Alcázar, José A., Sánchez-Prieto, Ricardo, Sandri, Marco, Sankar, Uma, Sansanwal, Poonam, Santambrogio, Laura, Saran, Shweta, Sarkar, Sovan, Sarwal, Minnie, Sasakawa, Chihiro, Sasnauskiene, Ausra, Sass, Miklós, Sato, Ken, Sato, Miyuki, Schapira, Anthony H.V., Scharl, Michael, Schätzl, Hermann M., Scheper, Wiep, Schiaffino, Stefano, Schneider, Claudio, Schneider, Marion E., Schneider-Stock, Regine, Schoenlein, Patricia V., Schorderet, Daniel F., Schüller, Christoph, Schwartz, Gary K., Scorrano, Luca, Sealy, Linda, Seglen, Per O., Segura-Aguilar, Juan, Seiliez, Iban, Seleverstov, Oleksandr, Sell, Christian, Seo, Jong Bok, Separovic, Duska, Setaluri, Vijayasaradhi, Setoguchi, Takao, Settembre, Carmine, Shacka, John J., Shanmugam, Mala, Shapiro, Irving M., Shaulian, Eitan, Shaw, Reuben J., Shelhamer, James H., Shen, Han-Ming, Shen, Wei-Chiang, Sheng, Zu-Hang, Shi, Yang, Shibuya, Kenichi, Shidoji, Yoshihiro, Shieh, Jeng-Jer, Shih, Chwen-Ming, Shimada, Yohta, Shimizu, Shigeomi, Shintani, Takahiro, Shirihai, Orian S., Shore, Gordon C., Sibirny, Andriy A., Sidhu, Stan B., Sikorska, Beata, Silva-Zacarin, Elaine C.M., Simmons, Alison, Simon, Anna Katharina, Simon, Hans-Uwe, Simone, Cristiano, Simonsen, Anne, Sinclair, David A., Singh, Rajat, Sinha, Debasish, Sinicrope, Frank A., Sirko, Agnieszka, Siu, Parco M., Sivridis, Efthimios, Skop, Vojtech, Skulachev, Vladimir P., Slack, Ruth S., Smaili, Soraya S., Smith, Duncan R., Soengas, Maria S., Soldati, Thierry, Song, Xueqin, Sood, Anil K., Soong, Tuck Wah, Sotgia, Federica, Spector, Stephen A., Spies, Claudia D., Springer, Wolfdieter, Srinivasula, Srinivasa M., Stefanis, Leonidas, Steffan, Joan S., Stendel, Ruediger, Stenmark, Harald, Stephanou, Anastasis, Stern, Stephan T., Sternberg, Cinthya, Stork, Björn, Strålfors, Peter, Subauste, Carlos S., Sui, Xinbing, Sulzer, David, Sun, Jiaren, Sun, Shi-Yong, Sun, Zhi-Jun, Sung, Joseph J.Y., Suzuki, Kuninori, Suzuki, Toshihiko, Swanson, Michele S., Swanton, Charles, Sweeney, Sean T., Sy, Lai-King, Szabadkai, György, Tabas, Ira, Taegtmeyer, Heinrich, Tafani, Marco, Takács-Vellai, Krisztina, Takano, Yoshitaka, Takegawa, Kaoru, Takemura, Genzou, Takeshita, Fumihiko, Talbot, Nicholas J., Tan, Kevin S.W., Tanaka, Keiji, Tanaka, Kozo, Tang, Daolin, Tang, Dingzhong, Tanida, Isei, Tannous, Bakhos A., Tavernarakis, Nektarios, Taylor, Graham S., Taylor, Gregory A., Taylor, J. Paul, Terada, Lance S., Terman, Alexei, Tettamanti, Gianluca, Thevissen, Karin, Thompson, Craig B., Thorburn, Andrew, Thumm, Michael, Tian, FengFeng, Tian, Yuan, Tocchini-Valentini, Glauco, Tolkovsky, Aviva M., Tomino, Yasuhiko, Tönges, Lars, Tooze, Sharon A., Tournier, Cathy, Tower, John, Towns, Roberto, Trajkovic, Vladimir, Travassos, Leonardo H., Tsai, Ting-Fen, Tschan, Mario P., Tsubata, Takeshi, Tsung, Allan, Turk, Boris, Turner, Lorianne S., Tyagi, Suresh C., Uchiyama, Yasuo, Ueno, Takashi, Umekawa, Midori, Umemiya-Shirafuji, Rika, Unni, Vivek K., Vaccaro, Maria I., Valente, Enza Maria, Van den Berghe, Greet, van der Klei, Ida J., van Doorn, Wouter G., van Dyk, Linda F., van Egmond, Marjolein, van Grunsven, Leo A., Vandenabeele, Peter, Vandenberghe, Wim P., Vanhorebeek, Ilse, Vaquero, Eva C., Velasco, Guillermo, Vellai, Tibor, Vicencio, José Miguel, Vierstra, Richard D., Vila, Miquel, Vindis, Cécile, Viola, Giampietro, Viscomi, Maria Teresa, Voitsekhovskaja, Olga V., von Haefen, Clarissa, Votruba, Marcela, Wada, Keiji, Wade-Martins, Richard, Walker, Cheryl L., Walsh, Craig M., Walter, Jochen, Wan, Xiang-Bo, Wang, Aimin, Wang, Chenguang, Wang, Dawei, Wang, Fan, Wang, Fen, Wang, Guanghui, Wang, Haichao, Wang, Hong-Gang, Wang, Horng-Dar, Wang, Jin, Wang, Ke, Wang, Mei, Wang, Richard C., Wang, Xinglong, Wang, Xiujie J., Wang, Ying-Jan, Wang, Yipeng, Wang, Zhen-Bo, Wang, Zhigang Charles, Wang, Zhinong, Wansink, Derick G., Ward, Diane M., Watada, Hirotaka, Waters, Sarah L., Webster, Paul, Wei, Lixin, Weihl, Conrad C., Weiss, William A., Welford, Scott M., Wen, Long-Ping, Whitehouse, Caroline A., Whitton, J. Lindsay, Whitworth, Alexander J., Wileman, Tom, Wiley, John W., Wilkinson, Simon, Willbold, Dieter, Williams, Roger L., Williamson, Peter R., Wouters, Bradly G., Wu, Chenghan, Wu, Dao-Cheng, Wu, William K.K., Wyttenbach, Andreas, Xavier, Ramnik J., Xi, Zhijun, Xia, Pu, Xiao, Gengfu, Xie, Zhiping, Xie, Zhonglin, Xu, Da-zhi, Xu, Jianzhen, Xu, Liang, Xu, Xiaolei, Yamamoto, Ai, Yamamoto, Akitsugu, Yamashina, Shunhei, Yamashita, Michiaki, Yan, Xianghua, Yanagida, Mitsuhiro, Yang, Dun-Sheng, Yang, Elizabeth, Yang, Jin-Ming, Yang, Shi Yu, Yang, Wannian, Yang, Wei Yuan, Yang, Zhifen, Yao, Meng-Chao, Yao, Tso-Pang, Yeganeh, Behzad, Yen, Wei-Lien, Yin, Jia-Jing, Yin, Xiao-Ming, Yoo, Ook-Joon, Yoon, Gyesoon, Yoon, Seung-Yong, Yorimitsu, Tomohiro, Yoshikawa, Yuko, Yoshimori, Tamotsu, Yoshimoto, Kohki, You, Ho Jin, Youle, Richard J., Younes, Anas, Yu, Li, Yu, Long, Yu, Seong-Woon, Yu, Wai Haung, Yuan, Zhi-Min, Yue, Zhenyu, Yun, Cheol-Heui, Yuzaki, Michisuke, Zabirnyk, Olga, Silva-Zacarin, Elaine, Zacks, David, Zacksenhaus, Eldad, Zaffaroni, Nadia, Zakeri, Zahra, Zeh, III, Herbert J., Zeitlin, Scott O., Zhang, Hong, Zhang, Hui-Ling, Zhang, Jianhua, Zhang, Jing-Pu, Zhang, Lin, Zhang, Long, Zhang, Ming-Yong, Zhang, Xu Dong, Zhao, Mantong, Zhao, Yi-Fang, Zhao, Ying, Zhao, Zhizhuang J., Zheng, Xiaoxiang, Zhivotovsky, Boris, Zhong, Qing, Zhou, Cong-Zhao, Zhu, Changlian, Zhu, Wei-Guo, Zhu, Xiao-Feng, Zhu, Xiongwei, Zhu, Yuangang, Zoladek, Teresa, Zong, Wei-Xing, Zorzano, Antonio, Zschocke, Jürgen, Zuckerbraun, Brian·2012·Autophagy
DOI 10.4161/auto.19496

Cites (894)

Items 201–400 of 896

  1. In search of an “autophagomometer”
    David Chaim Rubinsztein, Ana María Cuervo, Brinda Ravikumar, Sovan Sarkar, Viktor I. Korolchuk, Susmita Kaushik, Daniel J. Klionsky · 2009 · Autophagy
  2. Atg8: an autophagy-related ubiquitin-like protein family.
    Shpilka, Tomer, Weidberg, Hilla, Pietrokovski, Shmuel, Elazar, Zvulun · 2011 · Genome biology
  3. Physiological functions of Atg6/Beclin 1: a unique autophagy-related protein
    Cao, Yang, Klionsky, Daniel J · 2007 · Cell Research
  4. Nutrient starvation elicits an acute autophagic response mediated by Ulk1 dephosphorylation and its subsequent dissociation from AMPK
    Libin Shang, She Chen, Fenghe Du, Li Shen, Liping Zhao, Xiaodong Wang · 2011 · Proceedings of the National Academy of Sciences
  5. Autophagy is defective in collagen VI muscular dystrophies, and its reactivation rescues myofiber degeneration
    Grumati, Paolo, Coletto, Luisa, Sabatelli, Patrizia, Cescon, Matilde, Angelin, Alessia, Bertaggia, Enrico, Blaauw, Bert, Urciuolo, Anna, Tiepolo, Tania, Merlini, Luciano et al. · 2010 · Nature Medicine
  6. Essential Roles of Atg5 and FADD in Autophagic Cell Death
    Jong-Ok Pyo, Mi-Hee Jang, Yun‐Kyung Kwon, Ho-June Lee, Joon-Il Jun, Ha‐Na Woo, Dong-Hyung Cho, BoYoun Choi, Heuiran Lee, Joo-Hang Kim et al. · 2005 · Journal of Biological Chemistry
  7. INFLUENCE OF GLUCAGON, AN INDUCER OF CELLULAR AUTOPHAGY, ON SOME PHYSICAL PROPERTIES OF RAT LIVER LYSOSOMES
    Deter, Russell L., de Duve, Christian · 1967 · The Journal of Cell Biology
  8. Counting Cytokinesis Proteins Globally and Locally in Fission Yeast
    Jian‐Qiu Wu, Thomas Dean Pollard · 2005 · Science
  9. Autophagic Fungal Cell Death Is Necessary for Infection by the Rice Blast Fungus
    Claire Veneault‐Fourrey, Madhumita Barooah, Martin John Egan, Gavin E. Wakley, Nicholas J. Talbot · 2006 · Science
  10. Consequences of the selective blockage of chaperone-mediated autophagy
    Massey, Ashish C., Kaushik, Susmita, Sovak, Guy, Kiffin, Roberta, Cuervo, Ana Maria · 2006 · Proceedings of the National Academy of Sciences
  11. An Atg4B Mutant Hampers the Lipidation of LC3 Paralogues and Causes Defects in Autophagosome Closure
    Naonobu Fujita, Mitsuko Hayashi, Hiromi Fukumoto, Hiroko Omori, Akitsugu Yamamoto, Takeshi Noda, Tamotsu Yoshimori · 2008 · Molecular Biology of the Cell
  12. Matrix Protein 2 of Influenza A Virus Blocks Autophagosome Fusion with Lysosomes
    Gannagé, Monique, Dormann, Dorothee, Albrecht, Randy, Dengjel, Jörn, Torossi, Tania, Rämer, Patrick C., Lee, Monica, Strowig, Till, Arrey, Frida, Conenello, Gina et al. · 2009 · Cell Host & Microbe
  13. Autophagy and related mechanisms of lysosome-mediated protein degradation
    William A. Dunn · 1994 · Trends in Cell Biology
  14. Blocked Autophagy Sensitizes Resistant Carcinoma Cells to Radiation Therapy
    Anja Apel, Ingrid Herr, Heinz Schwarz, H. Peter Rodemann, Andreas Mayer · 2008 · Cancer Research
  15. Identification of Barkor as a mammalian autophagy-specific factor for Beclin 1 and class III phosphatidylinositol 3-kinase
    Qiming Sun, Weiliang Fan, Keling Chen, X. Ding, She Chen, Qing Zhong · 2008 · Proceedings of the National Academy of Sciences of the United States of America
  16. Effect of physiologic hyperinsulinemia on skeletal muscle protein synthesis and breakdown in man.
    Gelfand, R A, Barrett, E J · 1987 · Journal of Clinical Investigation
  17. The apoptosis/autophagy paradox: autophagic vacuolization before apoptotic death
    Rosa A. González‐Polo, Patricia Boya, Anne‐Laure Pauleau, Abdelali Jalil, Nathanaël Larochette, Sylvie Souquère, Eeva‐Liisa Eskelinen, Gérard Pierron, Paul Säftig, Guido Kroemer · 2005 · Journal of Cell Science
  18. The dynamic interaction of AMBRA1 with the dynein motor complex regulates mammalian autophagy
    Sabrina Di Bartolomeo, Marco Corazzari, Francesca Nazio, Serafina Oliverio, Gaia Lisi, Manuela Antonioli, Vittoria Pagliarini, Silvia Matteoni, Claudia Fuoco, Luigi Giunta et al. · 2010 · The Journal of Cell Biology
  19. Disease-causing mutations in Parkin impair mitochondrial ubiquitination, aggregation, and HDAC6-dependent mitophagy
    Joo‐Yong Lee, Yoshito Nagano, J. Paul Taylor, Kah Leong Lim, Tso‐Pang Yao · 2010 · The Journal of Cell Biology
  20. A novel assay to study autophagy: regulation of autophagosome vacuole size by amino acid deprivation
    Munafó, Daniela B., Colombo, María I. · 2001 · Journal of Cell Science
  21. Autophagy Reduces Acute Ethanol-Induced Hepatotoxicity and Steatosis in Mice
    Ding, Wen–Xing, Li, Min, Chen, Xiaoyun, Ni, Hong–Min, Lin, Chih–Wen, Gao, Wentao, Lu, Binfeng, Stolz, Donna B., Clemens, Dahn L., Yin, Xiao–Ming · 2010 · Gastroenterology
  22. Autophagy pathway intersects with HIV-1 biosynthesis and regulates viral yields in macrophages
    Kyei, George B., Dinkins, Christina, Davis, Alexander S., Roberts, Esteban, Singh, Sudha B., Dong, Chunsheng, Wu, Li, Kominami, Eiki, Ueno, Takashi, Yamamoto, Akitsugu et al. · 2009 · Journal of Cell Biology
  23. In vivo requirement for Atg5 in antigen presentation by dendritic cells
    Lee, Heung Kyu, Mattei, Lisa M., Steinberg, Benjamin E., Alberts, Philipp, Lee, Yun Hee, Chervonsky, Alexander, Mizushima, Noboru, Grinstein, Sergio, Iwasaki, Akiko · 2010 · Immunity
  24. Postfertilization Autophagy of Sperm Organelles Prevents Paternal Mitochondrial DNA Transmission
    Sara Al Rawi, Sophie Louvet‐Vallée, Abderazak Djeddi, Martin Sachse, Emmanuel Culetto, Connie Hajjar, Lynn Boyd, Renaud Legouis, Vincent Galy · 2011 · Science
  25. p62 Is a Key Regulator of Nutrient Sensing in the mTORC1 Pathway
    Ángeles Durán, Ramars Amanchy, Juan F. Linares, Jayashree P. Joshi, Shadi Abu‐Baker, Aleksey Porollo, Malene Hansen, Jorge Moscat, Maria Teresa Díaz-Meco · 2011 · Molecular Cell
  26. Coordination of membrane events during autophagy by multiple class III PI3-kinase complexes
    Anne Simonsen, Sharon A. Tooze · 2009 · The Journal of Cell Biology
  27. Dual-color superresolution imaging of genetically expressed probes within individual adhesion complexes
    Hari Shroff, Catherine G. Galbraith, James A. Galbraith, Helen White, Jennifer M. Gillette, Scott G. Olenych, Michael W. Davidson, Eric Betzig · 2007 · Proceedings of the National Academy of Sciences
  28. Role of autophagy in G2019S‐LRRK2‐associated neurite shortening in differentiated SH‐SY5Y cells
    Edward D. Plowey, Salvatore J. Cherra, Yongjian Liu, Charleen T. Chu · 2008 · Journal of Neurochemistry
  29. An Atg9-containing compartment that functions in the early steps of autophagosome biogenesis
    Mari, Muriel, Griffith, Janice, Rieter, Ester, Krishnappa, Lakshmi, Klionsky, Daniel J., Reggiori, Fulvio · 2010 · Journal of Cell Biology
  30. Programmed Autophagy in the Drosophila Fat Body Is Induced by Ecdysone through Regulation of the PI3K Pathway
    Tor Erik Rusten, Karine Lindmo, Gábor Juhász, Miklós Sass, Per O. Seglen, Andreas Brech, Harald Stenmark · 2004 · Developmental Cell
  31. Inhibition of Autophagy Prevents Hippocampal Pyramidal Neuron Death after Hypoxic-Ischemic Injury
    Koike, Masato, Shibata, Masahiro, Tadakoshi, Masao, Gotoh, Kunihito, Komatsu, Masaaki, Waguri, Satoshi, Kawahara, Nobutaka, Kuida, Keisuke, Nagata, Shigekazu, Kominami, Eiki et al. · 2008 · The American Journal of Pathology
  32. The autophagy machinery is required to initiate hepatitis C virus replication
    Marlène Dreux, Pablo Gastaminza, Stefan F. Wieland, Francis V. Chisari · 2009 · Proceedings of the National Academy of Sciences
  33. The Atg1-Atg13 Complex Regulates Atg9 and Atg23 Retrieval Transport from the Pre-Autophagosomal Structure
    Reggiori, Fulvio, Tucker, Katherine A., Stromhaug, Per E., Klionsky, Daniel J. · 2004 · Developmental Cell
  34. Autophagy Is an Essential Component of Drosophila Immunity against Vesicular Stomatitis Virus
    Spencer S. Shelly, Nina I. Lukinova, Shelly Bambina, Allison Berman, Sara R. Cherry · 2009 · Immunity
  35. Does bafilomycin A 1 block the fusion of autophagosomes with lysosomes?
    Daniel J. Klionsky, Zvulun Elazar, Per O. Seglen, David Chaim Rubinsztein · 2008 · Autophagy
  36. Small molecule regulators of autophagy identified by an image-based high-throughput screen
    Lihong Zhang, Jia Yu, Heling Pan, Ping Hu, Hao Yan, Wenqing Cai, Hong Zhu, Albert D. Yu, Xin Xie, Dawei Ma et al. · 2007 · Proceedings of the National Academy of Sciences
  37. Degradation of Paternal Mitochondria by Fertilization-Triggered Autophagy in C. elegans Embryos
    Miyuki Sato, Ken Sato · 2011 · Science
  38. siRNA Screening of the Kinome Identifies ULK1 as a Multidomain Modulator of Autophagy
    Edmond Y.W. Chan, Serkan Kır, Sharon A. Tooze · 2007 · Journal of Biological Chemistry
  39. NF-κB Activation Represses Tumor Necrosis Factor-α-induced Autophagy
    Mojgan Djavaheri‐Mergny, Manuela Amelotti, Julie Mathieu, Françoise Besançon, Chantal Bauvy, Sylvie Souquère, Gérard Pierron, Patrice Codogno · 2006 · Journal of Biological Chemistry
  40. AMP-activated Protein Kinase and the Regulation of Autophagic Proteolysis
    Daniel Meley, Chantal Bauvy, Judith H.P.M. Houben-Weerts, Peter F. Dubbelhuis, Mariette T.J. Helmond, Patrice Codogno, Alfred J. Meijer · 2006 · Journal of Biological Chemistry
  41. Autophagy Protects the Proximal Tubule from Degeneration and Acute Ischemic Injury
    Kimura, Tomonori, Takabatake, Yoshitsugu, Takahashi, Atsushi, Kaimori, Jun-ya, Matsui, Isao, Namba, Tomoko, Kitamura, Harumi, Niimura, Fumio, Matsusaka, Taiji, Soga, Tomoyoshi et al. · 2011 · Journal of the American Society of Nephrology
  42. Autophagy machinery mediates macroendocytic processing and entotic cell death by targeting single membranes
    Florey, Oliver, Kim, Sung Eun, Sandoval, Cynthia P., Haynes, Cole M., Overholtzer, Michael · 2011 · Nature Cell Biology
  43. Ku-0063794 is a specific inhibitor of the mammalian target of rapamycin (mTOR)
    Juan Manuel García‐Martínez, Jennifer Moran, Rosemary G. Clarke, Alex Gray, Sabina C. Cosulich, Christine M. Chresta, Dario R. Alessi · 2009 · Biochemical Journal
  44. Autophagy enhances the presentation of endogenous viral antigens on MHC class I molecules during HSV-1 infection
    Luc English, Magali Chemali, Johanne Duron, Christiane Rondeau, Annie Laplante, Diane Gingras, Diane Alexander, David A. Leib, Christopher C. Norbury, Roger Lippé et al. · 2009 · Nature Immunology
  45. Regulation of autophagy by a beclin 1-targeted microRNA, miR-30a, in cancer cells
    Hua Zhu C, Hao Wu, Xiuping Liu, Biao Li, Yun Chen, Xingcong Ren, Chang‐Gong Liu, Jinming Yang · 2009 · Autophagy
  46. Intracellular Protein Catabolism and its Control During Nutrient Deprivation and Supply
    Glenn E. Mortimore, A.R. Pösö · 1987 · Annual Review of Nutrition
  47. Autophagy requires endoplasmic reticulum targeting of the PI3-kinase complex via Atg14L
    Matsunaga, Kohichi, Morita, Eiji, Saitoh, Tatsuya, Akira, Shizuo, Ktistakis, Nicholas T., Izumi, Tetsuro, Noda, Takeshi, Yoshimori, Tamotsu · 2010 · Journal of Cell Biology
  48. Ceramide-mediated Macroautophagy Involves Inhibition of Protein Kinase B and Up-regulation of Beclin 1
    Francesca Scarlatti, Chantal Bauvy, Annamaria Ventruti, Giusy Sala, Françoise Cluzeaud, Alain Vandewalle, Riccardo Ghidoni, Patrice Codogno · 2004 · Journal of Biological Chemistry
  49. Regulation of Autophagy by Extracellular Signal-Regulated Protein Kinases During 1-Methyl-4-Phenylpyridinium-Induced Cell Death
    Jian-hui Zhu, Craig Horbinski, Fengli Guo, Simon C. Watkins, Yasuo Uchiyama, Charleen T. Chu · 2007 · American Journal Of Pathology
  50. Amino acid balance across tissues of the forearm in postabsorptive man. Effects of insulin at two dose levels
    Thomas Pozefsky, Philip Felig, Jordan D. Tobin, J. Stuart Soeldner, George F. Cahill · 1969 · Journal of Clinical Investigation
  51. Microtubules Facilitate Autophagosome Formation and Fusion of Autophagosomes with Endosomes
    Robert Köchl, Xiao Wen Hu, Edmond Y.W. Chan, Sharon A. Tooze · 2005 · Traffic
  52. Kinase-Inactivated ULK Proteins Inhibit Autophagy via Their Conserved C-Terminal Domains Using an Atg13-Independent Mechanism
    Edmond Y.W. Chan, Andrea Longatti, Nicole C. McKnight, Sharon A. Tooze · 2008 · Molecular and Cellular Biology
  53. C. elegans Screen Identifies Autophagy Genes Specific to Multicellular Organisms
    Tian, Ye, Li, Zhipeng, Hu, Wanqiu, Ren, Haiyan, Tian, E., Zhao, Yu, Lu, Qun, Huang, Xinxin, Yang, Peiguo, Li, Xin et al. · 2010 · Cell
  54. Piecemeal Microautophagy of Nucleus in Saccharomyces cerevisiae
    Paul Roberts, Sharon Moshitch-Moshkovitz, Erik Kvam, Eileen T O'Toole, Mark Winey, David S. Goldfarb · 2003 · Molecular Biology of the Cell
  55. Quantifying Western blots: Pitfalls of densitometry
    Max Gassmann, Beat Grenacher, Bianca Rohde, Johannes Vogel · 2009 · Electrophoresis
  56. AMP-activated protein kinase: nature's energy sensor
    David Carling, Faith V. Mayer, Matthew J. Sanders, Steve J. Gamblin · 2011 · Nature Chemical Biology
  57. Dual Role of JNK1-mediated phosphorylation of Bcl-2 in autophagy and apoptosis regulation
    Wei, Yongjie, Sinha, Sangita C., Levine, Beth · 2008 · Autophagy
  58. An Atg1/Atg13 Complex with Multiple Roles in TOR-mediated Autophagy Regulation
    Yu-Yun Chang, Thomas P. Neufeld · 2009 · Molecular Biology of the Cell
  59. Structure of the Human mTOR Complex I and Its Implications for Rapamycin Inhibition
    Calvin K. Yip, Kazuyoshi Murata, Thomas Walz, David M. Sabatini, Seong Anthony Woo Kang · 2010 · Molecular Cell
  60. Role of non-canonical Beclin 1-independent autophagy in cell death induced by resveratrol in human breast cancer cells
    Scarlatti, F, Maffei, R, Beau, I, Codogno, P, Ghidoni, R · 2008 · Cell Death & Differentiation
  61. Akt inhibition promotes autophagy and sensitizes PTEN-null tumors to lysosomotropic agents
    Michael Y. Degtyarev, Ann M. G. L. De Mazière, Christine Orr, Jie Ming Lin, Brian B. Lee, Janet Tien, Wei Wei Prior, Suzanne van Dijk, Hong Wu, Daniel C. Gray et al. · 2008 · The Journal of Cell Biology
  62. Mitochondria removal by autophagy
    Ke Wang, Daniel J. Klionsky · 2011 · Autophagy
  63. FLIP-mediated autophagy regulation in cell death control
    Lee, Jong-Soo, Li, Qinglin, Lee, June-Yong, Lee, Sun-Hwa, Jeong, Joseph H., Lee, Hye-Ra, Chang, Heesoon, Zhou, Fu-Chun, Gao, Shou-Jiang, Liang, Chengyu et al. · 2009 · Nature Cell Biology
  64. Cytoplasmic dynein-dependent vesicular transport from early to late endosomes [published erratum appears in J Cell Biol 1994 Feb;124(3):397]
    Fernando Aniento · 1993 · The Journal of Cell Biology
  65. p62/SQSTM1 cooperates with Parkin for perinuclear clustering of depolarized mitochondria
    Okatsu, Kei, Saisho, Keiko, Shimanuki, Midori, Nakada, Kazuto, Shitara, Hiroshi, Sou, Yu‐shin, Kimura, Mayumi, Sato, Shigeto, Hattori, Nobutaka, Komatsu, Masaaki et al. · 2010 · Genes to Cells
  66. Exogenous amino acids stimulate net muscle protein synthesis in the elderly.
    Volpi, E, Ferrando, A A, Yeckel, C W, Tipton, K D, Wolfe, R R · 1998 · Journal of Clinical Investigation
  67. 5′-triphosphate-siRNA: turning gene silencing and Rig-I activation against melanoma
    Poeck, Hendrik, Besch, Robert, Maihoefer, Cornelius, Renn, Marcel, Tormo, Damia, Morskaya, Svetlana Shulga, Kirschnek, Susanne, Gaffal, Evelyn, Landsberg, Jennifer, Hellmuth, Johannes et al. · 2008 · Nature Medicine
  68. Complex Inhibitory Effects of Nitric Oxide on Autophagy
    Sovan Sarkar, Viktor I. Korolchuk, Maurizio Renna, Sara Imarisio, Angeleen Fleming, Andrea J. Williams, Moisés Garcı́a-Arencibia, Claudia Rose, Shouqing Luo, Benjamin R. Underwood et al. · 2011 · Molecular Cell
  69. Autophagy, Not Apoptosis, Is Essential for Midgut Cell Death in Drosophila
    Denton, Donna, Shravage, Bhupendra, Simin, Rachel, Mills, Kathryn, Berry, Deborah L., Baehrecke, Eric H., Kumar, Sharad · 2009 · Current Biology
  70. Hepatic Autophagy Is Suppressed in the Presence of Insulin Resistance and Hyperinsulinemia
    Huiyu Liu, Jianmin Han, Sophia Y. Cao, Tao Hong, Degen Zhuo, Jianbo Shi, Zhenqi Liu, Wenhong Cao · 2009 · Journal of Biological Chemistry
  71. Isolation and Characterization of Rat Liver Amphisomes
    Berg, Trond Olav, Fengsrud, Monica, Strømhaug, Per Eivind, Berg, Trond, Seglen, Per O. · 1998 · Journal of Biological Chemistry
  72. Coronaviruses Hijack the LC3-I-Positive EDEMosomes, ER-Derived Vesicles Exporting Short-Lived ERAD Regulators, for Replication
    Fulvio Reggiori, Iryna Monastyrska, Monique H. Verheije, Tito Calí, Mustafa Ulaşlı, Siro Bianchi, Riccardo Bernasconi, Cornelis A. M. de Haan, Maurizio Molinari · 2010 · Cell Host & Microbe
  73. Cell death by autophagy: facts and apparent artefacts
    Denton, D, Nicolson, S, Kumar, S · 2012 · Cell Death & Differentiation
  74. Distinct Autophagosomal-Lysosomal Fusion Mechanism Revealed by Thapsigargin-Induced Autophagy Arrest
    Ian G. Ganley, Pui‐Mun Wong, Noor Gammoh, Xuejun Jiang · 2011 · Molecular Cell
  75. Ammonia-induced autophagy is independent of ULK1/ULK2 kinases
    Heesun Cheong, Tullia Lindsten, Junmin Wu, Chao Lü, Craig B. Thompson · 2011 · Proceedings of the National Academy of Sciences
  76. Autophagy in immunity and cell‐autonomous defense against intracellular microbes
    Vojo P. Deretic · 2011 · Immunological Reviews
  77. PKR-Dependent Xenophagic Degradation of Herpes Simplex Virus Type 1
    Zsolt Tallóczy, Herbert W. Virgin, Beth Levine · 2006 · Autophagy
  78. Nanoscale resolution in GFP-based microscopy
    Katrin I. Willig, Robert R. Kellner, Rebecca Medda, Birka Hein, Stefan Jakobs, Stefan W. Hell · 2006 · Nature Methods
  79. Ref(2)P, the <i>Drosophila melanogaster</i> homologue of mammalian p62, is required for the formation of protein aggregates in adult brain
    Nezis, Ioannis P., Simonsen, Anne, Sagona, Antonia P., Finley, Kim, Gaumer, Sébastien, Contamine, Didier, Rusten, Tor Erik, Stenmark, Harald, Brech, Andreas · 2008 · The Journal of Cell Biology
  80. The Dynamics of Autophagy Visualised in Live Cells: from Autophagosome Formation to Fusion with Endo/lysosomes
    Edward T. W. Bampton, Christoph G. Goemans, Dhevahi Niranjan, Noboru Mizushima, Aviva M. Tolkovsky · 2005 · Autophagy
  81. Mechanism of Cargo Selection in the Cytoplasm to Vacuole Targeting Pathway
    Shintani, Takahiro, Huang, Wei-Pang, Stromhaug, Per E., Klionsky, Daniel J. · 2002 · Developmental Cell
  82. Major histocompatibility complex class II‐restricted presentation of a cytosolic antigen by autophagy
    Nimmerjahn, Falk, Milosevic, Slavoljub, Behrends, Uta, Jaffee, Elizabeth M., Pardoll, Drew M., Bornkamm, Georg W., Mautner, Josef · 2003 · European Journal of Immunology
  83. Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic adapters NBR1 and p62/SQSTM1
    Steingrim Svenning, Trond Lamark, Kirsten Krause, Terje Johansen · 2011 · Autophagy
  84. PARTICIPATION OF LYSOSOMES IN CELLULAR AUTOPHAGY INDUCED IN RAT LIVER BY GLUCAGON
    Deter, Russell L., Baudhuin, Pierre, de Duve, Christian · 1967 · The Journal of Cell Biology
  85. WIPI-1α (WIPI49), a member of the novel 7-bladed WIPI protein family, is aberrantly expressed in human cancer and is linked to starvation-induced autophagy
    Tassula Proikas‐Cezanne, Scott Waddell, Anja Gaugel, Tancred Frickey, Andrei N. Lupas, Alfred Nordheim · 2004 · Oncogene
  86. The autophagy gene <i>ATG5</i> plays an essential role in B lymphocyte development
    Miller, Brian C., Zhao, Zijiang, Stephenson, Linda M., Cadwell, Ken, Pua, Heather H., Lee, Heung Kyu, Mizushima, Noboru, Iwasaki, Akiko, He, You-Wen, Swat, Wojciech et al. · 2008 · Autophagy
  87. Dissecting the dynamic turnover of GFP-LC3 in the autolysosome
    Hong‐Min Ni, Abigail B. Bockus, Ann L. Wozniak, Kellyann Jones, Steven A. Weinman, Xiao‐Ming Yin, Wen‐Xing Ding · 2011 · Autophagy
  88. Adaptation of Hansenula polymorpha to methanol: a transcriptome analysis
    van Zutphen, Tim, Baerends, Richard JS, Susanna, Kim A, de Jong, Anne, Kuipers, Oscar P, Veenhuis, Marten, van der Klei, Ida J · 2010 · BMC Genomics
  89. Domain-specific mutations in sequestosome 1 (SQSTM1) cause familial and sporadic Paget’s disease.
    Hocking, L. J. · 2002 · Human Molecular Genetics
  90. Chemical modulators of autophagy as biological probes and potential therapeutics
    Angeleen Fleming, Takeshi Noda, Tamotsu Yoshimori, David Chaim Rubinsztein · 2010 · Nature Chemical Biology
  91. Cargo Proteins Facilitate the Formation of Transport Vesicles in the Cytoplasm to Vacuole Targeting Pathway
    Takahiro Shintani, Daniel J. Klionsky · 2004 · Journal of Biological Chemistry
  92. Atg17 Functions in Cooperation with Atg1 and Atg13 in Yeast Autophagy
    Yukiko Kabeya, Yoshiaki Kamada, Misuzu Baba, Hirosato Takikawa, Mitsuru Sasaki, Yoshinori Ohsumi · 2005 · Molecular Biology of the Cell
  93. Screen for Chemical Modulators of Autophagy Reveals Novel Therapeutic Inhibitors of mTORC1 Signaling
    Balgi, Aruna D., Fonseca, Bruno D., Donohue, Elizabeth, Tsang, Trevor C. F., Lajoie, Patrick, Proud, Christopher G., Nabi, Ivan R., Roberge, Michel · 2009 · PLoS ONE
  94. microRNA‐101 is a potent inhibitor of autophagy
    Lisa B. Frankel, Jiayu Wen, Michael James Lees, Maria Helena Høyer-Hansen, Thomas Farkas, Anders Krogh, Marja Jäättelä, Anders Henrik Lund · 2011 · The EMBO Journal
  95. Autophagy and Lipid Metabolism Coordinately Modulate Life Span in Germline-less C. elegans
    Lapierre, Louis R., Gelino, Sara, Meléndez, Alicia, Hansen, Malene · 2011 · Current Biology
  96. Two endoplasmic reticulum-associated degradation (ERAD) systems for the novel variant of the mutant dysferlin: ubiquitin/proteasome ERAD(I) and autophagy/lysosome ERAD(II)
    Fujita, Eriko, Kouroku, Yoriko, Isoai, Atsushi, Kumagai, Hiromichi, Misutani, Akifumi, Matsuda, Chie, Hayashi, Yukiko K., Momoi, Takashi · 2007 · Human Molecular Genetics
  97. Regulation of the autophagy protein LC3 by phosphorylation
    Salvatore J. Cherra, Scott M. Kulich, Guy T. Uechi, Manimalha Balasubramani, John A. Mountzouris, Billy W. Day, Charleen T. Chu · 2010 · The Journal of Cell Biology
  98. The ATG1/ATG13 Protein Kinase Complex Is Both a Regulator and a Target of Autophagic Recycling in Arabidopsis
    Anongpat Suttangkakul, Faqiang Li, Taijoon Chung, Richard David Vierstra · 2011 · The Plant Cell
  99. Mitophagy in Yeast Occurs through a Selective Mechanism
    Kanki, Tomotake, Klionsky, Daniel J. · 2008 · Journal of Biological Chemistry
  100. Isolation of rat liver lysosomes by isopycnic centrifugation in a metrizamide gradient.
    Robert Wattiaux, Simone Wattiaux‐De Coninck, Marie‐France Ronveaux‐Dupal, F Dubois · 1978 · The Journal of Cell Biology
  101. Ammonia Derived from Glutaminolysis Is a Diffusible Regulator of Autophagy
    Christina H. Eng, Ker Yu, Judy Lucas, Eileen White, Robert T. Abraham · 2010 · Science Signaling
  102. Biochemical, Cellular, and In vivo Activity of Novel ATP-Competitive and Selective Inhibitors of the Mammalian Target of Rapamycin
    Ker Yu, Lourdes Toral‐Barza, Celine Shi, Weiguo Zhang, Judy Lucas, Boris Shor, Jamie Kim, Jeroen C. Verheijen, Kevin Joseph Curran, David J. Malwitz et al. · 2009 · Cancer Research
  103. Tracker Dyes to Probe Mitochondrial Autophagy (Mitophagy) in Rat Hepatocytes
    Sara Rodríguez‐Enríquez, Insil Kim, Robert T. Currin, John J. Lemasters · 2006 · Autophagy
  104. PpAtg30 Tags Peroxisomes for Turnover by Selective Autophagy
    Farré, Jean-Claude, Manjithaya, Ravi, Mathewson, Richard D., Subramani, Suresh · 2008 · Developmental Cell
  105. AMPK promotes skeletal muscle autophagy through activation of forkhead FoxO3a and interaction with Ulk1
    Anthony M. J. Sanchez, Alfredo Csibi, Audrey Raibon, Karen Cornille, Stéphanie Gay, Henri Bernardi, Robin B. Candau · 2011 · Journal of Cellular Biochemistry
  106. Participation of Autophagy in Storage of Lysosomes in Neurons from Mouse Models of Neuronal Ceroid-Lipofuscinoses (Batten Disease)
    Koike, Masato, Shibata, Masahiro, Waguri, Satoshi, Yoshimura, Kentaro, Tanida, Isei, Kominami, Eiki, Gotow, Takahiro, Peters, Christoph, von Figura, Kurt, Mizushima, Noboru et al. · 2005 · The American Journal of Pathology
  107. Genome‐wide monitoring of wine yeast gene expression during alcoholic fermentation
    Tristan Rossignol, Laurent Dulau, Anne Julien, Bruno Blondin · 2003 · Yeast
  108. The Cvt pathway as a model for selective autophagy
    Lynch-Day, Melinda A., Klionsky, Daniel J. · 2010 · FEBS Letters
  109. Rapamycin is a neuroprotective treatment for traumatic brain injury
    Shlomit Erlich, Alexander G. Alexandrovich, Esther Shohami, Ronit Pinkas‐Kramarski · 2007 · Neurobiology of Disease
  110. Altered Autophagy in Human Adipose Tissues in Obesity
    Julia Kovsan, Matthias Blüher, Tanya Tarnovscki, Nora Klöting, Boris Kirshtein, Liron Madar, Iris Shai, Rachel Golan, Ilana Harman‐Boehm, Michael R. Schön et al. · 2010 · The Journal of Clinical Endocrinology & Metabolism
  111. Membrane protein sorting: biosynthesis, transport and processing of yeast vacuolar alkaline phosphatase.
    Klionsky, D.J., Emr, S.D. · 1989 · The EMBO Journal
  112. Shigella Phagocytic Vacuolar Membrane Remnants Participate in the Cellular Response to Pathogen Invasion and Are Regulated by Autophagy
    Nicolas Dupont, Sandra Lacas‐Gervais, Julie Bertout, Irit Paz, Barbara Frêche, Guy Tran Van Nhieu, F. Gisou van der Goot, Philippe Jean Sansonetti, Frank Lafont · 2009 · Cell Host & Microbe
  113. p62/SQSTM1: A Missing Link between Protein Aggregates and the Autophagy Machinery
    Bjørkøy, Geir, Lamark, Trond, Johansen, Terje · 2006 · Autophagy
  114. Development and Application of a Salmonid EST Database and cDNA Microarray: Data Mining and Interspecific Hybridization Characteristics
    Matthew L. Rise, Kristian R. von Schalburg, Gordon D. Brown, Melanie A. Mawer, Robert H. Devlin, Nathanael Kuipers, Maura Busby, Marianne Beetz-Sargent, Roberto Alberto, A. Ross Gibbs et al. · 2004 · Genome Research
  115. ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci
    Taijoon Chung, Allison R. Phillips, Richard David Vierstra · 2010 · The Plant Journal
  116. Chaperone-mediated autophagy in protein quality control
    Esperanza Arias, Ana María Cuervo · 2010 · Current Opinion in Cell Biology
  117. The PINK1/Parkin-mediated mitophagy is compromised by PD-associated mutations
    Geisler, Sven, Holmström, Kira M., Treis, Angela, Skujat, Diana, Weber, Stephanie S., Fiesel, Fabienne C., Kahle, Philipp J., Springer, Wolfdieter · 2010 · Autophagy
  118. Induction of Autophagy in Axonal Dystrophy and Degeneration
    Wang, Qing Jun, Ding, Yaomei, Kohtz, Stave, Mizushima, Noboru, Cristea, Ileana M., Rout, Michael P., Chait, Brian T., Zhong, Yun, Heintz, Nathaniel, Yue, Zhenyu · 2006 · The Journal of Neuroscience
  119. Regulation of targets of mTOR (mammalian target of rapamycin) signalling by intracellular amino acid availability
    BEUGNET, Anne, TEE, Andrew R., TAYLOR, Peter M., PROUD, Christopher G. · 2003 · Biochemical Journal
  120. A Novel Protein Complex Linking the δ2 Glutamate Receptor and Autophagy
    Yue, Zhenyu, Horton, Antony, Bravin, Monica, DeJager, Philip L., Selimi, Fekrije, Heintz, Nathaniel · 2002 · Neuron
  121. Unique properties of lamp2a compared to other lamp2 isoforms
    Ana María Cuervo, James Fred Dice · 2000 · Journal of Cell Science
  122. Characterization of protein transport between successive compartments of the Golgi apparatus: Asymmetric properties of donor and acceptor activities in a cell-free system
    William E. Balch, James E. Rothman · 1985 · Archives of Biochemistry and Biophysics
  123. A method for incorporating macromolecules into adherent cells.
    Paul L. McNeil, Robert F. Murphy, Frederick Lanni, D. Lansing Taylor · 1984 · The Journal of Cell Biology
  124. A comprehensive glossary of autophagy-related molecules and processes (2ndedition)
    Daniel J. Klionsky, Eric H. Baehrecke, John Hunter Brumell, Charleen T. Chu, Patrice Codogno, Ana María Cuervo, Jayanta Debnath, Vojo P. Deretic, Zvulun Elazar, Eeva‐Liisa Eskelinen et al. · 2011 · Autophagy
  125. Trehalose ameliorates dopaminergic and tau pathology in parkin deleted/tau overexpressing mice through autophagy activation
    Rodríguez-Navarro, Jose A., Rodríguez, Laura, Casarejos, María J., Solano, Rosa M., Gómez, Ana, Perucho, Juan, Cuervo, Ana María, García de Yébenes, Justo, Mena, María A. · 2010 · Neurobiology of Disease
  126. Autophagic degradation of tau in primary neurons and its enhancement by trehalose
    Krüger, Ulrike, Wang, Yipeng, Kumar, Satish, Mandelkow, Eva-Maria · 2012 · Neurobiology of Aging
  127. A Population of Rat Liver Lysosomes Responsible for the Selective Uptake and Degradation of Cytosolic Proteins
    Ana María Cuervo, James Fred Dice, Erwin Knecht · 1997 · Journal of Biological Chemistry
  128. Dual roles of autophagy in the survival of <i>Caenorhabditis elegans</i> during starvation
    Kang, Chanhee, You, Young-jai, Avery, Leon · 2007 · Genes &amp; Development
  129. Akt and Autophagy Cooperate to Promote Survival of Drug-Resistant Glioma
    Qi‐Wen Fan, Christine Cheng, Chris Hackett, Morri E. Feldman, Benjamin T. Houseman, Theodore P. Nicolaides, Daphne Adele Haas-Kogan, Charles David James, Scott A. Oakes, Jayanta Debnath et al. · 2010 · Science Signaling
  130. The ATG12-Conjugating Enzyme ATG10 Is Essential for Autophagic Vesicle Formation in Arabidopsis thaliana
    Allison R. Phillips, Anongpat Suttangkakul, Richard David Vierstra · 2008 · Genetics
  131. The inositol 1,4,5-trisphosphate receptor regulates autophagy through its interaction with Beclin 1
    Vicencio, J M, Ortiz, C, Criollo, A, Jones, A W E, Kepp, O, Galluzzi, L, Joza, N, Vitale, I, Morselli, E, Tailler, M et al. · 2009 · Cell Death &amp; Differentiation
  132. Transmembrane transport and intracellular kinetics of amino acids in human skeletal muscle
    Biolo, G., Fleming, R. Y., Maggi, S. P., Wolfe, R. R. · 1995 · American Journal of Physiology-Endocrinology and Metabolism
  133. Microtubules Support Production of Starvation-induced Autophagosomes but Not Their Targeting and Fusion with Lysosomes
    Fass, Ephraim, Shvets, Elena, Degani, Ilan, Hirschberg, Koret, Elazar, Zvulun · 2006 · Journal of Biological Chemistry
  134. Autophagosome targeting and membrane curvature sensing by Barkor/Atg14(L)
    Fan, Weiliang, Nassiri, Ashley, Zhong, Qing · 2011 · Proceedings of the National Academy of Sciences
  135. Prelysosomal convergence of autophagic and endocytic pathways
    Gordon, Paul B., Seglen, Per O. · 1988 · Biochemical and Biophysical Research Communications
  136. Seeing is believing: The impact of electron microscopy on autophagy research
    Eskelinen, Eeva-Liisa, Reggiori, Fulvio, Baba, Misuzu, Kovács, Attila L., Seglen, Per O. · 2011 · Autophagy
  137. Induction of autophagy by drug-resistant esophageal cancer cells promotes their survival and recovery following treatment with chemotherapeutics
    Tracey R. O’Donovan, Gerald C. O’Sullivan, Sharon L. McKenna · 2011 · Autophagy
  138. Status and opportunities for genomics research with rainbow trout
    Gary H. Thorgaard, George Bailey, David Williams, Donald R. Buhler, Stephen L. Kaattari, Sandra S. Ristow, John D. Hansen, James R. Winton, Jerri Lee Bartholomew, James J. Nagler et al. · 2002 · Comparative Biochemistry and Physiology Part B Biochemistry and Molecular Biology
  139. Atg11 Links Cargo to the Vesicle-forming Machinery in the Cytoplasm to Vacuole Targeting Pathway
    Yorimitsu, Tomohiro, Klionsky, Daniel J. · 2005 · Molecular Biology of the Cell
  140. Autophagy is an immediate macrophage response to Legionella pneumophila
    Amer, Amal O., Swanson, Michele S. · 2005 · Cellular Microbiology
  141. Autophagy is activated in pancreatic cancer cells and correlates with poor patient outcome
    Satoshi Fujii, Shuichi Mitsunaga, Manabu Yamazaki, Takahiro Hasebe, Genichiro Ishii, Motohiro Kojima, Taira Kinoshitá, Takashi Ueno, Hiroyasu Esumi, Atsushi Ochiai · 2008 · Cancer Science
  142. A method to measure cardiac autophagic flux in vivo
    Eri Iwai‐Kanai, Hua Yuan, Chengqun Huang, M. Richard Sayen, Cynthia N. Perry, Lucy Kim, Roberta A. Gottlieb · 2008 · Autophagy
  143. Flavivirus NS4A-induced Autophagy Protects Cells against Death and Enhances Virus Replication
    Jeffrey E. McLean, Aleksandra M. Wudzinska, Emmanuel Datan, Daniela Quaglino, Zahra F. Zakeri · 2011 · Journal of Biological Chemistry
  144. Association of Autophagy Defect with a Malignant Phenotype and Poor Prognosis of Hepatocellular Carcinoma
    Zhen‐Bin Ding, Ying–Hong Shi, Jian Zhou, Shuang–Jian Qiu, Yang Xu, Zhi Dai, Guo‐Ming Shi, Xiaoying Wang, Ai‐Wu Ke, Bin Wu et al. · 2008 · Cancer Research
  145. Post-translational Modifications of Three Members of the Human MAP1LC3 Family and Detection of a Novel Type of Modification for MAP1LC3B
    He, Hua, Dang, Yongjun, Dai, Fangyan, Guo, Zekun, Wu, Jiaxue, She, Xinyu, Pei, Yuan, Chen, Yongjing, Ling, Wenhai, Wu, Chaoqun et al. · 2003 · Journal of Biological Chemistry
  146. Convergence of Multiple Autophagy and Cytoplasm to Vacuole Targeting Components to a Perivacuolar Membrane Compartment Prior tode Novo Vesicle Formation
    Kim, John, Huang, Wei-Pang, Stromhaug, Per E., Klionsky, Daniel J. · 2002 · Journal of Biological Chemistry
  147. Pexophagy: The Selective Autophagy of Peroxisomes
    William A. Dunn, James M. Cregg, Jan A.K.W. Kiel, Ida J. van der Klei, Masahide Oku, Yasuyoshi Sakai, Andrei A. Sibirny, Oleh V. Stasyk, Marten Veenhuis A · 2005 · Autophagy
  148. Attenuated mTOR Signaling and Enhanced Autophagy in Adipocytes from Obese Patients with Type 2 Diabetes
    Anita Öst, Kristoffer Svensson, Iida Ruishalme, Cecilia Brännmark, Niclas Franck, Hans Krook, Per Sandström, Preben Kjølhede, Peter Strålfors · 2010 · Molecular Medicine
  149. Mitochondrially localized ERK2 regulates mitophagy and autophagic cell stress
    Ruben Karim Dagda, Jianhui Zhu, Scott M. Kulich, Charleen T. Chu · 2008 · Autophagy
  150. Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival
    Tal, Ruth, Winter, Gal, Ecker, Nitai, Klionsky, Daniel J., Abeliovich, Hagai · 2007 · Journal of Biological Chemistry
  151. A small-molecule scaffold induces autophagy in primary neurons and protects against toxicity in a Huntington disease model
    Tsvetkov, Andrey S., Miller, Jason, Arrasate, Montserrat, Wong, Jinny S., Pleiss, Michael A., Finkbeiner, Steven · 2010 · Proceedings of the National Academy of Sciences
  152. Atg9 Cycles Between Mitochondria and the Pre-Autophagosomal Structure in Yeasts
    Reggiori, Fulvio, Shintani, Takahiro, Chong, Huira, Nair, Usha, Klionsky, Daniel J. · 2005 · Autophagy
  153. A Genomic Screen for Yeast Mutants Defective in Selective Mitochondria Autophagy
    Kanki, Tomotake, Wang, Ke, Baba, Misuzu, Bartholomew, Clinton R., Lynch-Day, Melinda A., Du, Zhou, Geng, Jiefei, Mao, Kai, Yang, Zhifen, Yen, Wei-Lien et al. · 2009 · Molecular Biology of the Cell
  154. Macroautophagy inhibition sensitizes tamoxifen-resistant breast cancer cells and enhances mitochondrial depolarization
    Mohammed A. Qadir, Brian Kwok, Wieslawa H. Dragowska, Kim-Chung To, D. Le, Marcel B. Bally, Sharon M. Gorski · 2008 · Breast Cancer Research and Treatment
  155. Autophagy contributes to resistance of tumor cells to ionizing radiation
    Hassan Chaachouay, Petra Ohneseit, Mahmoud Toulany, Rainer Kehlbach, Gabriele Multhoff, H. Peter Rodemann · 2011 · Radiotherapy and Oncology
  156. Generation of cell lines with tetracycline‐regulated autophagy and a role for autophagy in controlling cell size
    Nao Hosokawa, Yukichi Hara, Noboru Mizushima · 2006 · FEBS Letters
  157. The Atg1 Kinase Complex Is Involved in the Regulation of Protein Recruitment to Initiate Sequestering Vesicle Formation for Nonspecific Autophagy inSaccharomyces cerevisiae
    Heesun Cheong, Usha Nair, Jiefei Geng, Daniel J. Klionsky · 2007 · Molecular Biology of the Cell
  158. The Parkinson-associated protein PINK1 interacts with Beclin1 and promotes autophagy
    Michiorri, S, Gelmetti, V, Giarda, E, Lombardi, F, Romano, F, Marongiu, R, Nerini-Molteni, S, Sale, P, Vago, R, Arena, G et al. · 2010 · Cell Death &amp; Differentiation
  159. Ulk1-mediated phosphorylation of AMPK constitutes a negative regulatory feedback loop
    Löffler, Antje S., Alers, Sebastian, Dieterle, Alexandra M., Keppeler, Hildegard, Franz-Wachtel, Mirita, Kundu, Mondira, Campbell, David G., Wesselborg, Sebastian, Alessi, Dario R., Stork, Björn · 2011 · Autophagy
  160. A dual role for Ca2+ in autophagy regulation
    Jean-Paul Decuypere, Geert Bultynck, Jan B. Parys · 2011 · Cell Calcium
  161. Chapter 10 Monitoring Autophagy by Electron Microscopy in Mammalian Cells
    Ylä‐Anttila, Päivi, Vihinen, Helena, Jokitalo, Eija, Eskelinen, Eeva‐Liisa · 2009 · Methods in Enzymology
  162. Induction of autophagy by drug-resistant esophageal cancer cells promotes their survival and recovery following treatment with chemotherapeutics.
    Tracey R. O’Donovan, Gerald C. O’Sullivan, Sharon L. McKenna · 2011 · PubMed
  163. Regulation of Autophagy by Sphingosine Kinase 1 and Its Role in Cell Survival during Nutrient Starvation
    Grégory Lavieu, Francesca Scarlatti, Giusy Sala, Stéphane Carpentier, Thierry Levade, Riccardo Ghidoni, Joëlle Botti, Patrice Codogno · 2006 · Journal of Biological Chemistry
  164. Involvement of aMagnaporthe griseaSerine/Threonine Kinase Gene, MgATG1, in Appressorium Turgor and Pathogenesis
    Xiaohong Liu, Jianping Lu, Lei Zhang, Bo Dong, Hang Min, Fu‐Cheng Lin · 2007 · Eukaryotic Cell
  165. NVP-BEZ235, a novel dual phosphatidylinositol 3-kinase/mammalian target of rapamycin inhibitor, elicits multifaceted antitumor activities in human gliomas
    Ta-Jen Liu, Dimpy Koul, Tiffany A. LaFortune, Ningyi Tiao, Ruijun Shen, Sauveur-Michel Maira, Carlos Garcia-Echevrria, W.K. Alfred Yung · 2009 · Molecular Cancer Therapeutics
  166. <i>Listeria monocytogenes</i>Evades Killing by Autophagy During Colonization of Host Cells
    Birmingham, Cheryl L., Canadien, Veronica, Gouin, Edith, Troy, Erin B., Yoshimori, Tamotsu, Cossart, Pascale, Higgins, Darren E., Brumell, John H. · 2007 · Autophagy
  167. Monitoring autophagic flux by an improved tandem fluorescent-tagged LC3 (mTagRFP-mWasabi-LC3) reveals that high-dose rapamycin impairs autophagic flux in cancer cells
    Cuihong Zhou, Wu Zhong, Jun Zhou, Fugeng Sheng, Ziyuan Fang, Yue Wei, Yingyu Chen, Xiaoyan Deng, Bin Xia, Jian Lin · 2012 · Autophagy
  168. Vitamin D analog EB1089 triggers dramatic lysosomal changes and Beclin 1-mediated autophagic cell death
    Maria Helena Høyer-Hansen, Lone Bastholm, Ida Stenfeldt Mathiasen, Folmer Elling, Marja Jäättelä · 2005 · Cell Death and Differentiation
  169. Autophagic degradation of dBruce controls DNA fragmentation in nurse cells during late <i>Drosophila melanogaster</i> oogenesis
    Nezis, Ioannis P., Shravage, Bhupendra V., Sagona, Antonia P., Lamark, Trond, Bjørkøy, Geir, Johansen, Terje, Rusten, Tor Erik, Brech, Andreas, Baehrecke, Eric H., Stenmark, Harald · 2010 · Journal of Cell Biology
  170. Compound C induces protective autophagy in cancer cells through AMPK inhibition-independent blockade of Akt/mTOR pathway
    Ljubica M. Vucicevic, Maja Misirkic-Marjanovic, Kristina Janjetović, Urosh Vilimanovich, Emina M. Sudar-Milovanovic, Esma R. Isenović, Marko Prica, Ljubica M. Harhaji-Trajkovic, Tamara Kravic‐Stevovic, Vladimir Z. Bumbasirevic et al. · 2010 · Autophagy
  171. Kinetics Comparisons of Mammalian Atg4 Homologues Indicate Selective Preferences toward Diverse Atg8 Substrates
    Min Li, Yifeng Hou, Jinsong Wang, Xiaoyun Chen, Zhi-Ming Shao, Xiao‐Ming Yin · 2010 · Journal of Biological Chemistry
  172. Peroxisome Degradation by Microautophagy in Pichia pastoris : Identification of Specific Steps and Morphological Intermediates
    Yasuyoshi Sakai, Antonius A. Koller, Linda K. Rangell, Gilbert A. Keller, Suresh Ellappa Subramani · 1998 · The Journal of Cell Biology
  173. Autophagic Cell Death and Its Execution by Lysosomal Cathepsins.
    UCHIYAMA, Yasuo · 2001 · Archives of Histology and Cytology
  174. The Itinerary of a Vesicle Component, Aut7p/Cvt5p, Terminates in the Yeast Vacuole via the Autophagy/Cvt Pathways
    Huang, Wei-Pang, Scott, Sidney V., Kim, John, Klionsky, Daniel J. · 2000 · Journal of Biological Chemistry
  175. Insufficient Activation of Autophagy Allows Cellular Damage to Accumulate in Critically Ill Patients
    Vanhorebeek, Ilse, Gunst, Jan, Derde, Sarah, Derese, Inge, Boussemaere, Magaly, Güiza, Fabian, Martinet, Wim, Timmermans, Jean-Pierre, D'Hoore, André, Wouters, Pieter J. et al. · 2011 · The Journal of Clinical Endocrinology &amp; Metabolism
  176. Atg21 Is a Phosphoinositide Binding Protein Required for Efficient Lipidation and Localization of Atg8 during Uptake of Aminopeptidase I by Selective Autophagy
    Per Eivind STRØMHAUG, Fulvio Reggiori, Ju Guan, Chao-Wen Wang, Daniel J. Klionsky · 2004 · Molecular Biology of the Cell
  177. Import of a Cytosolic Protein into Lysosomes by Chaperone-Mediated Autophagy depends on its Folding State
    Natalia Salvador-Montoliu, Carmen Aguado, Martin Horst, Erwin Knecht · 2000 · Journal of Biological Chemistry
  178. Membrane Recruitment of Aut7p in the Autophagy and Cytoplasm to Vacuole Targeting Pathways Requires Aut1p, Aut2p, and the Autophagy Conjugation Complex
    John Kim, Wei‐Pang Huang, Daniel J. Klionsky · 2001 · The Journal of Cell Biology
  179. SEPA-1 Mediates the Specific Recognition and Degradation of P Granule Components by Autophagy in C. elegans
    Yuxia Zhang, Libo Yan, Zhidong Zhou, Peiguo Yang, E. Tian, Kai Zhang, Yu Zhao, Zhipeng Li, Bing Song, Jinghua Han et al. · 2009 · Cell
  180. Snapin-Regulated Late Endosomal Transport Is Critical for Efficient Autophagy-Lysosomal Function in Neurons
    Qian Cai, Li Lü, Jin-Hua Tian, Yi-Bing Zhu, Haifa Qiao, Zu‐Hang Sheng · 2010 · Neuron
  181. Chapter 1 Monitoring Autophagy in Mammalian Cultured Cells through the Dynamics of LC3
    Shunsuke Kimura, Naonobu Fujita, Takeshi Noda, Tamotsu Yoshimori · 2009 · Methods in enzymology on CD-ROM/Methods in enzymology
  182. Hsp90-Cdc37 Chaperone Complex Regulates Ulk1- and Atg13-Mediated Mitophagy
    Joung Hyuck Joo, Frank Charles Dorsey, Aashish Joshi, Kristin M. Hennessy-Walters, Kristie Lindsey Rose, Kelly McCastlain, Ji Zhang, Rekha V. Iyengar, Chang Hwa Jung, Der‐Fen Suen et al. · 2011 · Molecular Cell
  183. The WD40 Repeat PtdIns(3)P-Binding Protein EPG-6 Regulates Progression of Omegasomes to Autophagosomes
    Lu, Qun, Yang, Peiguo, Huang, Xinxin, Hu, Wanqiu, Guo, Bin, Wu, Fan, Lin, Long, Kovács, Attila L., Yu, Li, Zhang, Hong · 2011 · Developmental Cell
  184. The MAP1-LC3 conjugation system is involved in lipid droplet formation
    Masahiro Shibata, Kentaro Yoshimura, Norihiko Furuya, Masato Koike, Takashi Ueno, Masaaki Komatsu, Hiroyuki Arai, Keiji Tanaka, Eiki Kominami, Yasuo Uchiyama · 2009 · Biochemical and Biophysical Research Communications
  185. Excess Peroxisomes Are Degraded by Autophagic Machinery in Mammals
    Jun-ichi Iwata, Junji Ezaki, Masaaki Komatsu, Sadaki Yokota, Takashi Ueno, Isei Tanida, Tomoki Chiba, Keiji Tanaka, Eiki Kominami · 2005 · Journal of Biological Chemistry
  186. Cytoplasmic bacteria can be targets for autophagy
    Kathryn A. Rich, Chelsea Burkett, Paul Christopher Webster · 2003 · Cellular Microbiology
  187. Temporal orchestration of circadian autophagy rhythm by C/EBPβ
    Ma, Di, Panda, Satchidananda, Lin, Jiandie D · 2011 · The EMBO Journal
  188. Apoptotic versus autophagic cell death in heart failure
    Knaapen, Michiel W.M., Davies, Michael J., De Bie, Martine, Haven, Aldwyn J., Martinet, Wim, Kockx, Mark M. · 2001 · Cardiovascular Research
  189. Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision
    Annika Spruessel, G. Steimann, Mira Jung, Sung A. Lee, Theresa Carr, Anne‐Kristin Fentz, Joerg Spangenberg, C. Zornig, Hartmut H. Juhl, Kerstin A. David · 2004 · BioTechniques
  190. Comprehensive phenotypic analysis for identification of genes affecting growth under ethanol stress inSaccharomyces cerevisiae
    Katsunori Yoshikawa, Tadamasa Tanaka, Chikara Furusawa, Keisuke Nagahisa, Takashi Hirasawa, Hiroshi Shimizu · 2008 · FEMS Yeast Research
  191. Quantitation of "autophagic flux" in mature skeletal muscle
    Ju, Jeong-Sun, Varadhachary, Arun S., Miller, Sara E., Weihl, Conrad C. · 2010 · Autophagy
  192. Novel synthetic small‐molecule activators of AMPK as enhancers of autophagy and amyloid‐β peptide degradation
    Valérie Vingtdeux, Pallavi Chandakkar, Haitian Zhao, Cristina d’Abramo, Peter Davies, Philippe Marambaud · 2010 · The FASEB Journal
  193. Aberrant Interaction between Parkinson Disease-associated Mutant UCH-L1 and the Lysosomal Receptor for Chaperone-mediated Autophagy
    Kabuta, Tomohiro, Furuta, Akiko, Aoki, Shunsuke, Furuta, Koh, Wada, Keiji · 2008 · Journal of Biological Chemistry
  194. Divergent modes of autophagy in the methylotrophic yeast Pichia pastoris
    Daniel L. Tuttle, William A. Dunn · 1995 · Journal of Cell Science
  195. Apg13p and Vac8p Are Part of a Complex of Phosphoproteins That Are Required for Cytoplasm to Vacuole Targeting
    Scott, Sidney V., Nice, Daniel C., Nau, Johnathan J., Weisman, Lois S., Kamada, Yoshiaki, Keizer-Gunnink, Ineke, Funakoshi, Tomoko, Veenhuis, Marten, Ohsumi, Yoshinori, Klionsky, Daniel J. · 2000 · Journal of Biological Chemistry
  196. Nrf2-mediated induction of p62 controls Toll-like receptor-4–driven aggresome-like induced structure formation and autophagic degradation
    Ken-ichi Fujita, Daisuke Maeda, Qi Xiao, Srinivasa Murty Srinivasula · 2011 · Proceedings of the National Academy of Sciences
  197. The Pancreatitis-induced Vacuole Membrane Protein 1 Triggers Autophagy in Mammalian Cells
    Ropolo, Alejandro, Grasso, Daniel, Pardo, Romina, Sacchetti, Maria L., Archange, Cendrine, Re, Andrea Lo, Seux, Mylene, Nowak, Jonathan, Gonzalez, Claudio D., Iovanna, Juan L. et al. · 2007 · Journal of Biological Chemistry
  198. Ubiquitinated-Protein Aggregates Form in Pancreatic β-Cells During Diabetes-Induced Oxidative Stress and Are Regulated by Autophagy
    Natalia A. Kaniuk, Michael A. Kiràly, Holly E. Bates, Mladen Vranić, Allen Volchuk, John Hunter Brumell · 2007 · Diabetes
  199. Macroautophagy Is Required for Multicellular Development of the Social Amoeba Dictyostelium discoideum
    Otto, Grant P., Wu, Mary Y., Kazgan, Nevzat, Anderson, O. Roger, Kessin, Richard H. · 2003 · Journal of Biological Chemistry
  200. Dynamics of the Degradation of Ubiquitinated Proteins by Proteasomes and Autophagy
    Natura Myeku, Maria E. Figueiredo‐Pereira · 2011 · Journal of Biological Chemistry